Protein–RNA interactions for Protein: A0A0G2JEM0

Trav3n-3, T cell receptor alpha variable 3D-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3n-3A0A0G2JEM0 Pak3-202ENSMUST00000112863 8657 ntAPPRIS ALT1 TSL 5 BASIC2.58□□□□□ -2
Trav3n-3A0A0G2JEM0 Adgre4-201ENSMUST00000025004 3491 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
Trav3n-3A0A0G2JEM0 Vmn2r49-201ENSMUST00000108550 2559 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
Trav3n-3A0A0G2JEM0 Vmn2r47-201ENSMUST00000170131 2559 ntAPPRIS P1 TSL 5 BASIC2.57□□□□□ -2
Trav3n-3A0A0G2JEM0 Vmn1r185-202ENSMUST00000226694 5656 ntAPPRIS P1 BASIC2.57□□□□□ -2
Trav3n-3A0A0G2JEM0 Gm37515-201ENSMUST00000193321 3817 ntBASIC2.57□□□□□ -2
Trav3n-3A0A0G2JEM0 AC158979.1-201ENSMUST00000223594 2252 ntBASIC2.57□□□□□ -2
Trav3n-3A0A0G2JEM0 Mir551b-201ENSMUST00000102165 98 ntBASIC2.57□□□□□ -2
Trav3n-3A0A0G2JEM0 Igkv1-133-201ENSMUST00000103304 374 ntAPPRIS P1 BASIC2.57□□□□□ -2
Trav3n-3A0A0G2JEM0 Olfr1288-201ENSMUST00000104889 939 ntAPPRIS P1 BASIC2.57□□□□□ -2
Trav3n-3A0A0G2JEM0 Gm12900-201ENSMUST00000120919 573 ntBASIC2.57□□□□□ -2
Trav3n-3A0A0G2JEM0 Olfr1027-ps1-201ENSMUST00000122338 875 ntBASIC2.57□□□□□ -2
Trav3n-3A0A0G2JEM0 Gm11280-201ENSMUST00000124912 268 ntTSL 5 BASIC2.57□□□□□ -2
Trav3n-3A0A0G2JEM0 Gm16019-201ENSMUST00000149538 261 ntTSL 5 BASIC2.57□□□□□ -2
Trav3n-3A0A0G2JEM0 1700003G18Rik-202ENSMUST00000150518 312 ntTSL 3 BASIC2.57□□□□□ -2
Trav3n-3A0A0G2JEM0 Gm24537-201ENSMUST00000157950 102 ntBASIC2.57□□□□□ -2
Trav3n-3A0A0G2JEM0 Gm22889-201ENSMUST00000158639 58 ntBASIC2.57□□□□□ -2
Trav3n-3A0A0G2JEM0 Gm22530-201ENSMUST00000158820 118 ntBASIC2.57□□□□□ -2
Trav3n-3A0A0G2JEM0 AU023070-201ENSMUST00000176972 387 ntTSL 2 BASIC2.57□□□□□ -2
Trav3n-3A0A0G2JEM0 Gm27538-201ENSMUST00000185065 294 ntBASIC2.57□□□□□ -2
Trav3n-3A0A0G2JEM0 1700020G17Rik-202ENSMUST00000190237 739 ntTSL 1 (best) BASIC2.57□□□□□ -2
Trav3n-3A0A0G2JEM0 Gm29443-202ENSMUST00000190297 410 ntTSL 3 BASIC2.57□□□□□ -2
Trav3n-3A0A0G2JEM0 Gm28877-201ENSMUST00000191349 604 ntBASIC2.57□□□□□ -2
Trav3n-3A0A0G2JEM0 Gm37616-201ENSMUST00000193974 322 ntBASIC2.57□□□□□ -2
Trav3n-3A0A0G2JEM0 Gm43559-201ENSMUST00000198755 466 ntBASIC2.57□□□□□ -2
Trav3n-3A0A0G2JEM0 Eif4e-205ENSMUST00000200100 729 ntTSL 3 BASIC2.57□□□□□ -2
Trav3n-3A0A0G2JEM0 Gm36520-201ENSMUST00000200449 400 ntTSL 3 BASIC2.57□□□□□ -2
Trav3n-3A0A0G2JEM0 E330037G11Rik-201ENSMUST00000204295 1086 ntBASIC2.57□□□□□ -2
Trav3n-3A0A0G2JEM0 Gm3829-201ENSMUST00000222362 619 ntBASIC2.57□□□□□ -2
Trav3n-3A0A0G2JEM0 Olfr824-201ENSMUST00000074161 948 ntAPPRIS P1 BASIC2.57□□□□□ -2
Trav3n-3A0A0G2JEM0 Gm10115-201ENSMUST00000076071 1228 ntBASIC2.57□□□□□ -2
Trav3n-3A0A0G2JEM0 Olfr784-201ENSMUST00000082342 960 ntAPPRIS P1 BASIC2.57□□□□□ -2
Trav3n-3A0A0G2JEM0 Rpl32-ps-201ENSMUST00000091052 506 ntBASIC2.57□□□□□ -2
