Protein–RNA interactions for Protein: Q69ZI1

Sh3rf1, E3 ubiquitin-protein ligase SH3RF1, mousemouse

Predictions only

Length 892 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf1Q69ZI1 4933416I08Rik-201ENSMUST00000125315 703 ntBASIC5.32□□□□□ -1.56
Sh3rf1Q69ZI1 Gm14773-201ENSMUST00000125932 451 ntTSL 2 BASIC5.32□□□□□ -1.56
Sh3rf1Q69ZI1 Gm12609-201ENSMUST00000129908 610 ntTSL 2 BASIC5.32□□□□□ -1.56
Sh3rf1Q69ZI1 Gm15327-202ENSMUST00000153958 467 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
Sh3rf1Q69ZI1 Gm15892-203ENSMUST00000156149 1001 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
Sh3rf1Q69ZI1 Gm23258-201ENSMUST00000158319 106 ntBASIC5.32□□□□□ -1.56
Sh3rf1Q69ZI1 Mir3062-201ENSMUST00000174986 105 ntBASIC5.32□□□□□ -1.56
Sh3rf1Q69ZI1 Gm24818-201ENSMUST00000175093 161 ntBASIC5.32□□□□□ -1.56
Sh3rf1Q69ZI1 Mir6343-201ENSMUST00000183584 84 ntBASIC5.32□□□□□ -1.56
Sh3rf1Q69ZI1 1700027A15Rik-201ENSMUST00000185768 321 ntTSL 5 BASIC5.32□□□□□ -1.56
Sh3rf1Q69ZI1 Gm4557-201ENSMUST00000185826 907 ntBASIC5.32□□□□□ -1.56
Sh3rf1Q69ZI1 Gm4526-201ENSMUST00000186039 920 ntBASIC5.32□□□□□ -1.56
Sh3rf1Q69ZI1 Gm8708-201ENSMUST00000188500 906 ntBASIC5.32□□□□□ -1.56
Sh3rf1Q69ZI1 Gm32447-201ENSMUST00000194265 697 ntBASIC5.32□□□□□ -1.56
Sh3rf1Q69ZI1 Gm43710-201ENSMUST00000199583 452 ntBASIC5.32□□□□□ -1.56
Sh3rf1Q69ZI1 Gm44063-201ENSMUST00000203307 376 ntBASIC5.32□□□□□ -1.56
Sh3rf1Q69ZI1 Gm44184-201ENSMUST00000204290 132 ntBASIC5.32□□□□□ -1.56
Sh3rf1Q69ZI1 Gm45365-201ENSMUST00000209489 256 ntBASIC5.32□□□□□ -1.56
Sh3rf1Q69ZI1 Gm7034-201ENSMUST00000218638 645 ntBASIC5.32□□□□□ -1.56
Sh3rf1Q69ZI1 AC153961.2-201ENSMUST00000218877 164 ntBASIC5.32□□□□□ -1.56
Sh3rf1Q69ZI1 Gm5457-201ENSMUST00000022260 333 ntBASIC5.32□□□□□ -1.56
Sh3rf1Q69ZI1 AC160958.1-201ENSMUST00000224833 368 ntBASIC5.32□□□□□ -1.56
Sh3rf1Q69ZI1 AC160980.2-201ENSMUST00000225131 949 ntBASIC5.32□□□□□ -1.56
Sh3rf1Q69ZI1 AL606513.1-201ENSMUST00000225369 579 ntBASIC5.32□□□□□ -1.56
Sh3rf1Q69ZI1 CT956049.1-201ENSMUST00000225671 763 ntBASIC5.32□□□□□ -1.56
Sh3rf1Q69ZI1 AC090496.1-201ENSMUST00000226020 260 ntBASIC5.32□□□□□ -1.56
Sh3rf1Q69ZI1 AC138765.1-201ENSMUST00000228657 385 ntBASIC5.32□□□□□ -1.56
Sh3rf1Q69ZI1 Olfr1176-201ENSMUST00000057439 949 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
Sh3rf1Q69ZI1 Kynu-201ENSMUST00000028223 2733 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
Sh3rf1Q69ZI1 Gm18163-201ENSMUST00000197877 1643 ntBASIC5.32□□□□□ -1.56
Sh3rf1Q69ZI1 5830444F18Rik-201ENSMUST00000194009 1992 ntBASIC5.32□□□□□ -1.56
Sh3rf1Q69ZI1 Il12rb2-202ENSMUST00000117441 2600 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
Sh3rf1Q69ZI1 Zbtb20-204ENSMUST00000114694 26901 ntAPPRIS P3 TSL 5 BASIC5.32□□□□□ -1.56
