Protein–RNA interactions for Protein: Q80TF3

Pcdh19, Protocadherin-19, mousemouse

Predictions only

Length 1,145 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh19Q80TF3 Dctn4-201ENSMUST00000025505 3738 ntAPPRIS P2 TSL 1 (best) BASIC5.33□□□□□ -1.56
Pcdh19Q80TF3 Trps1-203ENSMUST00000183421 3446 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
Pcdh19Q80TF3 Olfr1279-203ENSMUST00000216697 3385 ntAPPRIS ALT1 TSL 5 BASIC5.33□□□□□ -1.56
Pcdh19Q80TF3 Gm24120-201ENSMUST00000103978 129 ntBASIC5.33□□□□□ -1.56
Pcdh19Q80TF3 Hmgb1-ps4-201ENSMUST00000118281 635 ntBASIC5.33□□□□□ -1.56
Pcdh19Q80TF3 Gm14049-201ENSMUST00000121009 636 ntBASIC5.33□□□□□ -1.56
Pcdh19Q80TF3 Gm11909-201ENSMUST00000121424 759 ntBASIC5.33□□□□□ -1.56
Pcdh19Q80TF3 Gm23837-201ENSMUST00000122656 286 ntBASIC5.33□□□□□ -1.56
Pcdh19Q80TF3 Gm11842-201ENSMUST00000130117 556 ntTSL 5 BASIC5.33□□□□□ -1.56
Pcdh19Q80TF3 Gm12701-201ENSMUST00000134206 659 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
Pcdh19Q80TF3 Gm6956-201ENSMUST00000134724 546 ntBASIC5.33□□□□□ -1.56
Pcdh19Q80TF3 Gm23167-201ENSMUST00000157155 103 ntBASIC5.33□□□□□ -1.56
Pcdh19Q80TF3 Gm25643-201ENSMUST00000158874 103 ntBASIC5.33□□□□□ -1.56
Pcdh19Q80TF3 Gm15810-201ENSMUST00000160241 681 ntTSL 3 BASIC5.33□□□□□ -1.56
Pcdh19Q80TF3 Gm23806-201ENSMUST00000175157 109 ntBASIC5.33□□□□□ -1.56
Pcdh19Q80TF3 Gm20657-201ENSMUST00000177079 515 ntBASIC5.33□□□□□ -1.56
Pcdh19Q80TF3 Gm5849-201ENSMUST00000180151 351 ntAPPRIS P1 TSL 3 BASIC5.33□□□□□ -1.56
Pcdh19Q80TF3 Gm9320-201ENSMUST00000184151 473 ntBASIC5.33□□□□□ -1.56
Pcdh19Q80TF3 Gm27148-201ENSMUST00000185086 160 ntBASIC5.33□□□□□ -1.56
Pcdh19Q80TF3 Gm28781-201ENSMUST00000185760 696 ntBASIC5.33□□□□□ -1.56
Pcdh19Q80TF3 Gm28847-201ENSMUST00000186778 700 ntBASIC5.33□□□□□ -1.56
Pcdh19Q80TF3 Gm29307-201ENSMUST00000187367 696 ntBASIC5.33□□□□□ -1.56
Pcdh19Q80TF3 Gml2-203ENSMUST00000188180 649 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
Pcdh19Q80TF3 Gm29339-201ENSMUST00000189613 696 ntBASIC5.33□□□□□ -1.56
Pcdh19Q80TF3 2610044O15Rik8-206ENSMUST00000191043 504 ntTSL 2 BASIC5.33□□□□□ -1.56
Pcdh19Q80TF3 Gm29407-201ENSMUST00000191468 696 ntBASIC5.33□□□□□ -1.56
Pcdh19Q80TF3 Gm40190-201ENSMUST00000196570 471 ntTSL 2 BASIC5.33□□□□□ -1.56
Pcdh19Q80TF3 Gm18007-201ENSMUST00000205019 844 ntBASIC5.33□□□□□ -1.56
Pcdh19Q80TF3 Olfr747-202ENSMUST00000205373 1132 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
Pcdh19Q80TF3 Gm6112-201ENSMUST00000208037 629 ntBASIC5.33□□□□□ -1.56
Pcdh19Q80TF3 Gm45616-201ENSMUST00000211711 319 ntBASIC5.33□□□□□ -1.56
Pcdh19Q80TF3 AC154552.1-201ENSMUST00000222969 202 ntBASIC5.33□□□□□ -1.56
Pcdh19Q80TF3 AC154627.3-201ENSMUST00000228441 334 ntBASIC5.33□□□□□ -1.56
Pcdh19Q80TF3 Gm23459-201ENSMUST00000083259 131 ntBASIC5.33□□□□□ -1.56
Pcdh19Q80TF3 Mir449a-201ENSMUST00000083641 91 ntBASIC5.33□□□□□ -1.56