Trav3n-3A0A0G2JEM0 Olfr1474-201ENSMUST00000096202 945 ntAPPRIS P1 BASIC2.57□□□□□ -2
Trav3n-3A0A0G2JEM0 Olfr1000-201ENSMUST00000099921 945 ntAPPRIS P1 BASIC2.57□□□□□ -2
Trav3n-3A0A0G2JEM0 Gm7135-202ENSMUST00000191257 1905 ntBASIC2.57□□□□□ -2
Trav3n-3A0A0G2JEM0 Olfr1288-202ENSMUST00000214816 1326 ntAPPRIS P1 TSL 5 BASIC2.57□□□□□ -2
Trav3n-3A0A0G2JEM0 4932412D23Rik-203ENSMUST00000142270 4105 ntTSL 1 (best) BASIC2.57□□□□□ -2
Trav3n-3A0A0G2JEM0 Cpa3-201ENSMUST00000001921 1449 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
Trav3n-3A0A0G2JEM0 Olfr747-204ENSMUST00000213238 1416 ntAPPRIS P1 TSL 3 BASIC2.57□□□□□ -2
Trav3n-3A0A0G2JEM0 Xiap-201ENSMUST00000026978 6834 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
Trav3n-3A0A0G2JEM0 Nexn-211ENSMUST00000199423 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC2.56□□□□□ -2
Trav3n-3A0A0G2JEM0 Gm24541-201ENSMUST00000103871 96 ntBASIC2.56□□□□□ -2
Trav3n-3A0A0G2JEM0 Gm24469-201ENSMUST00000104487 131 ntBASIC2.56□□□□□ -2
Trav3n-3A0A0G2JEM0 Gm11704-201ENSMUST00000120031 214 ntBASIC2.56□□□□□ -2
Trav3n-3A0A0G2JEM0 Spink2-202ENSMUST00000120429 594 ntTSL 1 (best) BASIC2.56□□□□□ -2
Trav3n-3A0A0G2JEM0 Gm13574-201ENSMUST00000120482 394 ntBASIC2.56□□□□□ -2
Trav3n-3A0A0G2JEM0 Zfp968-203ENSMUST00000131676 1272 ntAPPRIS P1 TSL 2 BASIC2.56□□□□□ -2
Trav3n-3A0A0G2JEM0 Gm23023-201ENSMUST00000158767 109 ntBASIC2.56□□□□□ -2
Trav3n-3A0A0G2JEM0 Gm25839-201ENSMUST00000158921 103 ntBASIC2.56□□□□□ -2
Trav3n-3A0A0G2JEM0 Gm22858-201ENSMUST00000174972 76 ntBASIC2.56□□□□□ -2
Trav3n-3A0A0G2JEM0 Gm22395-201ENSMUST00000177427 96 ntBASIC2.56□□□□□ -2
Trav3n-3A0A0G2JEM0 Gm20773-201ENSMUST00000178940 681 ntBASIC2.56□□□□□ -2
Trav3n-3A0A0G2JEM0 Gm37676-201ENSMUST00000195496 507 ntBASIC2.56□□□□□ -2
Trav3n-3A0A0G2JEM0 4930428D20Rik-201ENSMUST00000201886 546 ntTSL 1 (best) BASIC2.56□□□□□ -2
Trav3n-3A0A0G2JEM0 Gm45189-201ENSMUST00000208567 363 ntBASIC2.56□□□□□ -2
Trav3n-3A0A0G2JEM0 Gm18557-201ENSMUST00000218710 433 ntBASIC2.56□□□□□ -2
Trav3n-3A0A0G2JEM0 Gm18507-201ENSMUST00000218855 525 ntBASIC2.56□□□□□ -2
Trav3n-3A0A0G2JEM0 AC154305.1-201ENSMUST00000224443 450 ntBASIC2.56□□□□□ -2
Trav3n-3A0A0G2JEM0 Vmn1r17-202ENSMUST00000227966 912 ntAPPRIS P2 BASIC2.56□□□□□ -2
Trav3n-3A0A0G2JEM0 Gm15421-201ENSMUST00000051985 443 ntTSL 3 BASIC2.56□□□□□ -2
Trav3n-3A0A0G2JEM0 Prl2c1-201ENSMUST00000054932 681 ntAPPRIS P2 TSL 5 BASIC2.56□□□□□ -2
Trav3n-3A0A0G2JEM0 Gm10088-201ENSMUST00000074116 423 ntBASIC2.56□□□□□ -2
Trav3n-3A0A0G2JEM0 Snord22-201ENSMUST00000083153 126 ntBASIC2.56□□□□□ -2
Trav3n-3A0A0G2JEM0 Gm26176-201ENSMUST00000083795 105 ntBASIC2.56□□□□□ -2
Trav3n-3A0A0G2JEM0 Olfr1046-201ENSMUST00000099902 951 ntAPPRIS P1 BASIC2.56□□□□□ -2
Trav3n-3A0A0G2JEM0 Gm3089-201ENSMUST00000200804 1395 ntBASIC2.56□□□□□ -2
