Protein–RNA interactions for Protein: Q8C006

Trim35, Tripartite motif-containing protein 35, mousemouse

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim35Q8C006 Cx3cr1-203ENSMUST00000215016 4493 ntAPPRIS P1 TSL 5 BASIC6.94□□□□□ -1.3
Trim35Q8C006 Scaper-202ENSMUST00000214747 5231 ntAPPRIS ALT2 TSL 5 BASIC6.94□□□□□ -1.3
Trim35Q8C006 4931406B18Rik-203ENSMUST00000163619 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC6.94□□□□□ -1.3
Trim35Q8C006 Tgtp1-201ENSMUST00000068063 2823 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Trim35Q8C006 Gm15518-201ENSMUST00000127115 2108 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
Trim35Q8C006 Gbp9-201ENSMUST00000031238 4381 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Trim35Q8C006 Dthd1-201ENSMUST00000170704 2427 ntAPPRIS P1 TSL 5 BASIC6.93□□□□□ -1.3
Trim35Q8C006 Vmn1r34-203ENSMUST00000226910 2982 ntAPPRIS P1 BASIC6.93□□□□□ -1.3
Trim35Q8C006 Prcp-201ENSMUST00000076052 2967 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
Trim35Q8C006 Gm38082-201ENSMUST00000192800 6882 ntBASIC6.93□□□□□ -1.3
Trim35Q8C006 Gm8113-201ENSMUST00000160298 2721 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
Trim35Q8C006 Gm45129-201ENSMUST00000208444 2224 ntBASIC6.93□□□□□ -1.3
Trim35Q8C006 Xpnpep3-203ENSMUST00000163754 5383 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
Trim35Q8C006 Dlgap5-208ENSMUST00000180299 4067 ntAPPRIS ALT2 TSL 2 BASIC6.93□□□□□ -1.3
Trim35Q8C006 Olfr1309-204ENSMUST00000215045 5236 ntAPPRIS P1 TSL 5 BASIC6.93□□□□□ -1.3
Trim35Q8C006 Vmn2r116-201ENSMUST00000164856 2571 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
Trim35Q8C006 Gm43197-201ENSMUST00000201493 2583 ntBASIC6.93□□□□□ -1.3
Trim35Q8C006 Cep85l-201ENSMUST00000095691 2560 ntAPPRIS ALT2 TSL 5 BASIC6.93□□□□□ -1.3
Trim35Q8C006 Vmn2r112-201ENSMUST00000097381 2574 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
Trim35Q8C006 Gbp4-201ENSMUST00000100962 4538 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
Trim35Q8C006 Cldn12-202ENSMUST00000115445 3477 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
Trim35Q8C006 Gm4788-202ENSMUST00000111986 2935 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
Trim35Q8C006 A930004J17Rik-201ENSMUST00000192689 4610 ntBASIC6.93□□□□□ -1.3
Trim35Q8C006 Mir147-201ENSMUST00000102354 79 ntBASIC6.93□□□□□ -1.3
Trim35Q8C006 n-R5s72-201ENSMUST00000104518 119 ntBASIC6.93□□□□□ -1.3
Trim35Q8C006 Gm25560-201ENSMUST00000104606 176 ntBASIC6.93□□□□□ -1.3
Trim35Q8C006 Gm13006-201ENSMUST00000118683 214 ntBASIC6.93□□□□□ -1.3
Trim35Q8C006 Gm12740-201ENSMUST00000118794 308 ntBASIC6.93□□□□□ -1.3
Trim35Q8C006 Gm14551-201ENSMUST00000120802 256 ntBASIC6.93□□□□□ -1.3
Trim35Q8C006 Gm11257-201ENSMUST00000121313 315 ntBASIC6.93□□□□□ -1.3
Trim35Q8C006 Gm13797-201ENSMUST00000121792 120 ntBASIC6.93□□□□□ -1.3