Pcdh19Q80TF3 Olfr629-203ENSMUST00000216300 2277 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
Pcdh19Q80TF3 Gm8989-201ENSMUST00000184782 7275 ntBASIC5.33□□□□□ -1.56
Pcdh19Q80TF3 Zfp871-201ENSMUST00000057501 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
Pcdh19Q80TF3 Slc10a2-201ENSMUST00000023835 4152 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
Pcdh19Q80TF3 Gm43887-201ENSMUST00000204727 3186 ntBASIC5.33□□□□□ -1.56
Pcdh19Q80TF3 Vps41-201ENSMUST00000072961 3199 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
Pcdh19Q80TF3 Phf11d-201ENSMUST00000095157 2666 ntAPPRIS P2 TSL 1 (best) BASIC5.33□□□□□ -1.56
Pcdh19Q80TF3 Fap-201ENSMUST00000000402 2187 ntAPPRIS ALT2 TSL 5 BASIC5.33□□□□□ -1.56
Pcdh19Q80TF3 Bclaf1-201ENSMUST00000043881 5437 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
Pcdh19Q80TF3 Gm37456-201ENSMUST00000193176 5837 ntBASIC5.33□□□□□ -1.56
Pcdh19Q80TF3 Ubtfl1-203ENSMUST00000169398 4430 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
Pcdh19Q80TF3 Gm43428-201ENSMUST00000200108 3845 ntBASIC5.33□□□□□ -1.56
Pcdh19Q80TF3 Gm7792-201ENSMUST00000201555 2473 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
Pcdh19Q80TF3 Lcp2-201ENSMUST00000052413 3644 ntAPPRIS P2 TSL 1 (best) BASIC5.33□□□□□ -1.56
Pcdh19Q80TF3 Gm44235-201ENSMUST00000204312 3058 ntBASIC5.32□□□□□ -1.56
Pcdh19Q80TF3 C87414-201ENSMUST00000076321 1847 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
Pcdh19Q80TF3 Olfr1383-202ENSMUST00000204706 4168 ntAPPRIS P1 TSL 3 BASIC5.32□□□□□ -1.56
Pcdh19Q80TF3 Gm10340-201ENSMUST00000170790 1755 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
Pcdh19Q80TF3 Ift80-208ENSMUST00000169064 4064 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
Pcdh19Q80TF3 Gm37880-201ENSMUST00000192216 3257 ntBASIC5.32□□□□□ -1.56
Pcdh19Q80TF3 Nsun6-201ENSMUST00000028034 2897 ntAPPRIS P3 TSL 1 (best) BASIC5.32□□□□□ -1.56
Pcdh19Q80TF3 Olfr448-203ENSMUST00000214529 2764 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
Pcdh19Q80TF3 Vmn1r27-203ENSMUST00000228530 3115 ntAPPRIS P2 BASIC5.32□□□□□ -1.56
Pcdh19Q80TF3 Gm25879-201ENSMUST00000104330 107 ntBASIC5.32□□□□□ -1.56
Pcdh19Q80TF3 Gm11894-201ENSMUST00000121579 328 ntBASIC5.32□□□□□ -1.56
Pcdh19Q80TF3 Tmem216-206ENSMUST00000154383 927 ntAPPRIS P1 TSL 3 BASIC5.32□□□□□ -1.56
Pcdh19Q80TF3 Gm22084-201ENSMUST00000157585 105 ntBASIC5.32□□□□□ -1.56
Pcdh19Q80TF3 Gm17109-201ENSMUST00000163985 358 ntBASIC5.32□□□□□ -1.56
Pcdh19Q80TF3 Il1rl1-205ENSMUST00000174335 1216 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
Pcdh19Q80TF3 Igkv15-101-201ENSMUST00000195917 299 ntBASIC5.32□□□□□ -1.56
Pcdh19Q80TF3 Gm44765-201ENSMUST00000206927 601 ntBASIC5.32□□□□□ -1.56
Pcdh19Q80TF3 Gm18468-201ENSMUST00000207321 369 ntBASIC5.32□□□□□ -1.56
