Protein–RNA interactions for Protein: Q811S7

Ubp1, Upstream-binding protein 1, mousemouse

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubp1Q811S7 AC119241.1-201ENSMUST00000223651 534 ntBASIC5.46□□□□□ -1.54
Ubp1Q811S7 AC161383.1-201ENSMUST00000227356 527 ntBASIC5.46□□□□□ -1.54
Ubp1Q811S7 S100a11-201ENSMUST00000029515 511 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
Ubp1Q811S7 Gm23406-201ENSMUST00000082537 122 ntBASIC5.46□□□□□ -1.54
Ubp1Q811S7 n-R5s204-201ENSMUST00000082972 119 ntBASIC5.46□□□□□ -1.54
Ubp1Q811S7 Olfr243-201ENSMUST00000098194 951 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
Ubp1Q811S7 Clca4b-201ENSMUST00000098549 2997 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
Ubp1Q811S7 Gm813-201ENSMUST00000099663 702 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
Ubp1Q811S7 Tmem207-201ENSMUST00000165687 1538 ntAPPRIS P1 TSL 2 BASIC5.46□□□□□ -1.54
Ubp1Q811S7 Vmn1r71-201ENSMUST00000079113 4996 ntAPPRIS P2 BASIC5.46□□□□□ -1.54
Ubp1Q811S7 9430007A20Rik-201ENSMUST00000030328 1406 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
Ubp1Q811S7 Cnot1-202ENSMUST00000098473 8390 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.54
Ubp1Q811S7 Gm43175-201ENSMUST00000198450 3810 ntBASIC5.46□□□□□ -1.54
Ubp1Q811S7 Olfr739-202ENSMUST00000216949 3581 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.54
Ubp1Q811S7 Tbc1d32-201ENSMUST00000099739 7240 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.54
Ubp1Q811S7 Gm14910-201ENSMUST00000121037 1805 ntBASIC5.46□□□□□ -1.54
Ubp1Q811S7 CT009733.2-202ENSMUST00000224171 4748 ntBASIC5.46□□□□□ -1.54
Ubp1Q811S7 Gm43312-201ENSMUST00000201655 2466 ntBASIC5.46□□□□□ -1.54
Ubp1Q811S7 Olfr988-202ENSMUST00000111597 1702 ntAPPRIS P1 TSL 3 BASIC5.45□□□□□ -1.54
Ubp1Q811S7 Lrp2bp-203ENSMUST00000110381 3421 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
Ubp1Q811S7 AC159193.1-201ENSMUST00000222872 2517 ntBASIC5.45□□□□□ -1.54
Ubp1Q811S7 Olfr446-204ENSMUST00000216199 4218 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
Ubp1Q811S7 Gm4011-201ENSMUST00000174657 2555 ntBASIC5.45□□□□□ -1.54
Ubp1Q811S7 Tyr-201ENSMUST00000004770 6042 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
Ubp1Q811S7 Lrrc9-206ENSMUST00000162159 4739 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
Ubp1Q811S7 Trav6-1-201ENSMUST00000103571 338 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
Ubp1Q811S7 Gm15402-201ENSMUST00000114051 670 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
Ubp1Q811S7 Gm13664-201ENSMUST00000117304 345 ntBASIC5.45□□□□□ -1.54
Ubp1Q811S7 Gm11270-201ENSMUST00000117685 471 ntBASIC5.45□□□□□ -1.54
Ubp1Q811S7 Gm16216-201ENSMUST00000118970 1111 ntBASIC5.45□□□□□ -1.54
Ubp1Q811S7 Gm13557-201ENSMUST00000120771 382 ntBASIC5.45□□□□□ -1.54