Trim35Q8C006 Gm15835-201ENSMUST00000127697 356 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
Trim35Q8C006 Gm2709-201ENSMUST00000142979 350 ntBASIC6.93□□□□□ -1.3
Trim35Q8C006 Gm17212-201ENSMUST00000166666 259 ntBASIC6.93□□□□□ -1.3
Trim35Q8C006 Gm20461-201ENSMUST00000174600 305 ntTSL 3 BASIC6.93□□□□□ -1.3
Trim35Q8C006 Mir6241-201ENSMUST00000184225 103 ntBASIC6.93□□□□□ -1.3
Trim35Q8C006 Gm7266-201ENSMUST00000187999 405 ntBASIC6.93□□□□□ -1.3
Trim35Q8C006 Gm43495-201ENSMUST00000200060 205 ntTSL 5 BASIC6.93□□□□□ -1.3
Trim35Q8C006 Gm44583-201ENSMUST00000207478 281 ntBASIC6.93□□□□□ -1.3
Trim35Q8C006 AC121788.1-201ENSMUST00000218514 1046 ntTSL 5 BASIC6.93□□□□□ -1.3
Trim35Q8C006 Gm30034-201ENSMUST00000219589 248 ntTSL 5 BASIC6.93□□□□□ -1.3
Trim35Q8C006 AC156559.1-201ENSMUST00000224158 222 ntBASIC6.93□□□□□ -1.3
Trim35Q8C006 CT485608.1-201ENSMUST00000228759 389 ntBASIC6.93□□□□□ -1.3
Trim35Q8C006 Rps15a-ps1-201ENSMUST00000071120 393 ntBASIC6.93□□□□□ -1.3
Trim35Q8C006 Olfr802-203ENSMUST00000217576 5297 ntAPPRIS P1 TSL 5 BASIC6.93□□□□□ -1.3
Trim35Q8C006 Zfp473-204ENSMUST00000120798 3559 ntAPPRIS ALT2 TSL 1 (best) BASIC6.93□□□□□ -1.3
Trim35Q8C006 AC163660.4-201ENSMUST00000224983 2171 ntBASIC6.93□□□□□ -1.3
Trim35Q8C006 AC156163.1-201ENSMUST00000215598 3369 ntBASIC6.93□□□□□ -1.3
Trim35Q8C006 Pde10a-207ENSMUST00000115722 3673 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
Trim35Q8C006 Rc3h2-201ENSMUST00000100143 8799 ntAPPRIS P1 TSL 5 BASIC6.93□□□□□ -1.3
Trim35Q8C006 Skil-201ENSMUST00000029194 6717 ntAPPRIS P3 TSL 5 BASIC6.93□□□□□ -1.3
Trim35Q8C006 Gm13101-201ENSMUST00000105763 1678 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
Trim35Q8C006 Gm43876-201ENSMUST00000203831 3229 ntBASIC6.93□□□□□ -1.3
Trim35Q8C006 Olfr361-203ENSMUST00000216663 2617 ntAPPRIS P1 TSL 5 BASIC6.93□□□□□ -1.3
Trim35Q8C006 Catsperg1-201ENSMUST00000047846 3566 ntTSL 5 BASIC6.93□□□□□ -1.3
Trim35Q8C006 Pigc-202ENSMUST00000111594 3290 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
Trim35Q8C006 Pja2-201ENSMUST00000024888 4531 ntAPPRIS P4 TSL 5 BASIC6.93□□□□□ -1.3
Trim35Q8C006 Sytl4-203ENSMUST00000113297 3306 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
Trim35Q8C006 Ckap5-202ENSMUST00000099716 6574 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
Trim35Q8C006 Ptpra-202ENSMUST00000077303 3066 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
Trim35Q8C006 Aox1-201ENSMUST00000001027 4423 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
Trim35Q8C006 Gm43789-201ENSMUST00000199275 2472 ntBASIC6.92□□□□□ -1.3
Trim35Q8C006 Atp6v0d2-201ENSMUST00000029900 2539 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
Trim35Q8C006 Olfr716-204ENSMUST00000213367 3585 ntAPPRIS P1 TSL 5 BASIC6.92□□□□□ -1.3
Trim35Q8C006 Prokr2-204ENSMUST00000142766 3932 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
