Protein–RNA interactions for Protein: Q99PQ2

Trim11, E3 ubiquitin-protein ligase TRIM11, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11Q99PQ2 Clca4c-ps-202ENSMUST00000200595 2779 ntBASIC5.85□□□□□ -1.47
Trim11Q99PQ2 Scn9a-207ENSMUST00000169900 7497 ntAPPRIS ALT2 TSL 5 BASIC5.85□□□□□ -1.47
Trim11Q99PQ2 Btbd35f23-201ENSMUST00000189190 1943 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
Trim11Q99PQ2 Vmn1r235-201ENSMUST00000060603 1781 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Trim11Q99PQ2 Hmgb1-203ENSMUST00000110505 1720 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Trim11Q99PQ2 Gprc6a-202ENSMUST00000218684 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC5.85□□□□□ -1.47
Trim11Q99PQ2 Ccr9-204ENSMUST00000168910 2888 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Trim11Q99PQ2 Vmn1r6-207ENSMUST00000228285 7950 ntAPPRIS P2 BASIC5.85□□□□□ -1.47
Trim11Q99PQ2 Olfr1307-201ENSMUST00000099604 15582 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
Trim11Q99PQ2 Ccr5-202ENSMUST00000111442 8227 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Trim11Q99PQ2 Macc1-202ENSMUST00000221866 6937 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
Trim11Q99PQ2 Gm29536-201ENSMUST00000189296 3283 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
Trim11Q99PQ2 Olfr1057-202ENSMUST00000217435 3249 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
Trim11Q99PQ2 Gm37529-201ENSMUST00000195618 4321 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
Trim11Q99PQ2 Olfr133-203ENSMUST00000215078 3130 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
Trim11Q99PQ2 Olfr13-202ENSMUST00000216179 3677 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
Trim11Q99PQ2 Nlrp1b-203ENSMUST00000108515 4131 ntAPPRIS ALT2 TSL 1 (best) BASIC5.84□□□□□ -1.47
Trim11Q99PQ2 Gm37668-201ENSMUST00000193745 1944 ntBASIC5.84□□□□□ -1.47
Trim11Q99PQ2 Akr1c14-201ENSMUST00000041768 2436 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Trim11Q99PQ2 Gabrg2-201ENSMUST00000070725 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Trim11Q99PQ2 Gm24429-201ENSMUST00000104076 132 ntBASIC5.84□□□□□ -1.47
Trim11Q99PQ2 Gm11313-201ENSMUST00000118779 432 ntBASIC5.84□□□□□ -1.47
Trim11Q99PQ2 Gm7657-201ENSMUST00000118851 666 ntBASIC5.84□□□□□ -1.47
Trim11Q99PQ2 Gm12771-201ENSMUST00000120246 135 ntBASIC5.84□□□□□ -1.47
Trim11Q99PQ2 Gm12893-201ENSMUST00000121732 275 ntBASIC5.84□□□□□ -1.47
Trim11Q99PQ2 Gm23837-201ENSMUST00000122656 286 ntBASIC5.84□□□□□ -1.47
Trim11Q99PQ2 C030037D09Rik-201ENSMUST00000125967 367 ntTSL 5 BASIC5.84□□□□□ -1.47
Trim11Q99PQ2 1700007M16Rik-201ENSMUST00000129075 435 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
Trim11Q99PQ2 Gm12602-202ENSMUST00000154352 707 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