Ubp1Q811S7 Cdrt4os2-201ENSMUST00000128675 494 ntTSL 2 BASIC5.45□□□□□ -1.54
Ubp1Q811S7 Olfr406-201ENSMUST00000133561 1101 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
Ubp1Q811S7 Gm13775-201ENSMUST00000153865 751 ntTSL 3 BASIC5.45□□□□□ -1.54
Ubp1Q811S7 Gm14216-202ENSMUST00000155334 492 ntTSL 2 BASIC5.45□□□□□ -1.54
Ubp1Q811S7 Gm26278-201ENSMUST00000157098 132 ntBASIC5.45□□□□□ -1.54
Ubp1Q811S7 Gm26102-201ENSMUST00000157251 284 ntBASIC5.45□□□□□ -1.54
Ubp1Q811S7 Gm15647-201ENSMUST00000160178 691 ntTSL 3 BASIC5.45□□□□□ -1.54
Ubp1Q811S7 Gm22122-201ENSMUST00000175147 200 ntBASIC5.45□□□□□ -1.54
Ubp1Q811S7 5730522E02Rik-208ENSMUST00000179180 450 ntAPPRIS ALT2 TSL 5 BASIC5.45□□□□□ -1.54
Ubp1Q811S7 Pafah1b1-ps1-201ENSMUST00000181263 1046 ntBASIC5.45□□□□□ -1.54
Ubp1Q811S7 Gm28075-201ENSMUST00000189179 354 ntTSL 3 BASIC5.45□□□□□ -1.54
Ubp1Q811S7 Gm28717-201ENSMUST00000189950 315 ntBASIC5.45□□□□□ -1.54
Ubp1Q811S7 Gm38040-201ENSMUST00000193505 225 ntBASIC5.45□□□□□ -1.54
Ubp1Q811S7 Gm9480-201ENSMUST00000198038 616 ntBASIC5.45□□□□□ -1.54
Ubp1Q811S7 Gm44391-201ENSMUST00000198490 93 ntBASIC5.45□□□□□ -1.54
Ubp1Q811S7 Gm29926-201ENSMUST00000201443 660 ntTSL 3 BASIC5.45□□□□□ -1.54
Ubp1Q811S7 Gm44074-201ENSMUST00000204562 337 ntBASIC5.45□□□□□ -1.54
Ubp1Q811S7 Gm45119-201ENSMUST00000207612 199 ntBASIC5.45□□□□□ -1.54
Ubp1Q811S7 Olfr927-ps1-201ENSMUST00000216759 782 ntBASIC5.45□□□□□ -1.54
Ubp1Q811S7 AC132474.2-201ENSMUST00000217414 573 ntTSL 5 BASIC5.45□□□□□ -1.54
Ubp1Q811S7 AC138290.2-201ENSMUST00000218822 369 ntBASIC5.45□□□□□ -1.54
Ubp1Q811S7 CT572985.2-201ENSMUST00000220496 211 ntBASIC5.45□□□□□ -1.54
Ubp1Q811S7 AC154616.2-201ENSMUST00000227978 398 ntBASIC5.45□□□□□ -1.54
Ubp1Q811S7 Rps11-ps4-201ENSMUST00000062226 474 ntBASIC5.45□□□□□ -1.54
Ubp1Q811S7 Wfdc15a-201ENSMUST00000063251 488 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
Ubp1Q811S7 Olfr943-201ENSMUST00000071617 1079 ntAPPRIS P2 TSL 3 BASIC5.45□□□□□ -1.54
Ubp1Q811S7 n-R5s215-201ENSMUST00000082480 104 ntBASIC5.45□□□□□ -1.54
Ubp1Q811S7 Gm22807-201ENSMUST00000082737 129 ntBASIC5.45□□□□□ -1.54
Ubp1Q811S7 Gm26055-201ENSMUST00000083038 107 ntBASIC5.45□□□□□ -1.54
Ubp1Q811S7 Mir331-201ENSMUST00000083673 96 ntBASIC5.45□□□□□ -1.54
Ubp1Q811S7 Olfr1348-201ENSMUST00000086319 957 ntTSL 5 BASIC5.45□□□□□ -1.54
Ubp1Q811S7 Gm14391-203ENSMUST00000109056 1956 ntTSL 3 BASIC5.45□□□□□ -1.54
Ubp1Q811S7 Olfr801-204ENSMUST00000216067 4014 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
Ubp1Q811S7 Dnah2-202ENSMUST00000108659 13704 ntAPPRIS P2 TSL 5 BASIC5.45□□□□□ -1.54
Ubp1Q811S7 Gm37174-201ENSMUST00000194699 3058 ntBASIC5.45□□□□□ -1.54
Ubp1Q811S7 Gm38032-201ENSMUST00000195052 1589 ntBASIC5.45□□□□□ -1.54
Ubp1Q811S7 Gvin1-202ENSMUST00000183409 9005 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