Sh3rf1Q69ZI1 Gm42537-201ENSMUST00000198260 2574 ntBASIC5.32□□□□□ -1.56
Sh3rf1Q69ZI1 Slc22a30-201ENSMUST00000064507 1888 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
Sh3rf1Q69ZI1 Vmn1r218-203ENSMUST00000227050 10364 ntAPPRIS P2 BASIC5.32□□□□□ -1.56
Sh3rf1Q69ZI1 Rnf2-204ENSMUST00000187048 3201 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
Sh3rf1Q69ZI1 Zfp78-204ENSMUST00000207347 3883 ntAPPRIS P4 TSL 1 (best) BASIC5.32□□□□□ -1.56
Sh3rf1Q69ZI1 Nlrp4a-204ENSMUST00000146907 3479 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
Sh3rf1Q69ZI1 Naalad2-207ENSMUST00000172171 4066 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
Sh3rf1Q69ZI1 Gm11264-201ENSMUST00000143755 2969 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
Sh3rf1Q69ZI1 Olfr716-206ENSMUST00000215284 3515 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
Sh3rf1Q69ZI1 Zscan4a-201ENSMUST00000210573 2279 ntBASIC5.31□□□□□ -1.56
Sh3rf1Q69ZI1 Adgb-206ENSMUST00000208717 4902 ntAPPRIS ALT2 TSL 5 BASIC5.31□□□□□ -1.56
Sh3rf1Q69ZI1 Gm37726-201ENSMUST00000193246 3886 ntBASIC5.31□□□□□ -1.56
Sh3rf1Q69ZI1 Abcb5-201ENSMUST00000035515 3876 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
Sh3rf1Q69ZI1 Olfr644-202ENSMUST00000213184 3572 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
Sh3rf1Q69ZI1 Olfr359-ps1-201ENSMUST00000115977 926 ntBASIC5.31□□□□□ -1.56
Sh3rf1Q69ZI1 Gm6134-201ENSMUST00000117265 171 ntBASIC5.31□□□□□ -1.56
Sh3rf1Q69ZI1 Gm12245-201ENSMUST00000117266 357 ntBASIC5.31□□□□□ -1.56
Sh3rf1Q69ZI1 Gm12872-201ENSMUST00000121835 320 ntBASIC5.31□□□□□ -1.56
Sh3rf1Q69ZI1 Gm13077-201ENSMUST00000121941 484 ntBASIC5.31□□□□□ -1.56
Sh3rf1Q69ZI1 Gm11376-201ENSMUST00000144541 231 ntTSL 5 BASIC5.31□□□□□ -1.56
Sh3rf1Q69ZI1 Gm23538-201ENSMUST00000157535 101 ntBASIC5.31□□□□□ -1.56
Sh3rf1Q69ZI1 Gm24860-201ENSMUST00000158457 276 ntBASIC5.31□□□□□ -1.56
Sh3rf1Q69ZI1 Gm15812-201ENSMUST00000162331 748 ntBASIC5.31□□□□□ -1.56
Sh3rf1Q69ZI1 Gm17062-201ENSMUST00000166987 461 ntBASIC5.31□□□□□ -1.56
Sh3rf1Q69ZI1 Gm21915-201ENSMUST00000177787 402 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
Sh3rf1Q69ZI1 Gm22917-201ENSMUST00000180116 110 ntBASIC5.31□□□□□ -1.56
Sh3rf1Q69ZI1 Gm25412-201ENSMUST00000180258 107 ntBASIC5.31□□□□□ -1.56
Sh3rf1Q69ZI1 Trav6-5-202ENSMUST00000183488 335 ntAPPRIS ALT2 BASIC5.31□□□□□ -1.56
Sh3rf1Q69ZI1 Gm28873-201ENSMUST00000186130 667 ntTSL 2 BASIC5.31□□□□□ -1.56
Sh3rf1Q69ZI1 Vmn2r-ps149-201ENSMUST00000188423 590 ntBASIC5.31□□□□□ -1.56
Sh3rf1Q69ZI1 Pinc-202ENSMUST00000190487 961 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
Sh3rf1Q69ZI1 1700025M24Rik-203ENSMUST00000191524 725 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
Sh3rf1Q69ZI1 C230071H17Rik-201ENSMUST00000196044 2973 ntBASIC5.31□□□□□ -1.56