Trim11Q99PQ2 Gm14330-201ENSMUST00000155455 455 ntTSL 5 BASIC5.84□□□□□ -1.47
Trim11Q99PQ2 Gm25362-201ENSMUST00000158854 105 ntBASIC5.84□□□□□ -1.47
Trim11Q99PQ2 Rpl9-ps5-201ENSMUST00000174221 571 ntBASIC5.84□□□□□ -1.47
Trim11Q99PQ2 Gm25194-201ENSMUST00000177987 79 ntBASIC5.84□□□□□ -1.47
Trim11Q99PQ2 Prl3c1-201ENSMUST00000018066 823 ntAPPRIS P3 TSL 1 (best) BASIC5.84□□□□□ -1.47
Trim11Q99PQ2 Mir6413-201ENSMUST00000184049 108 ntBASIC5.84□□□□□ -1.47
Trim11Q99PQ2 Gm27818-201ENSMUST00000184536 159 ntBASIC5.84□□□□□ -1.47
Trim11Q99PQ2 Gm37681-201ENSMUST00000193880 727 ntBASIC5.84□□□□□ -1.47
Trim11Q99PQ2 Gm38108-201ENSMUST00000193891 399 ntTSL 5 BASIC5.84□□□□□ -1.47
Trim11Q99PQ2 Gm37030-201ENSMUST00000194254 295 ntBASIC5.84□□□□□ -1.47
Trim11Q99PQ2 Gm37659-201ENSMUST00000194574 111 ntBASIC5.84□□□□□ -1.47
Trim11Q99PQ2 Gm36939-201ENSMUST00000194889 439 ntBASIC5.84□□□□□ -1.47
Trim11Q99PQ2 Gm33952-201ENSMUST00000197795 408 ntBASIC5.84□□□□□ -1.47
Trim11Q99PQ2 Gm45368-202ENSMUST00000210944 416 ntTSL 5 BASIC5.84□□□□□ -1.47
Trim11Q99PQ2 CAAA01216754.6-201ENSMUST00000217183 398 ntTSL 5 BASIC5.84□□□□□ -1.47
Trim11Q99PQ2 AC164567.2-201ENSMUST00000219363 445 ntBASIC5.84□□□□□ -1.47
Trim11Q99PQ2 AC157515.1-201ENSMUST00000220953 450 ntBASIC5.84□□□□□ -1.47
Trim11Q99PQ2 AC134468.2-201ENSMUST00000222549 672 ntBASIC5.84□□□□□ -1.47
Trim11Q99PQ2 Rnase12-202ENSMUST00000227764 673 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
Trim11Q99PQ2 AC154627.3-201ENSMUST00000228441 334 ntBASIC5.84□□□□□ -1.47
Trim11Q99PQ2 AC155167.1-201ENSMUST00000228931 614 ntBASIC5.84□□□□□ -1.47
Trim11Q99PQ2 Rnase12-201ENSMUST00000089798 545 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
Trim11Q99PQ2 1700008P02Rik-201ENSMUST00000091364 783 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Trim11Q99PQ2 Olfr689-202ENSMUST00000215413 5819 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
Trim11Q99PQ2 Kcnma1-204ENSMUST00000112423 3664 ntTSL 5 BASIC5.84□□□□□ -1.47
Trim11Q99PQ2 Tlr6-201ENSMUST00000062315 3677 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Trim11Q99PQ2 Gm884-201ENSMUST00000059279 10977 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.48
Trim11Q99PQ2 Vmn1r189-202ENSMUST00000227357 3245 ntAPPRIS P1 BASIC5.84□□□□□ -1.48
Trim11Q99PQ2 Gm15675-201ENSMUST00000130486 3681 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Trim11Q99PQ2 Gm37652-201ENSMUST00000195290 2095 ntBASIC5.83□□□□□ -1.48
Trim11Q99PQ2 Vmn1r87-203ENSMUST00000227443 5319 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
Trim11Q99PQ2 Prl3c1-202ENSMUST00000110364 850 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
Trim11Q99PQ2 Gm13378-201ENSMUST00000117483 336 ntBASIC5.83□□□□□ -1.48
Trim11Q99PQ2 Gm14428-201ENSMUST00000120408 822 ntBASIC5.83□□□□□ -1.48
Trim11Q99PQ2 Gm24836-201ENSMUST00000122609 108 ntBASIC5.83□□□□□ -1.48
