Protein–RNA interactions for Protein: Q63870

Col7a1, Collagen alpha-1(VII) chain, mousemouse

Predictions only

Length 2,944 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col7a1Q63870 Gm19498-201ENSMUST00000191128 331 ntBASIC2.53□□□□□ -2
Col7a1Q63870 Gm8319-201ENSMUST00000205708 641 ntBASIC2.53□□□□□ -2
Col7a1Q63870 Eif1-ps2-201ENSMUST00000221990 339 ntBASIC2.53□□□□□ -2
Col7a1Q63870 Olfr583-201ENSMUST00000098211 960 ntAPPRIS P1 BASIC2.53□□□□□ -2
Col7a1Q63870 Dock11-202ENSMUST00000115264 1725 ntTSL 5 BASIC2.53□□□□□ -2
Col7a1Q63870 Vmn1r184-202ENSMUST00000227230 7999 ntAPPRIS P1 BASIC2.53□□□□□ -2
Col7a1Q63870 Gm36944-201ENSMUST00000192257 2759 ntBASIC2.53□□□□□ -2
Col7a1Q63870 C730045M19Rik-201ENSMUST00000201944 1315 ntBASIC2.53□□□□□ -2
Col7a1Q63870 Robo2-203ENSMUST00000117785 8124 ntTSL 1 (best) BASIC2.53□□□□□ -2
Col7a1Q63870 Gm9218-201ENSMUST00000121068 2694 ntBASIC2.53□□□□□ -2
Col7a1Q63870 Gm12723-201ENSMUST00000120700 451 ntBASIC2.53□□□□□ -2
Col7a1Q63870 Gm13511-201ENSMUST00000121167 363 ntBASIC2.53□□□□□ -2
Col7a1Q63870 n-R5s32-201ENSMUST00000122495 103 ntBASIC2.53□□□□□ -2
Col7a1Q63870 1700010J16Rik-202ENSMUST00000189116 890 ntTSL 1 (best) BASIC2.53□□□□□ -2
Col7a1Q63870 AC160958.1-201ENSMUST00000224833 368 ntBASIC2.53□□□□□ -2
Col7a1Q63870 AC134335.1-201ENSMUST00000227626 329 ntBASIC2.53□□□□□ -2
Col7a1Q63870 Olfr1477-201ENSMUST00000214274 3913 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
Col7a1Q63870 Gm38083-201ENSMUST00000194758 3498 ntBASIC2.53□□□□□ -2
Col7a1Q63870 Olfr1211-203ENSMUST00000213412 4173 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2.01
Col7a1Q63870 Gm37504-201ENSMUST00000192537 2374 ntBASIC2.52□□□□□ -2.01
Col7a1Q63870 Vmn1r185-202ENSMUST00000226694 5656 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
Col7a1Q63870 Vmn1r185-208ENSMUST00000228004 5682 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
Col7a1Q63870 Gm6634-201ENSMUST00000180497 1804 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
Col7a1Q63870 Neb-201ENSMUST00000028320 10298 ntTSL 5 BASIC2.52□□□□□ -2.01
Col7a1Q63870 Mir542-201ENSMUST00000102186 85 ntBASIC2.52□□□□□ -2.01
Col7a1Q63870 Gm13728-201ENSMUST00000117471 400 ntBASIC2.52□□□□□ -2.01
Col7a1Q63870 Gm17030-201ENSMUST00000167016 393 ntBASIC2.52□□□□□ -2.01
Col7a1Q63870 Gm28466-201ENSMUST00000190678 659 ntBASIC2.52□□□□□ -2.01
Col7a1Q63870 Gm43427-201ENSMUST00000198188 331 ntBASIC2.52□□□□□ -2.01
Col7a1Q63870 Gm42428-201ENSMUST00000198677 302 ntBASIC2.52□□□□□ -2.01
Col7a1Q63870 Gm45246-201ENSMUST00000210820 367 ntBASIC2.52□□□□□ -2.01
Col7a1Q63870 Gm45452-201ENSMUST00000210905 177 ntBASIC2.52□□□□□ -2.01
Col7a1Q63870 AC154295.1-201ENSMUST00000217210 621 ntTSL 3 BASIC2.52□□□□□ -2.01
