Protein–RNA interactions for Protein: Q99PJ2

Trim8, Probable E3 ubiquitin-protein ligase TRIM8, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim8Q99PJ2 Gm37899-201ENSMUST00000193116 8717 ntBASIC4.8□□□□□ -1.64
Trim8Q99PJ2 Zfp65-201ENSMUST00000073157 3957 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Trim8Q99PJ2 Gm42552-201ENSMUST00000196754 4497 ntBASIC4.8□□□□□ -1.64
Trim8Q99PJ2 AC112142.1-203ENSMUST00000228670 2472 ntBASIC4.8□□□□□ -1.64
Trim8Q99PJ2 AC154227.1-201ENSMUST00000228809 2467 ntBASIC4.8□□□□□ -1.64
Trim8Q99PJ2 Olfr414-202ENSMUST00000192358 4526 ntAPPRIS P1 TSL 2 BASIC4.8□□□□□ -1.64
Trim8Q99PJ2 Xkr9-201ENSMUST00000088542 1926 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Trim8Q99PJ2 2810474O19Rik-208ENSMUST00000189837 5469 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
Trim8Q99PJ2 Gm13919-202ENSMUST00000140238 1552 ntTSL 5 BASIC4.79□□□□□ -1.64
Trim8Q99PJ2 E430024I08Rik-208ENSMUST00000223312 1573 ntTSL 5 BASIC4.79□□□□□ -1.64
Trim8Q99PJ2 Ccdc152-202ENSMUST00000226261 1327 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
Trim8Q99PJ2 Gm26753-201ENSMUST00000181938 2731 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
Trim8Q99PJ2 Olfr106-ps-202ENSMUST00000214704 1791 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
Trim8Q99PJ2 Chek1-205ENSMUST00000173963 1509 ntTSL 5 BASIC4.79□□□□□ -1.64
Trim8Q99PJ2 Fam122c-201ENSMUST00000114835 745 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
Trim8Q99PJ2 Gm15312-201ENSMUST00000118827 271 ntBASIC4.79□□□□□ -1.64
Trim8Q99PJ2 Gm14517-201ENSMUST00000119040 337 ntBASIC4.79□□□□□ -1.64
Trim8Q99PJ2 Gmfg-ps-201ENSMUST00000121071 427 ntBASIC4.79□□□□□ -1.64
Trim8Q99PJ2 Gm15309-201ENSMUST00000121644 240 ntBASIC4.79□□□□□ -1.64
Trim8Q99PJ2 Gm14766-201ENSMUST00000121689 367 ntBASIC4.79□□□□□ -1.64
Trim8Q99PJ2 Rap1gapos-201ENSMUST00000135358 471 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
Trim8Q99PJ2 Gm16331-201ENSMUST00000144274 498 ntBASIC4.79□□□□□ -1.64
Trim8Q99PJ2 Gm22841-201ENSMUST00000158443 62 ntBASIC4.79□□□□□ -1.64
Trim8Q99PJ2 Rpl9-ps5-201ENSMUST00000174221 571 ntBASIC4.79□□□□□ -1.64
Trim8Q99PJ2 Mir5098-201ENSMUST00000175320 82 ntBASIC4.79□□□□□ -1.64
Trim8Q99PJ2 Obox3-ps8-201ENSMUST00000177182 960 ntBASIC4.79□□□□□ -1.64
Trim8Q99PJ2 Gm10784-201ENSMUST00000178715 238 ntBASIC4.79□□□□□ -1.64
Trim8Q99PJ2 1700010L04Rik-202ENSMUST00000178848 786 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
Trim8Q99PJ2 AV026068-202ENSMUST00000185793 486 ntTSL 2 BASIC4.79□□□□□ -1.64
Trim8Q99PJ2 Gm20162-201ENSMUST00000193629 871 ntBASIC4.79□□□□□ -1.64
Trim8Q99PJ2 Trav7d-5-201ENSMUST00000197128 340 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
Trim8Q99PJ2 7330423F06Rik-201ENSMUST00000197499 301 ntBASIC4.79□□□□□ -1.64
