Protein–RNA interactions for Protein: Q5R1C3

Trav3-3, T cell receptor alpha variable 3-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-3Q5R1C3 Gm2314-201ENSMUST00000200391 586 ntBASIC2.77□□□□□ -1.97
Trav3-3Q5R1C3 Gm42453-201ENSMUST00000200477 409 ntBASIC2.77□□□□□ -1.97
Trav3-3Q5R1C3 Gm44088-201ENSMUST00000204595 237 ntBASIC2.77□□□□□ -1.97
Trav3-3Q5R1C3 Gm33626-201ENSMUST00000206790 828 ntBASIC2.77□□□□□ -1.97
Trav3-3Q5R1C3 Gm20586-201ENSMUST00000210122 547 ntBASIC2.77□□□□□ -1.97
Trav3-3Q5R1C3 Gm45380-201ENSMUST00000210465 315 ntBASIC2.77□□□□□ -1.97
Trav3-3Q5R1C3 1700011B04Rik-211ENSMUST00000222690 394 ntTSL 5 BASIC2.77□□□□□ -1.97
Trav3-3Q5R1C3 AC118006.2-201ENSMUST00000224167 962 ntBASIC2.77□□□□□ -1.97
Trav3-3Q5R1C3 AC166574.3-201ENSMUST00000226725 367 ntBASIC2.77□□□□□ -1.97
Trav3-3Q5R1C3 4930568D16Rik-201ENSMUST00000028243 1227 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
Trav3-3Q5R1C3 Olfr1442-201ENSMUST00000057924 1065 ntAPPRIS P1 BASIC2.77□□□□□ -1.97
Trav3-3Q5R1C3 Olfr776-201ENSMUST00000073704 939 ntAPPRIS P1 BASIC2.77□□□□□ -1.97
Trav3-3Q5R1C3 Gm25699-201ENSMUST00000082896 167 ntBASIC2.77□□□□□ -1.97
Trav3-3Q5R1C3 Ssxb3-202ENSMUST00000089379 604 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
Trav3-3Q5R1C3 Gm10553-201ENSMUST00000097669 372 ntAPPRIS P1 BASIC2.77□□□□□ -1.97
Trav3-3Q5R1C3 Vmn1r55-201ENSMUST00000098844 1284 ntAPPRIS P1 BASIC2.77□□□□□ -1.97
Trav3-3Q5R1C3 Gm44842-201ENSMUST00000209173 3372 ntBASIC2.77□□□□□ -1.97
Trav3-3Q5R1C3 Gm20557-201ENSMUST00000192871 2794 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
Trav3-3Q5R1C3 Gm42448-201ENSMUST00000197122 2644 ntBASIC2.76□□□□□ -1.97
Trav3-3Q5R1C3 A630033H20Rik-201ENSMUST00000067249 3004 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
Trav3-3Q5R1C3 Ghr-208ENSMUST00000161561 2749 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
Trav3-3Q5R1C3 Mup6-201ENSMUST00000107517 926 ntAPPRIS P1 TSL 5 BASIC2.76□□□□□ -1.97
Trav3-3Q5R1C3 Rps15a-ps4-201ENSMUST00000119415 392 ntBASIC2.76□□□□□ -1.97
Trav3-3Q5R1C3 Vmn1r-ps3-201ENSMUST00000122439 917 ntBASIC2.76□□□□□ -1.97
Trav3-3Q5R1C3 Gm12150-201ENSMUST00000130874 468 ntTSL 3 BASIC2.76□□□□□ -1.97
Trav3-3Q5R1C3 Gm25341-201ENSMUST00000157461 268 ntBASIC2.76□□□□□ -1.97
Trav3-3Q5R1C3 Gm24773-201ENSMUST00000158513 99 ntBASIC2.76□□□□□ -1.97
Trav3-3Q5R1C3 Gm16101-201ENSMUST00000160695 430 ntBASIC2.76□□□□□ -1.97
Trav3-3Q5R1C3 Vmn1r113-201ENSMUST00000168794 894 ntTSL 5 BASIC2.76□□□□□ -1.97
Trav3-3Q5R1C3 Vmn1r-ps8-201ENSMUST00000177200 838 ntBASIC2.76□□□□□ -1.97
Trav3-3Q5R1C3 Spin2f-201ENSMUST00000177990 765 ntAPPRIS P1 TSL 5 BASIC2.76□□□□□ -1.97
Trav3-3Q5R1C3 Gm4761-201ENSMUST00000178086 582 ntBASIC2.76□□□□□ -1.97
