Protein–RNA interactions for Protein: Q99MA9

Nkx6-1, Homeobox protein Nkx-6.1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-1Q99MA9 Zbed4-ps1-201ENSMUST00000186734 3466 ntBASIC4.97□□□□□ -1.61
Nkx6-1Q99MA9 Fgf7-202ENSMUST00000110442 2287 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
Nkx6-1Q99MA9 Nxf7-201ENSMUST00000033784 1863 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
Nkx6-1Q99MA9 Gm7919-201ENSMUST00000202043 1389 ntBASIC4.97□□□□□ -1.61
Nkx6-1Q99MA9 Txndc8-201ENSMUST00000102897 620 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
Nkx6-1Q99MA9 Gm22266-201ENSMUST00000104011 138 ntBASIC4.97□□□□□ -1.61
Nkx6-1Q99MA9 4930444P10Rik-201ENSMUST00000115367 868 ntAPPRIS ALT2 TSL 5 BASIC4.97□□□□□ -1.61
Nkx6-1Q99MA9 Gm12854-201ENSMUST00000128518 297 ntBASIC4.97□□□□□ -1.61
Nkx6-1Q99MA9 9030622O22Rik-201ENSMUST00000129082 1245 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
Nkx6-1Q99MA9 Gm15905-201ENSMUST00000137042 298 ntBASIC4.97□□□□□ -1.61
Nkx6-1Q99MA9 Gm13348-201ENSMUST00000147324 690 ntTSL 5 BASIC4.97□□□□□ -1.61
Nkx6-1Q99MA9 Gm24060-201ENSMUST00000157494 95 ntBASIC4.97□□□□□ -1.61
Nkx6-1Q99MA9 Mir1945-201ENSMUST00000157919 78 ntBASIC4.97□□□□□ -1.61
Nkx6-1Q99MA9 Gm7925-201ENSMUST00000166690 401 ntBASIC4.97□□□□□ -1.61
Nkx6-1Q99MA9 Esp4-201ENSMUST00000178498 553 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
Nkx6-1Q99MA9 Gm25671-201ENSMUST00000178612 105 ntBASIC4.97□□□□□ -1.61
Nkx6-1Q99MA9 Gm23191-201ENSMUST00000179147 107 ntBASIC4.97□□□□□ -1.61
Nkx6-1Q99MA9 Gm23307-201ENSMUST00000179167 105 ntBASIC4.97□□□□□ -1.61
Nkx6-1Q99MA9 Gm25286-201ENSMUST00000179790 105 ntBASIC4.97□□□□□ -1.61
Nkx6-1Q99MA9 Mir6393-201ENSMUST00000183709 94 ntBASIC4.97□□□□□ -1.61
Nkx6-1Q99MA9 Gm27193-201ENSMUST00000184217 586 ntBASIC4.97□□□□□ -1.61
Nkx6-1Q99MA9 Gm27385-201ENSMUST00000184747 104 ntBASIC4.97□□□□□ -1.61
Nkx6-1Q99MA9 Gm4854-201ENSMUST00000185902 574 ntBASIC4.97□□□□□ -1.61
Nkx6-1Q99MA9 4930553J12Rik-202ENSMUST00000187823 851 ntBASIC4.97□□□□□ -1.61
Nkx6-1Q99MA9 BE692007-203ENSMUST00000189306 362 ntTSL 3 BASIC4.97□□□□□ -1.61
Nkx6-1Q99MA9 Gm36548-201ENSMUST00000197473 685 ntTSL 5 BASIC4.97□□□□□ -1.61
Nkx6-1Q99MA9 Gm45367-201ENSMUST00000210171 347 ntBASIC4.97□□□□□ -1.61
Nkx6-1Q99MA9 Gm45735-201ENSMUST00000212779 319 ntBASIC4.97□□□□□ -1.61
Nkx6-1Q99MA9 AC123067.1-201ENSMUST00000217711 462 ntBASIC4.97□□□□□ -1.61
Nkx6-1Q99MA9 CT485612.2-201ENSMUST00000223014 151 ntBASIC4.97□□□□□ -1.61
Nkx6-1Q99MA9 AL672194.1-201ENSMUST00000224841 603 ntBASIC4.97□□□□□ -1.61
Nkx6-1Q99MA9 CT025525.4-201ENSMUST00000227728 277 ntBASIC4.97□□□□□ -1.61
Nkx6-1Q99MA9 AC125539.2-202ENSMUST00000227983 587 ntBASIC4.97□□□□□ -1.61
Nkx6-1Q99MA9 U90926-201ENSMUST00000031356 520 ntAPPRIS ALT2 TSL 5 BASIC4.97□□□□□ -1.61