Trim8Q99PJ2 Igkv14-134-1-201ENSMUST00000199111 331 ntBASIC4.79□□□□□ -1.64
Trim8Q99PJ2 Gm43276-201ENSMUST00000199712 364 ntBASIC4.79□□□□□ -1.64
Trim8Q99PJ2 Trav7n-5-201ENSMUST00000199753 340 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
Trim8Q99PJ2 Gm18325-201ENSMUST00000203228 835 ntBASIC4.79□□□□□ -1.64
Trim8Q99PJ2 Gm18007-201ENSMUST00000205019 844 ntBASIC4.79□□□□□ -1.64
Trim8Q99PJ2 Gm45146-201ENSMUST00000207108 221 ntBASIC4.79□□□□□ -1.64
Trim8Q99PJ2 Gm18127-201ENSMUST00000208479 725 ntBASIC4.79□□□□□ -1.64
Trim8Q99PJ2 Olfr512-202ENSMUST00000209620 1056 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
Trim8Q99PJ2 Gm7948-201ENSMUST00000212607 844 ntBASIC4.79□□□□□ -1.64
Trim8Q99PJ2 AC160123.1-201ENSMUST00000213443 570 ntTSL 5 BASIC4.79□□□□□ -1.64
Trim8Q99PJ2 AC134334.1-201ENSMUST00000214277 255 ntBASIC4.79□□□□□ -1.64
Trim8Q99PJ2 AC087891.1-201ENSMUST00000217867 318 ntTSL 5 BASIC4.79□□□□□ -1.64
Trim8Q99PJ2 Gm40658-202ENSMUST00000221900 701 ntTSL 5 BASIC4.79□□□□□ -1.64
Trim8Q99PJ2 AC131745.2-201ENSMUST00000225736 565 ntBASIC4.79□□□□□ -1.64
Trim8Q99PJ2 AC144798.1-201ENSMUST00000228120 391 ntBASIC4.79□□□□□ -1.64
Trim8Q99PJ2 Clec2j-201ENSMUST00000032517 515 ntBASIC4.79□□□□□ -1.64
Trim8Q99PJ2 Olfr853-201ENSMUST00000058296 918 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
Trim8Q99PJ2 Olfr178-201ENSMUST00000058564 960 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
Trim8Q99PJ2 Olfr512-201ENSMUST00000074730 1056 ntBASIC4.79□□□□□ -1.64
Trim8Q99PJ2 Spink7-201ENSMUST00000076194 258 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
Trim8Q99PJ2 Defb35-201ENSMUST00000076786 267 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
Trim8Q99PJ2 Mir181a-1-201ENSMUST00000083631 87 ntBASIC4.79□□□□□ -1.64
Trim8Q99PJ2 Gm25512-201ENSMUST00000083863 107 ntBASIC4.79□□□□□ -1.64
Trim8Q99PJ2 Defb25-201ENSMUST00000099203 293 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
Trim8Q99PJ2 Ndst4-205ENSMUST00000174648 4996 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
Trim8Q99PJ2 Gm18180-201ENSMUST00000187562 1484 ntBASIC4.79□□□□□ -1.64
Trim8Q99PJ2 Olfr330-202ENSMUST00000213188 2836 ntAPPRIS P1 TSL 2 BASIC4.79□□□□□ -1.64
Trim8Q99PJ2 AC149588.1-201ENSMUST00000228274 3745 ntBASIC4.79□□□□□ -1.64
Trim8Q99PJ2 Olfr699-203ENSMUST00000216307 4193 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
Trim8Q99PJ2 Pramel3-202ENSMUST00000118821 3698 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
Trim8Q99PJ2 Vmn1r84-205ENSMUST00000228653 2769 ntAPPRIS ALT2 BASIC4.79□□□□□ -1.64
Trim8Q99PJ2 Gm5570-202ENSMUST00000101355 2527 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
Trim8Q99PJ2 Gm40909-202ENSMUST00000223275 5564 ntTSL 5 BASIC4.79□□□□□ -1.64
Trim8Q99PJ2 Ifi203-203ENSMUST00000123708 3482 ntAPPRIS P3 TSL 1 (best) BASIC4.78□□□□□ -1.64