Ubp1Q811S7 Gm11743-201ENSMUST00000117385 1735 ntBASIC5.45□□□□□ -1.54
Ubp1Q811S7 Gm14429-201ENSMUST00000121881 2024 ntBASIC5.45□□□□□ -1.54
Ubp1Q811S7 Vmn2r-ps117-201ENSMUST00000176899 2188 ntBASIC5.45□□□□□ -1.54
Ubp1Q811S7 Arhgef6-202ENSMUST00000114735 1614 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
Ubp1Q811S7 AC124569.3-201ENSMUST00000224860 1621 ntBASIC5.45□□□□□ -1.54
Ubp1Q811S7 Sirpb1c-203ENSMUST00000108350 2489 ntAPPRIS ALT2 TSL 1 (best) BASIC5.45□□□□□ -1.54
Ubp1Q811S7 Eya4-201ENSMUST00000074366 3488 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
Ubp1Q811S7 Olfr9-201ENSMUST00000091996 2672 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
Ubp1Q811S7 Gtdc1-203ENSMUST00000112810 2564 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
Ubp1Q811S7 Enpp2-203ENSMUST00000171545 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC5.44□□□□□ -1.54
Ubp1Q811S7 Olfr199-202ENSMUST00000214186 2728 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
Ubp1Q811S7 Rc3h1-201ENSMUST00000035911 3476 ntAPPRIS ALT2 TSL 5 BASIC5.44□□□□□ -1.54
Ubp1Q811S7 Polk-201ENSMUST00000022172 4225 ntAPPRIS P2 TSL 1 (best) BASIC5.44□□□□□ -1.54
Ubp1Q811S7 Gm43361-201ENSMUST00000196562 4690 ntBASIC5.44□□□□□ -1.54
Ubp1Q811S7 Gm12185-202ENSMUST00000094476 5264 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
Ubp1Q811S7 Lpp-203ENSMUST00000115314 14854 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
Ubp1Q811S7 Igkv4-78-201ENSMUST00000103343 358 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
Ubp1Q811S7 Glrb-202ENSMUST00000107743 1101 ntTSL 5 BASIC5.44□□□□□ -1.54
Ubp1Q811S7 Zfp971-202ENSMUST00000108926 1413 ntAPPRIS P1 TSL 3 BASIC5.44□□□□□ -1.54
Ubp1Q811S7 Il12rb2-202ENSMUST00000117441 2600 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
Ubp1Q811S7 Gm11826-201ENSMUST00000118781 438 ntBASIC5.44□□□□□ -1.54
Ubp1Q811S7 Gm13932-201ENSMUST00000120873 610 ntBASIC5.44□□□□□ -1.54
Ubp1Q811S7 Gm7308-201ENSMUST00000121087 447 ntBASIC5.44□□□□□ -1.54
Ubp1Q811S7 Gm6956-201ENSMUST00000134724 546 ntBASIC5.44□□□□□ -1.54
Ubp1Q811S7 Gm14012-201ENSMUST00000136025 677 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
Ubp1Q811S7 Ssxb6-201ENSMUST00000138642 518 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
Ubp1Q811S7 Ptprtos-201ENSMUST00000151688 630 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
Ubp1Q811S7 Gm23669-201ENSMUST00000157470 128 ntBASIC5.44□□□□□ -1.54
Ubp1Q811S7 Gm24395-201ENSMUST00000158139 125 ntBASIC5.44□□□□□ -1.54
Ubp1Q811S7 Gm20484-201ENSMUST00000173738 231 ntTSL 2 BASIC5.44□□□□□ -1.54
Ubp1Q811S7 Gm21797-201ENSMUST00000177579 543 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
Ubp1Q811S7 Prom1-207ENSMUST00000177946 3534 ntAPPRIS ALT2 TSL 5 BASIC5.44□□□□□ -1.54
Retrieved 100 of 76,532 protein–RNA pairs in 100.2 ms