Trim11Q99PQ2 3110004A20Rik-201ENSMUST00000123904 385 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Trim11Q99PQ2 4930597A21Rik-201ENSMUST00000128652 698 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Trim11Q99PQ2 Gm13905-201ENSMUST00000140009 579 ntTSL 3 BASIC5.83□□□□□ -1.48
Trim11Q99PQ2 Gm5699-201ENSMUST00000152491 723 ntBASIC5.83□□□□□ -1.48
Trim11Q99PQ2 Gm23465-201ENSMUST00000157134 262 ntBASIC5.83□□□□□ -1.48
Trim11Q99PQ2 Gm25425-201ENSMUST00000157611 96 ntBASIC5.83□□□□□ -1.48
Trim11Q99PQ2 Gm23965-201ENSMUST00000157969 142 ntBASIC5.83□□□□□ -1.48
Trim11Q99PQ2 Gm7609-204ENSMUST00000161424 461 ntBASIC5.83□□□□□ -1.48
Trim11Q99PQ2 Gm17430-201ENSMUST00000171339 474 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
Trim11Q99PQ2 Mir3097-201ENSMUST00000175356 67 ntBASIC5.83□□□□□ -1.48
Trim11Q99PQ2 Gm28943-201ENSMUST00000186187 615 ntBASIC5.83□□□□□ -1.48
Trim11Q99PQ2 Gm28736-201ENSMUST00000186257 615 ntBASIC5.83□□□□□ -1.48
Trim11Q99PQ2 Gm29401-201ENSMUST00000186690 615 ntBASIC5.83□□□□□ -1.48
Trim11Q99PQ2 Gm29178-204ENSMUST00000186784 615 ntBASIC5.83□□□□□ -1.48
Trim11Q99PQ2 Gm28589-201ENSMUST00000186991 615 ntBASIC5.83□□□□□ -1.48
Trim11Q99PQ2 Gm28936-201ENSMUST00000187153 615 ntBASIC5.83□□□□□ -1.48
Trim11Q99PQ2 Gm29121-201ENSMUST00000187611 615 ntBASIC5.83□□□□□ -1.48
Trim11Q99PQ2 Gm28243-201ENSMUST00000187801 615 ntBASIC5.83□□□□□ -1.48
Trim11Q99PQ2 Gm28844-202ENSMUST00000187977 615 ntBASIC5.83□□□□□ -1.48
Trim11Q99PQ2 Gm29058-201ENSMUST00000189510 615 ntBASIC5.83□□□□□ -1.48
Trim11Q99PQ2 Gm29624-201ENSMUST00000190018 615 ntBASIC5.83□□□□□ -1.48
Trim11Q99PQ2 Gm28780-201ENSMUST00000190223 615 ntBASIC5.83□□□□□ -1.48
Trim11Q99PQ2 Gm28969-211ENSMUST00000190992 615 ntBASIC5.83□□□□□ -1.48
Trim11Q99PQ2 Gm28990-207ENSMUST00000191219 615 ntBASIC5.83□□□□□ -1.48
Trim11Q99PQ2 Gm36468-201ENSMUST00000192119 615 ntBASIC5.83□□□□□ -1.48
Trim11Q99PQ2 Gm31572-201ENSMUST00000193341 615 ntBASIC5.83□□□□□ -1.48
Trim11Q99PQ2 Gm30175-201ENSMUST00000194173 615 ntBASIC5.83□□□□□ -1.48
Trim11Q99PQ2 Gm30858-201ENSMUST00000195516 615 ntBASIC5.83□□□□□ -1.48
Trim11Q99PQ2 Gm45439-201ENSMUST00000211723 359 ntBASIC5.83□□□□□ -1.48
Trim11Q99PQ2 Gm45777-201ENSMUST00000213009 301 ntBASIC5.83□□□□□ -1.48
Trim11Q99PQ2 Gm7198-201ENSMUST00000219635 1074 ntBASIC5.83□□□□□ -1.48
Trim11Q99PQ2 Il9-201ENSMUST00000022019 536 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Trim11Q99PQ2 AC125399.1-201ENSMUST00000224236 595 ntBASIC5.83□□□□□ -1.48
Trim11Q99PQ2 AC154788.1-201ENSMUST00000225003 340 ntBASIC5.83□□□□□ -1.48
Trim11Q99PQ2 S100g-201ENSMUST00000038769 480 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Trim11Q99PQ2 Defb7-201ENSMUST00000047851 306 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Retrieved 100 of 76,532 protein–RNA pairs in 68.3 ms