Nkx6-1Q99MA9 Olfr474-201ENSMUST00000054434 933 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
Nkx6-1Q99MA9 Rps11-ps4-201ENSMUST00000062226 474 ntBASIC4.97□□□□□ -1.61
Nkx6-1Q99MA9 Gm7665-201ENSMUST00000076710 297 ntBASIC4.97□□□□□ -1.61
Nkx6-1Q99MA9 Snord42a-201ENSMUST00000082606 65 ntBASIC4.97□□□□□ -1.61
Nkx6-1Q99MA9 Trim6-201ENSMUST00000098180 3827 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
Nkx6-1Q99MA9 Fpgt-201ENSMUST00000066568 3518 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
Nkx6-1Q99MA9 Rev3l-207ENSMUST00000164763 10399 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
Nkx6-1Q99MA9 Gm32592-201ENSMUST00000205146 3124 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
Nkx6-1Q99MA9 Vmn2r95-201ENSMUST00000166327 2538 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
Nkx6-1Q99MA9 Gm15337-201ENSMUST00000135378 3888 ntTSL 5 BASIC4.97□□□□□ -1.61
Nkx6-1Q99MA9 Btbd35f2-201ENSMUST00000179991 1949 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
Nkx6-1Q99MA9 A730081D07Rik-201ENSMUST00000153685 1804 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
Nkx6-1Q99MA9 Gm37551-201ENSMUST00000195556 2861 ntBASIC4.97□□□□□ -1.61
Nkx6-1Q99MA9 Gm43389-201ENSMUST00000196080 2595 ntBASIC4.97□□□□□ -1.61
Nkx6-1Q99MA9 AC162908.1-201ENSMUST00000219164 4563 ntBASIC4.97□□□□□ -1.61
Nkx6-1Q99MA9 Gm37628-201ENSMUST00000194644 5440 ntBASIC4.97□□□□□ -1.61
Nkx6-1Q99MA9 Vmn2r88-204ENSMUST00000228139 3227 ntAPPRIS ALT2 BASIC4.97□□□□□ -1.61
Nkx6-1Q99MA9 Nsd1-201ENSMUST00000099490 12784 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
Nkx6-1Q99MA9 Zfp143-201ENSMUST00000084727 3003 ntAPPRIS ALT1 TSL 1 (best) BASIC4.97□□□□□ -1.61
Nkx6-1Q99MA9 Cbx5-202ENSMUST00000118152 8803 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.61
Nkx6-1Q99MA9 Ereg-201ENSMUST00000031324 4128 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.61
Nkx6-1Q99MA9 Gm44829-201ENSMUST00000208008 3193 ntBASIC4.96□□□□□ -1.61
Nkx6-1Q99MA9 Rmi1-204ENSMUST00000225815 2447 ntAPPRIS P1 BASIC4.96□□□□□ -1.61
Nkx6-1Q99MA9 Tbl1xr1-201ENSMUST00000063988 6667 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
Nkx6-1Q99MA9 Gm38212-201ENSMUST00000194081 2756 ntBASIC4.96□□□□□ -1.62
Nkx6-1Q99MA9 AC141438.1-201ENSMUST00000216055 3205 ntTSL 2 BASIC4.96□□□□□ -1.62
Nkx6-1Q99MA9 Olfr644-202ENSMUST00000213184 3572 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.62
Nkx6-1Q99MA9 Tgtp2-201ENSMUST00000046745 2810 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
Nkx6-1Q99MA9 Trav6n-6-201ENSMUST00000103613 287 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
Nkx6-1Q99MA9 Trav15-1-dv6-1-201ENSMUST00000103653 349 ntAPPRIS ALT2 BASIC4.96□□□□□ -1.62
Nkx6-1Q99MA9 Gm11020-201ENSMUST00000109447 186 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.62