Col7a1Q63870 Gm7422-201ENSMUST00000220115 640 ntBASIC2.52□□□□□ -2.01
Col7a1Q63870 AC211878.5-201ENSMUST00000221697 409 ntBASIC2.52□□□□□ -2.01
Col7a1Q63870 AC134864.1-201ENSMUST00000226326 511 ntBASIC2.52□□□□□ -2.01
Col7a1Q63870 Gm10025-201ENSMUST00000079568 372 ntBASIC2.52□□□□□ -2.01
Col7a1Q63870 Akap4-201ENSMUST00000057101 2851 ntAPPRIS P4 TSL 1 (best) BASIC2.52□□□□□ -2.01
Col7a1Q63870 Gm2987-201ENSMUST00000187673 1693 ntBASIC2.52□□□□□ -2.01
Col7a1Q63870 Zfp106-211ENSMUST00000171215 6391 ntTSL 5 BASIC2.52□□□□□ -2.01
Col7a1Q63870 Olfr784-202ENSMUST00000214064 3119 ntAPPRIS P1 TSL 5 BASIC2.52□□□□□ -2.01
Col7a1Q63870 Gm24898-201ENSMUST00000158133 106 ntBASIC2.52□□□□□ -2.01
Col7a1Q63870 Mir7039-201ENSMUST00000183852 85 ntBASIC2.52□□□□□ -2.01
Col7a1Q63870 Gm43685-201ENSMUST00000198876 706 ntTSL 3 BASIC2.52□□□□□ -2.01
Col7a1Q63870 Olfr439-ps1-201ENSMUST00000204679 307 ntBASIC2.52□□□□□ -2.01
Col7a1Q63870 AC111044.1-201ENSMUST00000220206 555 ntTSL 5 BASIC2.52□□□□□ -2.01
Col7a1Q63870 Vps13d-201ENSMUST00000020441 15665 ntAPPRIS ALT2 TSL 5 BASIC2.52□□□□□ -2.01
Col7a1Q63870 Gm43845-201ENSMUST00000202462 1820 ntBASIC2.52□□□□□ -2.01
Col7a1Q63870 Vmn1r235-201ENSMUST00000060603 1781 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
Col7a1Q63870 Olfr1168-202ENSMUST00000215996 2322 ntAPPRIS P1 TSL 3 BASIC2.52□□□□□ -2.01
Col7a1Q63870 Gm13974-201ENSMUST00000144368 1454 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
Col7a1Q63870 Olfr807-202ENSMUST00000213379 1866 ntAPPRIS P1 TSL 5 BASIC2.52□□□□□ -2.01
Col7a1Q63870 Olfr965-202ENSMUST00000213335 1700 ntAPPRIS P1 TSL 5 BASIC2.52□□□□□ -2.01
Col7a1Q63870 Srek1-204ENSMUST00000210489 6330 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
Col7a1Q63870 Dnah6-201ENSMUST00000064948 12652 ntAPPRIS P2 TSL 5 BASIC2.52□□□□□ -2.01
Col7a1Q63870 Olfr235-203ENSMUST00000214551 2240 ntAPPRIS P1 TSL 5 BASIC2.52□□□□□ -2.01
Col7a1Q63870 Gm7327-201ENSMUST00000120925 652 ntBASIC2.52□□□□□ -2.01
Col7a1Q63870 Gm5396-201ENSMUST00000121222 532 ntBASIC2.52□□□□□ -2.01
Col7a1Q63870 Mir5123-201ENSMUST00000177794 83 ntBASIC2.52□□□□□ -2.01
Col7a1Q63870 Gm18672-201ENSMUST00000208035 270 ntBASIC2.52□□□□□ -2.01
Col7a1Q63870 Olfr992-201ENSMUST00000099927 930 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
Col7a1Q63870 Fnd3c2-201ENSMUST00000091282 3662 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
Col7a1Q63870 Ankar-201ENSMUST00000053499 4571 ntAPPRIS P3 TSL 1 (best) BASIC2.51□□□□□ -2.01
Col7a1Q63870 Mga-203ENSMUST00000110773 13577 ntAPPRIS ALT2 TSL 5 BASIC2.51□□□□□ -2.01
Col7a1Q63870 Olfr1489-202ENSMUST00000217182 11140 ntAPPRIS P1 TSL 5 BASIC2.51□□□□□ -2.01
Col7a1Q63870 Vmn1r185-207ENSMUST00000227695 5292 ntAPPRIS P1 BASIC2.51□□□□□ -2.01