Trav3-3Q5R1C3 Mir7056-201ENSMUST00000183776 59 ntBASIC2.76□□□□□ -1.97
Trav3-3Q5R1C3 Gm27414-201ENSMUST00000185033 381 ntBASIC2.76□□□□□ -1.97
Trav3-3Q5R1C3 Hmgb1-rs16-201ENSMUST00000185927 613 ntBASIC2.76□□□□□ -1.97
Trav3-3Q5R1C3 Mrgprb12-ps-201ENSMUST00000186150 949 ntBASIC2.76□□□□□ -1.97
Trav3-3Q5R1C3 Gm28932-201ENSMUST00000186300 357 ntTSL 5 BASIC2.76□□□□□ -1.97
Trav3-3Q5R1C3 Gm37670-201ENSMUST00000193622 229 ntBASIC2.76□□□□□ -1.97
Trav3-3Q5R1C3 Gm17935-201ENSMUST00000196649 772 ntBASIC2.76□□□□□ -1.97
Trav3-3Q5R1C3 Gm43198-201ENSMUST00000200927 326 ntBASIC2.76□□□□□ -1.97
Trav3-3Q5R1C3 4930598N05Rik-205ENSMUST00000208693 873 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
Trav3-3Q5R1C3 Olfr879-ps1-201ENSMUST00000212455 694 ntBASIC2.76□□□□□ -1.97
Trav3-3Q5R1C3 Gm46194-201ENSMUST00000218136 320 ntBASIC2.76□□□□□ -1.97
Trav3-3Q5R1C3 AC140381.1-201ENSMUST00000219168 367 ntTSL 2 BASIC2.76□□□□□ -1.97
Trav3-3Q5R1C3 AC109172.2-201ENSMUST00000228792 381 ntBASIC2.76□□□□□ -1.97
Trav3-3Q5R1C3 Olfr970-201ENSMUST00000071132 936 ntAPPRIS P1 BASIC2.76□□□□□ -1.97
Trav3-3Q5R1C3 Olfr972-201ENSMUST00000079767 945 ntAPPRIS P1 BASIC2.76□□□□□ -1.97
Trav3-3Q5R1C3 Olfr1256-201ENSMUST00000099763 921 ntAPPRIS P1 BASIC2.76□□□□□ -1.97
Trav3-3Q5R1C3 Olfr1258-201ENSMUST00000102609 7007 ntAPPRIS P1 TSL 3 BASIC2.76□□□□□ -1.97
Trav3-3Q5R1C3 Olfr194-202ENSMUST00000213228 3668 ntAPPRIS P1 TSL 5 BASIC2.76□□□□□ -1.97
Trav3-3Q5R1C3 AC154462.1-201ENSMUST00000228897 2260 ntBASIC2.76□□□□□ -1.97
Trav3-3Q5R1C3 Gm43404-201ENSMUST00000200424 2534 ntBASIC2.76□□□□□ -1.97
Trav3-3Q5R1C3 Olfr1270-204ENSMUST00000215975 4854 ntAPPRIS P1 TSL 5 BASIC2.76□□□□□ -1.97
Trav3-3Q5R1C3 Ktn1-226ENSMUST00000191511 3962 ntAPPRIS ALT2 TSL 5 BASIC2.76□□□□□ -1.97
Trav3-3Q5R1C3 Gm38278-201ENSMUST00000194715 1365 ntBASIC2.75□□□□□ -1.97
Trav3-3Q5R1C3 Gm43178-201ENSMUST00000197257 1386 ntBASIC2.75□□□□□ -1.97
Trav3-3Q5R1C3 Mageb5-201ENSMUST00000082048 1357 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
Trav3-3Q5R1C3 Gm20756-201ENSMUST00000201080 1595 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
Trav3-3Q5R1C3 Gm15319-201ENSMUST00000084046 2522 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
Trav3-3Q5R1C3 Gm23431-201ENSMUST00000104006 107 ntBASIC2.75□□□□□ -1.97
Trav3-3Q5R1C3 Mir291a-201ENSMUST00000104815 82 ntBASIC2.75□□□□□ -1.97
Trav3-3Q5R1C3 Gm15399-201ENSMUST00000118055 724 ntBASIC2.75□□□□□ -1.97
Trav3-3Q5R1C3 Gm14008-201ENSMUST00000120483 274 ntBASIC2.75□□□□□ -1.97
Trav3-3Q5R1C3 Rpl12-ps2-201ENSMUST00000121298 321 ntBASIC2.75□□□□□ -1.97
Trav3-3Q5R1C3 Gm13007-201ENSMUST00000121866 365 ntBASIC2.75□□□□□ -1.97