Trim35Q8C006 Syn3-202ENSMUST00000121789 4006 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
Trim35Q8C006 Fancd2-208ENSMUST00000204827 4707 ntAPPRIS ALT2 TSL 1 (best) BASIC6.92□□□□□ -1.3
Trim35Q8C006 Olfr1467-202ENSMUST00000215096 3671 ntAPPRIS P1 TSL 5 BASIC6.92□□□□□ -1.3
Trim35Q8C006 Mad2l1-202ENSMUST00000116605 7557 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
Trim35Q8C006 Ube4a-202ENSMUST00000117549 3415 ntAPPRIS P1 TSL 5 BASIC6.92□□□□□ -1.3
Trim35Q8C006 Cul4b-202ENSMUST00000050083 3090 ntAPPRIS P2 TSL 1 (best) BASIC6.92□□□□□ -1.3
Trim35Q8C006 Gm26419-201ENSMUST00000104272 133 ntBASIC6.92□□□□□ -1.3
Trim35Q8C006 Gm26417-201ENSMUST00000104274 135 ntBASIC6.92□□□□□ -1.3
Trim35Q8C006 Gm22051-201ENSMUST00000117002 127 ntBASIC6.92□□□□□ -1.3
Trim35Q8C006 Gm12535-201ENSMUST00000121025 484 ntBASIC6.92□□□□□ -1.3
Trim35Q8C006 Gm22345-201ENSMUST00000122644 107 ntBASIC6.92□□□□□ -1.3
Trim35Q8C006 Gm22024-201ENSMUST00000122733 287 ntBASIC6.92□□□□□ -1.3
Trim35Q8C006 Gm16093-201ENSMUST00000141455 392 ntTSL 5 BASIC6.92□□□□□ -1.3
Trim35Q8C006 Gm26323-201ENSMUST00000157743 175 ntBASIC6.92□□□□□ -1.3
Trim35Q8C006 Gm24634-201ENSMUST00000158672 107 ntBASIC6.92□□□□□ -1.3
Trim35Q8C006 Gm24680-201ENSMUST00000158759 126 ntBASIC6.92□□□□□ -1.3
Trim35Q8C006 Gm16028-201ENSMUST00000162347 890 ntTSL 5 BASIC6.92□□□□□ -1.3
Trim35Q8C006 Mir7669-201ENSMUST00000183442 58 ntBASIC6.92□□□□□ -1.3
Trim35Q8C006 2810025M15Rik-203ENSMUST00000189791 251 ntBASIC6.92□□□□□ -1.3
Trim35Q8C006 Gm20203-201ENSMUST00000192352 332 ntBASIC6.92□□□□□ -1.3
Trim35Q8C006 Igkv4-56-201ENSMUST00000198436 349 ntBASIC6.92□□□□□ -1.3
Trim35Q8C006 Gm36758-201ENSMUST00000222594 310 ntBASIC6.92□□□□□ -1.3
Trim35Q8C006 CT030195.1-201ENSMUST00000223887 378 ntBASIC6.92□□□□□ -1.3
Trim35Q8C006 Gm22283-201ENSMUST00000082556 161 ntBASIC6.92□□□□□ -1.3
Trim35Q8C006 Mir34c-201ENSMUST00000083653 77 ntBASIC6.92□□□□□ -1.3
Trim35Q8C006 Gm10799-201ENSMUST00000099666 312 ntAPPRIS P1 TSL 5 BASIC6.92□□□□□ -1.3
Trim35Q8C006 Il1rapl1-201ENSMUST00000078875 2091 ntAPPRIS P1 TSL 5 BASIC6.92□□□□□ -1.3
Trim35Q8C006 Impg2-204ENSMUST00000160116 3992 ntAPPRIS ALT2 TSL 1 (best) BASIC6.92□□□□□ -1.3
Trim35Q8C006 Rgs22-203ENSMUST00000172831 4006 ntAPPRIS P1 TSL 5 BASIC6.92□□□□□ -1.3
Trim35Q8C006 Nxpe4-203ENSMUST00000216998 4871 ntAPPRIS ALT2 TSL 2 BASIC6.92□□□□□ -1.3
Trim35Q8C006 Lpin1-204ENSMUST00000221230 4114 ntAPPRIS ALT2 TSL 1 (best) BASIC6.92□□□□□ -1.3
Trim35Q8C006 Olfr571-202ENSMUST00000214160 4999 ntAPPRIS P1 TSL 5 BASIC6.92□□□□□ -1.3
Trim35Q8C006 Inpp5f-208ENSMUST00000151237 2609 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
Trim35Q8C006 Zim1-201ENSMUST00000002336 7693 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
Trim35Q8C006 B530045E10Rik-202ENSMUST00000189035 3138 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
Retrieved 100 of 76,532 protein–RNA pairs in 81.1 ms