Col7a1Q63870 Gm37928-201ENSMUST00000193265 4131 ntBASIC2.51□□□□□ -2.01
Col7a1Q63870 Vmn1r71-205ENSMUST00000227940 4725 ntAPPRIS P2 BASIC2.51□□□□□ -2.01
Col7a1Q63870 Ube2v2-204ENSMUST00000118236 893 ntTSL 5 BASIC2.51□□□□□ -2.01
Col7a1Q63870 Gm15536-201ENSMUST00000121411 114 ntBASIC2.51□□□□□ -2.01
Col7a1Q63870 Gm12858-201ENSMUST00000121913 208 ntBASIC2.51□□□□□ -2.01
Col7a1Q63870 Ppp1r2-ps7-201ENSMUST00000140102 609 ntBASIC2.51□□□□□ -2.01
Col7a1Q63870 Gm25967-201ENSMUST00000157168 147 ntBASIC2.51□□□□□ -2.01
Col7a1Q63870 Trbv10-201ENSMUST00000168322 289 ntBASIC2.51□□□□□ -2.01
Col7a1Q63870 Gm38076-201ENSMUST00000193889 450 ntBASIC2.51□□□□□ -2.01
Col7a1Q63870 Gm43512-201ENSMUST00000198495 176 ntBASIC2.51□□□□□ -2.01
Col7a1Q63870 Igkv1-115-201ENSMUST00000198714 302 ntBASIC2.51□□□□□ -2.01
Col7a1Q63870 Gm39033-201ENSMUST00000209158 1021 ntTSL 5 BASIC2.51□□□□□ -2.01
Col7a1Q63870 Gm7753-201ENSMUST00000221007 867 ntBASIC2.51□□□□□ -2.01
Col7a1Q63870 Vmn2r37-201ENSMUST00000072787 3081 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
Col7a1Q63870 Olfr1171-ps1-202ENSMUST00000150178 1398 ntTSL 3 BASIC2.51□□□□□ -2.01
Col7a1Q63870 5730507A11Rik-201ENSMUST00000204297 3371 ntBASIC2.51□□□□□ -2.01
Col7a1Q63870 Zfp709-201ENSMUST00000034259 2181 ntTSL 5 BASIC2.51□□□□□ -2.01
Col7a1Q63870 Gm42785-201ENSMUST00000202316 3835 ntBASIC2.51□□□□□ -2.01
Col7a1Q63870 Olfr1251-201ENSMUST00000214304 3133 ntAPPRIS P1 TSL 5 BASIC2.51□□□□□ -2.01
Col7a1Q63870 Vps13d-202ENSMUST00000036579 15849 ntAPPRIS P2 TSL 5 BASIC2.51□□□□□ -2.01
Col7a1Q63870 Gm29674-202ENSMUST00000219664 4083 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
Col7a1Q63870 Igkv5-39-201ENSMUST00000103370 287 ntAPPRIS P1 BASIC2.51□□□□□ -2.01
Col7a1Q63870 Gm25068-201ENSMUST00000103895 110 ntBASIC2.51□□□□□ -2.01
Col7a1Q63870 Gm26396-201ENSMUST00000104093 132 ntBASIC2.51□□□□□ -2.01
Col7a1Q63870 n-R5s201-201ENSMUST00000122622 116 ntBASIC2.51□□□□□ -2.01
Col7a1Q63870 4933403O08Rik-201ENSMUST00000132037 999 ntAPPRIS ALT2 TSL 1 (best) BASIC2.51□□□□□ -2.01
Col7a1Q63870 A630050E04Rik-201ENSMUST00000151443 581 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
Col7a1Q63870 Gm16236-201ENSMUST00000159588 379 ntBASIC2.51□□□□□ -2.01
Col7a1Q63870 Vmn2r-ps35-201ENSMUST00000169206 831 ntBASIC2.51□□□□□ -2.01
Col7a1Q63870 Gm42530-201ENSMUST00000202683 550 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
Col7a1Q63870 Gm34838-201ENSMUST00000209231 958 ntTSL 5 BASIC2.51□□□□□ -2.01
Col7a1Q63870 Gm45474-201ENSMUST00000209471 408 ntBASIC2.51□□□□□ -2.01
Col7a1Q63870 Gm19181-201ENSMUST00000218891 940 ntBASIC2.51□□□□□ -2.01
Col7a1Q63870 Gm5374-201ENSMUST00000222868 657 ntBASIC2.51□□□□□ -2.01
Retrieved 100 of 76,532 protein–RNA pairs in 81.8 ms