Nkx6-1Q99MA9 Gm11633-201ENSMUST00000118176 444 ntBASIC4.96□□□□□ -1.62
Nkx6-1Q99MA9 Gm12495-201ENSMUST00000119750 447 ntBASIC4.96□□□□□ -1.62
Nkx6-1Q99MA9 Gm4852-201ENSMUST00000121202 729 ntBASIC4.96□□□□□ -1.62
Nkx6-1Q99MA9 Gm15381-201ENSMUST00000121501 1156 ntBASIC4.96□□□□□ -1.62
Nkx6-1Q99MA9 Gm13214-201ENSMUST00000122137 408 ntBASIC4.96□□□□□ -1.62
Nkx6-1Q99MA9 Gm14271-201ENSMUST00000137886 630 ntTSL 3 BASIC4.96□□□□□ -1.62
Nkx6-1Q99MA9 Gm16212-202ENSMUST00000143555 420 ntTSL 3 BASIC4.96□□□□□ -1.62
Nkx6-1Q99MA9 4933406D12Rik-201ENSMUST00000147212 737 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
Nkx6-1Q99MA9 Gm24188-201ENSMUST00000157980 108 ntBASIC4.96□□□□□ -1.62
Nkx6-1Q99MA9 Gm22940-201ENSMUST00000158560 155 ntBASIC4.96□□□□□ -1.62
Nkx6-1Q99MA9 Gm20468-201ENSMUST00000172664 452 ntTSL 3 BASIC4.96□□□□□ -1.62
Nkx6-1Q99MA9 Gm23977-201ENSMUST00000177871 74 ntBASIC4.96□□□□□ -1.62
Nkx6-1Q99MA9 RMST_1.1-201ENSMUST00000182623 407 ntTSL 2 BASIC4.96□□□□□ -1.62
Nkx6-1Q99MA9 Gm43115-201ENSMUST00000196244 160 ntBASIC4.96□□□□□ -1.62
Nkx6-1Q99MA9 Rho-205ENSMUST00000203877 939 ntTSL 2 BASIC4.96□□□□□ -1.62
Nkx6-1Q99MA9 Gm44074-201ENSMUST00000204562 337 ntBASIC4.96□□□□□ -1.62
Nkx6-1Q99MA9 Gm45455-202ENSMUST00000211156 630 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
Nkx6-1Q99MA9 Gm45422-201ENSMUST00000211476 246 ntBASIC4.96□□□□□ -1.62
Nkx6-1Q99MA9 Prl4a1-201ENSMUST00000021779 876 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
Nkx6-1Q99MA9 CT571268.1-201ENSMUST00000222320 407 ntBASIC4.96□□□□□ -1.62
Nkx6-1Q99MA9 AC154521.1-201ENSMUST00000222635 330 ntBASIC4.96□□□□□ -1.62
Nkx6-1Q99MA9 CT030705.1-201ENSMUST00000223971 533 ntBASIC4.96□□□□□ -1.62
Nkx6-1Q99MA9 AC132112.1-201ENSMUST00000226354 505 ntBASIC4.96□□□□□ -1.62
Nkx6-1Q99MA9 AC098719.1-201ENSMUST00000228920 371 ntBASIC4.96□□□□□ -1.62
Nkx6-1Q99MA9 Gm6104-201ENSMUST00000078030 603 ntBASIC4.96□□□□□ -1.62
Nkx6-1Q99MA9 n-R5s88-201ENSMUST00000083173 118 ntBASIC4.96□□□□□ -1.62
Nkx6-1Q99MA9 Gm6177-201ENSMUST00000085589 465 ntBASIC4.96□□□□□ -1.62
Nkx6-1Q99MA9 Gnal-202ENSMUST00000076605 5223 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
Nkx6-1Q99MA9 Gm37846-201ENSMUST00000191840 3774 ntBASIC4.96□□□□□ -1.62
Nkx6-1Q99MA9 Vmn1r6-203ENSMUST00000227131 8330 ntAPPRIS P2 BASIC4.96□□□□□ -1.62
Nkx6-1Q99MA9 Ehf-201ENSMUST00000090475 4469 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
Nkx6-1Q99MA9 Senp8-202ENSMUST00000163586 3570 ntAPPRIS P3 TSL 1 (best) BASIC4.96□□□□□ -1.62
Nkx6-1Q99MA9 AC108802.1-201ENSMUST00000219501 3142 ntBASIC4.96□□□□□ -1.62
Nkx6-1Q99MA9 Olfr736-204ENSMUST00000215227 2485 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.62
Nkx6-1Q99MA9 Gm3675-201ENSMUST00000175904 1653 ntBASIC4.96□□□□□ -1.62
Retrieved 100 of 76,532 protein–RNA pairs in 75.2 ms