Pcdh19Q80TF3 Gm18470-201ENSMUST00000207467 420 ntBASIC5.32□□□□□ -1.56
Pcdh19Q80TF3 Gm18465-201ENSMUST00000207468 369 ntBASIC5.32□□□□□ -1.56
Pcdh19Q80TF3 Gm18464-201ENSMUST00000207803 420 ntBASIC5.32□□□□□ -1.56
Pcdh19Q80TF3 Gm18458-201ENSMUST00000207908 369 ntBASIC5.32□□□□□ -1.56
Pcdh19Q80TF3 Gm18461-201ENSMUST00000208421 420 ntBASIC5.32□□□□□ -1.56
Pcdh19Q80TF3 Gm7706-202ENSMUST00000211278 590 ntTSL 3 BASIC5.32□□□□□ -1.56
Pcdh19Q80TF3 Olfr1114-ps1-201ENSMUST00000213896 456 ntBASIC5.32□□□□□ -1.56
Pcdh19Q80TF3 Olfr1119-ps1-201ENSMUST00000215282 634 ntBASIC5.32□□□□□ -1.56
Pcdh19Q80TF3 Gm29884-201ENSMUST00000218403 453 ntBASIC5.32□□□□□ -1.56
Pcdh19Q80TF3 Gm18904-201ENSMUST00000218756 329 ntBASIC5.32□□□□□ -1.56
Pcdh19Q80TF3 Gm34081-201ENSMUST00000221332 690 ntTSL 5 BASIC5.32□□□□□ -1.56
Pcdh19Q80TF3 AC159232.1-201ENSMUST00000222297 580 ntTSL 3 BASIC5.32□□□□□ -1.56
Pcdh19Q80TF3 AC100733.1-201ENSMUST00000228494 407 ntBASIC5.32□□□□□ -1.56
Pcdh19Q80TF3 Cox6b2-201ENSMUST00000063324 553 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
Pcdh19Q80TF3 2010005H15Rik-201ENSMUST00000063539 294 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
Pcdh19Q80TF3 Rpl29-ps2-201ENSMUST00000086508 478 ntBASIC5.32□□□□□ -1.56
Pcdh19Q80TF3 Gm11808-201ENSMUST00000089430 504 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
Pcdh19Q80TF3 Olfr47-202ENSMUST00000215569 1603 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
Pcdh19Q80TF3 Lgalsl-201ENSMUST00000047028 3362 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
Pcdh19Q80TF3 2610203C20Rik-206ENSMUST00000181814 2996 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
Pcdh19Q80TF3 Olfr698-202ENSMUST00000214306 4006 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
Pcdh19Q80TF3 Nsd1-201ENSMUST00000099490 12784 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
Pcdh19Q80TF3 Olfr1328-202ENSMUST00000215312 5038 ntAPPRIS ALT1 TSL 5 BASIC5.32□□□□□ -1.56
Pcdh19Q80TF3 Alg11-201ENSMUST00000072572 4960 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
Pcdh19Q80TF3 Gm6729-202ENSMUST00000219485 2209 ntTSL 5 BASIC5.32□□□□□ -1.56
Pcdh19Q80TF3 Vmn2r-ps117-201ENSMUST00000176899 2188 ntBASIC5.32□□□□□ -1.56
Pcdh19Q80TF3 Ceacam2-201ENSMUST00000044547 2844 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
Pcdh19Q80TF3 AC108802.1-201ENSMUST00000219501 3142 ntBASIC5.32□□□□□ -1.56
Pcdh19Q80TF3 Gabra3-201ENSMUST00000055966 3662 ntAPPRIS P2 TSL 1 (best) BASIC5.32□□□□□ -1.56
Pcdh19Q80TF3 Adgb-206ENSMUST00000208717 4902 ntAPPRIS ALT2 TSL 5 BASIC5.31□□□□□ -1.56
Pcdh19Q80TF3 Ccdc66-202ENSMUST00000223689 4262 ntAPPRIS P2 BASIC5.31□□□□□ -1.56
Pcdh19Q80TF3 Cnot1-202ENSMUST00000098473 8390 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
Pcdh19Q80TF3 Meis1-206ENSMUST00000144988 7553 ntTSL 2 BASIC5.31□□□□□ -1.56
Retrieved 100 of 76,532 protein–RNA pairs in 87.7 ms