Trav3n-3A0A0G2JEM0 Gm3302-201ENSMUST00000201462 1395 ntBASIC2.56□□□□□ -2
Trav3n-3A0A0G2JEM0 Gm15679-201ENSMUST00000161244 1936 ntTSL 1 (best) BASIC2.56□□□□□ -2
Trav3n-3A0A0G2JEM0 Gm37041-201ENSMUST00000195873 3853 ntTSL 1 (best) BASIC2.56□□□□□ -2
Trav3n-3A0A0G2JEM0 Vmn1r89-208ENSMUST00000228587 2061 ntAPPRIS P2 BASIC2.56□□□□□ -2
Trav3n-3A0A0G2JEM0 Macc1-203ENSMUST00000221917 4272 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
Trav3n-3A0A0G2JEM0 Gm45304-201ENSMUST00000210303 2828 ntTSL 1 (best) BASIC2.55□□□□□ -2
Trav3n-3A0A0G2JEM0 Gm5570-202ENSMUST00000101355 2527 ntTSL 1 (best) BASIC2.55□□□□□ -2
Trav3n-3A0A0G2JEM0 Ighv1-4-201ENSMUST00000103493 351 ntAPPRIS P1 BASIC2.55□□□□□ -2
Trav3n-3A0A0G2JEM0 Trav7-2-201ENSMUST00000103636 336 ntAPPRIS P1 BASIC2.55□□□□□ -2
Trav3n-3A0A0G2JEM0 Gm14406-201ENSMUST00000108943 531 ntTSL 2 BASIC2.55□□□□□ -2
Trav3n-3A0A0G2JEM0 Hmgb1-203ENSMUST00000110505 1720 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
Trav3n-3A0A0G2JEM0 Gm11393-201ENSMUST00000118019 288 ntBASIC2.55□□□□□ -2
Trav3n-3A0A0G2JEM0 Gm4852-201ENSMUST00000121202 729 ntBASIC2.55□□□□□ -2
Trav3n-3A0A0G2JEM0 Gm12998-201ENSMUST00000122445 789 ntBASIC2.55□□□□□ -2
Trav3n-3A0A0G2JEM0 Gm11419-201ENSMUST00000150772 683 ntTSL 1 (best) BASIC2.55□□□□□ -2
Trav3n-3A0A0G2JEM0 Gm23540-201ENSMUST00000157543 164 ntBASIC2.55□□□□□ -2
Trav3n-3A0A0G2JEM0 Gm22211-201ENSMUST00000158097 156 ntBASIC2.55□□□□□ -2
Trav3n-3A0A0G2JEM0 Vmn1r-ps84-201ENSMUST00000172853 923 ntBASIC2.55□□□□□ -2
Trav3n-3A0A0G2JEM0 Obox4-ps29-201ENSMUST00000175956 1134 ntBASIC2.55□□□□□ -2
Trav3n-3A0A0G2JEM0 Gm28935-201ENSMUST00000185737 568 ntTSL 2 BASIC2.55□□□□□ -2
Trav3n-3A0A0G2JEM0 Trav17-202ENSMUST00000186545 338 ntAPPRIS ALT2 BASIC2.55□□□□□ -2
Trav3n-3A0A0G2JEM0 Gm28615-201ENSMUST00000187527 482 ntBASIC2.55□□□□□ -2
Trav3n-3A0A0G2JEM0 Gm17916-202ENSMUST00000187634 1187 ntBASIC2.55□□□□□ -2
Trav3n-3A0A0G2JEM0 Gm28641-201ENSMUST00000187783 335 ntTSL 5 BASIC2.55□□□□□ -2
Trav3n-3A0A0G2JEM0 Gm36934-201ENSMUST00000192007 306 ntBASIC2.55□□□□□ -2
Trav3n-3A0A0G2JEM0 Gm567-201ENSMUST00000197127 469 ntTSL 3 BASIC2.55□□□□□ -2
Trav3n-3A0A0G2JEM0 Trav7d-2-201ENSMUST00000200127 337 ntAPPRIS P1 BASIC2.55□□□□□ -2
Trav3n-3A0A0G2JEM0 Gm43239-201ENSMUST00000200131 201 ntBASIC2.55□□□□□ -2
Trav3n-3A0A0G2JEM0 Gm43067-201ENSMUST00000201580 445 ntTSL 3 BASIC2.55□□□□□ -2
Trav3n-3A0A0G2JEM0 Vmn1r21-202ENSMUST00000203488 1673 ntAPPRIS P1 TSL 2 BASIC2.55□□□□□ -2
Trav3n-3A0A0G2JEM0 Gm45430-201ENSMUST00000211276 260 ntTSL 5 BASIC2.55□□□□□ -2
Trav3n-3A0A0G2JEM0 AC161250.1-201ENSMUST00000213426 1111 ntBASIC2.55□□□□□ -2
Trav3n-3A0A0G2JEM0 Olfr166-202ENSMUST00000213531 4205 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
Retrieved 100 of 76,532 protein–RNA pairs in 94.9 ms