Sh3rf1Q69ZI1 Gm42672-201ENSMUST00000197821 352 ntBASIC5.31□□□□□ -1.56
Sh3rf1Q69ZI1 Rho-205ENSMUST00000203877 939 ntTSL 2 BASIC5.31□□□□□ -1.56
Sh3rf1Q69ZI1 Gm44475-201ENSMUST00000204041 424 ntBASIC5.31□□□□□ -1.56
Sh3rf1Q69ZI1 Gm18850-201ENSMUST00000211578 388 ntBASIC5.31□□□□□ -1.56
Sh3rf1Q69ZI1 AC132315.1-201ENSMUST00000221771 390 ntBASIC5.31□□□□□ -1.56
Sh3rf1Q69ZI1 AC154573.1-201ENSMUST00000225913 4659 ntBASIC5.31□□□□□ -1.56
Sh3rf1Q69ZI1 AC141884.1-201ENSMUST00000226327 636 ntBASIC5.31□□□□□ -1.56
Sh3rf1Q69ZI1 AC155237.2-201ENSMUST00000228487 478 ntBASIC5.31□□□□□ -1.56
Sh3rf1Q69ZI1 AC154846.2-201ENSMUST00000228805 424 ntBASIC5.31□□□□□ -1.56
Sh3rf1Q69ZI1 AC155167.1-201ENSMUST00000228931 614 ntBASIC5.31□□□□□ -1.56
Sh3rf1Q69ZI1 Mir449a-201ENSMUST00000083641 91 ntBASIC5.31□□□□□ -1.56
Sh3rf1Q69ZI1 Gm6043-201ENSMUST00000099961 492 ntBASIC5.31□□□□□ -1.56
Sh3rf1Q69ZI1 Olfr479-203ENSMUST00000214599 3248 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
Sh3rf1Q69ZI1 Zfp119b-202ENSMUST00000189452 2078 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
Sh3rf1Q69ZI1 Vmn1r171-211ENSMUST00000228559 2637 ntAPPRIS ALT2 BASIC5.31□□□□□ -1.56
Sh3rf1Q69ZI1 Mmp1a-202ENSMUST00000217651 2011 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
Sh3rf1Q69ZI1 Pramel4-201ENSMUST00000084191 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
Sh3rf1Q69ZI1 Gm44679-201ENSMUST00000207202 2908 ntBASIC5.3□□□□□ -1.56
Sh3rf1Q69ZI1 Zfp182-202ENSMUST00000115333 3130 ntAPPRIS P2 TSL 1 (best) BASIC5.3□□□□□ -1.56
Sh3rf1Q69ZI1 Lgalsl-201ENSMUST00000047028 3362 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Sh3rf1Q69ZI1 Zfp120-201ENSMUST00000089207 4127 ntAPPRIS P2 TSL 1 (best) BASIC5.3□□□□□ -1.56
Sh3rf1Q69ZI1 Nlrp9b-201ENSMUST00000073151 3346 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Sh3rf1Q69ZI1 Chl1-203ENSMUST00000203830 4152 ntAPPRIS P2 TSL 1 (best) BASIC5.3□□□□□ -1.56
Sh3rf1Q69ZI1 Olfr1406-202ENSMUST00000201132 2952 ntAPPRIS P1 TSL 3 BASIC5.3□□□□□ -1.56
Sh3rf1Q69ZI1 Gm25595-201ENSMUST00000102273 97 ntBASIC5.3□□□□□ -1.56
Sh3rf1Q69ZI1 Igkv4-92-201ENSMUST00000103332 351 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
Sh3rf1Q69ZI1 Gm22273-201ENSMUST00000104040 132 ntBASIC5.3□□□□□ -1.56
Sh3rf1Q69ZI1 Gm12805-201ENSMUST00000117305 1048 ntBASIC5.3□□□□□ -1.56
Sh3rf1Q69ZI1 Gm15211-201ENSMUST00000118932 528 ntBASIC5.3□□□□□ -1.56
Sh3rf1Q69ZI1 Gm15981-201ENSMUST00000119196 457 ntBASIC5.3□□□□□ -1.56
Sh3rf1Q69ZI1 Gm12815-201ENSMUST00000121737 135 ntBASIC5.3□□□□□ -1.56
Sh3rf1Q69ZI1 Prdx6-ps2-201ENSMUST00000121989 694 ntBASIC5.3□□□□□ -1.56
Sh3rf1Q69ZI1 A630023P12Rik-204ENSMUST00000142879 524 ntTSL 3 BASIC5.3□□□□□ -1.56
Sh3rf1Q69ZI1 Gm15669-201ENSMUST00000147834 526 ntTSL 3 BASIC5.3□□□□□ -1.56
Retrieved 100 of 76,532 protein–RNA pairs in 75.5 ms