Trim8Q99PJ2 Olfr111-202ENSMUST00000214259 2620 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
Trim8Q99PJ2 Fam46d-204ENSMUST00000167154 3004 ntAPPRIS P1 TSL 3 BASIC4.78□□□□□ -1.64
Trim8Q99PJ2 Olfr556-202ENSMUST00000213485 3825 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
Trim8Q99PJ2 Gm44789-201ENSMUST00000207195 3101 ntBASIC4.78□□□□□ -1.64
Trim8Q99PJ2 Vmn1r14-204ENSMUST00000227768 7005 ntAPPRIS P2 BASIC4.78□□□□□ -1.64
Trim8Q99PJ2 Igkv6-15-201ENSMUST00000103393 347 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
Trim8Q99PJ2 Gm25419-201ENSMUST00000104215 191 ntBASIC4.78□□□□□ -1.64
Trim8Q99PJ2 Gm24608-201ENSMUST00000104381 136 ntBASIC4.78□□□□□ -1.64
Trim8Q99PJ2 Gm15140-201ENSMUST00000112565 984 ntAPPRIS P1 TSL 2 BASIC4.78□□□□□ -1.64
Trim8Q99PJ2 Mir1188-201ENSMUST00000116756 120 ntBASIC4.78□□□□□ -1.64
Trim8Q99PJ2 Gm14670-201ENSMUST00000117327 337 ntBASIC4.78□□□□□ -1.64
Trim8Q99PJ2 Gm11631-201ENSMUST00000119220 156 ntBASIC4.78□□□□□ -1.64
Trim8Q99PJ2 Gm22208-201ENSMUST00000122658 110 ntBASIC4.78□□□□□ -1.64
Trim8Q99PJ2 Xaf1-202ENSMUST00000140842 651 ntTSL 3 BASIC4.78□□□□□ -1.64
Trim8Q99PJ2 Gm10057-201ENSMUST00000144098 984 ntAPPRIS P1 TSL 2 BASIC4.78□□□□□ -1.64
Trim8Q99PJ2 Gm12226-201ENSMUST00000144172 876 ntBASIC4.78□□□□□ -1.64
Trim8Q99PJ2 Gm13775-201ENSMUST00000153865 751 ntTSL 3 BASIC4.78□□□□□ -1.64
Trim8Q99PJ2 Gm23965-201ENSMUST00000157969 142 ntBASIC4.78□□□□□ -1.64
Trim8Q99PJ2 Gm25434-201ENSMUST00000158278 167 ntBASIC4.78□□□□□ -1.64
Trim8Q99PJ2 Gm26173-201ENSMUST00000158416 136 ntBASIC4.78□□□□□ -1.64
Trim8Q99PJ2 Ighv5-8-201ENSMUST00000166255 278 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
Trim8Q99PJ2 Gm3084-201ENSMUST00000169967 598 ntBASIC4.78□□□□□ -1.64
Trim8Q99PJ2 Gm7335-201ENSMUST00000172475 373 ntBASIC4.78□□□□□ -1.64
Trim8Q99PJ2 4921511M17Rik-201ENSMUST00000177994 984 ntAPPRIS P1 TSL 2 BASIC4.78□□□□□ -1.64
Trim8Q99PJ2 Samt1-201ENSMUST00000178342 984 ntAPPRIS P1 TSL 2 BASIC4.78□□□□□ -1.64
Trim8Q99PJ2 Samt1-202ENSMUST00000178698 834 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
Trim8Q99PJ2 Gm4617-201ENSMUST00000178993 331 ntBASIC4.78□□□□□ -1.64
Trim8Q99PJ2 4921511M17Rik-202ENSMUST00000179369 834 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
Trim8Q99PJ2 Gm7173-203ENSMUST00000179788 1254 ntTSL 5 BASIC4.78□□□□□ -1.64
Trim8Q99PJ2 Gm3543-202ENSMUST00000179947 231 ntTSL 5 BASIC4.78□□□□□ -1.64
Trim8Q99PJ2 Gm22307-201ENSMUST00000180019 107 ntBASIC4.78□□□□□ -1.64
Trim8Q99PJ2 Anks1b-207ENSMUST00000182045 544 ntTSL 3 BASIC4.78□□□□□ -1.64
Trim8Q99PJ2 Gm37828-201ENSMUST00000192496 432 ntBASIC4.78□□□□□ -1.64
Trim8Q99PJ2 4921527H02Rik-202ENSMUST00000196005 947 ntBASIC4.78□□□□□ -1.64
Retrieved 100 of 76,532 protein–RNA pairs in 71.9 ms