Trav3-3Q5R1C3 A930041C12Rik-201ENSMUST00000149156 537 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
Trav3-3Q5R1C3 Gm22561-201ENSMUST00000157331 84 ntBASIC2.75□□□□□ -1.97
Trav3-3Q5R1C3 Gm26085-201ENSMUST00000157900 116 ntBASIC2.75□□□□□ -1.97
Trav3-3Q5R1C3 Gm23257-201ENSMUST00000158322 132 ntBASIC2.75□□□□□ -1.97
Trav3-3Q5R1C3 Gm22392-201ENSMUST00000177971 107 ntBASIC2.75□□□□□ -1.97
Trav3-3Q5R1C3 Rpl31-ps24-201ENSMUST00000181350 379 ntBASIC2.75□□□□□ -1.97
Trav3-3Q5R1C3 Gm21294-201ENSMUST00000186443 934 ntAPPRIS P1 TSL 5 BASIC2.75□□□□□ -1.97
Trav3-3Q5R1C3 Gm20888-202ENSMUST00000186890 919 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
Trav3-3Q5R1C3 Gm21497-201ENSMUST00000189455 919 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
Trav3-3Q5R1C3 Gm20811-201ENSMUST00000190500 553 ntBASIC2.75□□□□□ -1.97
Trav3-3Q5R1C3 Gm38250-201ENSMUST00000192691 766 ntTSL 3 BASIC2.75□□□□□ -1.97
Trav3-3Q5R1C3 Gm37898-201ENSMUST00000193781 174 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
Trav3-3Q5R1C3 Rpl26-ps3-201ENSMUST00000195115 435 ntBASIC2.75□□□□□ -1.97
Trav3-3Q5R1C3 Gm19080-201ENSMUST00000196082 550 ntBASIC2.75□□□□□ -1.97
Trav3-3Q5R1C3 Gm43649-201ENSMUST00000196596 391 ntBASIC2.75□□□□□ -1.97
Trav3-3Q5R1C3 Igkv13-80-1-201ENSMUST00000197926 255 ntBASIC2.75□□□□□ -1.97
Trav3-3Q5R1C3 Hcfc1r1-ps2-201ENSMUST00000199379 339 ntBASIC2.75□□□□□ -1.97
Trav3-3Q5R1C3 Gm6051-201ENSMUST00000201529 352 ntBASIC2.75□□□□□ -1.97
Trav3-3Q5R1C3 Gm44404-201ENSMUST00000203979 636 ntBASIC2.75□□□□□ -1.97
Trav3-3Q5R1C3 Gm43897-201ENSMUST00000204019 309 ntBASIC2.75□□□□□ -1.97
Trav3-3Q5R1C3 Gm34224-201ENSMUST00000204606 364 ntBASIC2.75□□□□□ -1.97
Trav3-3Q5R1C3 Gm35876-201ENSMUST00000205044 459 ntBASIC2.75□□□□□ -1.97
Trav3-3Q5R1C3 Spcs2-205ENSMUST00000207580 868 ntTSL 5 BASIC2.75□□□□□ -1.97
Trav3-3Q5R1C3 Gm10988-201ENSMUST00000209150 1088 ntBASIC2.75□□□□□ -1.97
Trav3-3Q5R1C3 AC160123.1-201ENSMUST00000213443 570 ntTSL 5 BASIC2.75□□□□□ -1.97
Trav3-3Q5R1C3 Gm17829-201ENSMUST00000219782 344 ntBASIC2.75□□□□□ -1.97
Trav3-3Q5R1C3 Gm18120-201ENSMUST00000220079 511 ntBASIC2.75□□□□□ -1.97
Trav3-3Q5R1C3 Selenok-ps6-201ENSMUST00000221812 283 ntBASIC2.75□□□□□ -1.97
Trav3-3Q5R1C3 CT010506.3-201ENSMUST00000223699 410 ntBASIC2.75□□□□□ -1.97
Trav3-3Q5R1C3 Vmn1r36-202ENSMUST00000226635 918 ntAPPRIS P2 BASIC2.75□□□□□ -1.97
Trav3-3Q5R1C3 Defb8-201ENSMUST00000033854 287 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
Trav3-3Q5R1C3 Art2b-201ENSMUST00000063920 870 ntAPPRIS P2 TSL 1 (best) BASIC2.75□□□□□ -1.97
Trav3-3Q5R1C3 Olfr1201-201ENSMUST00000073458 924 ntAPPRIS P1 BASIC2.75□□□□□ -1.97
Trav3-3Q5R1C3 Vmn1r6-201ENSMUST00000079669 1058 ntAPPRIS P2 BASIC2.75□□□□□ -1.97
Trav3-3Q5R1C3 Gm23518-201ENSMUST00000082835 153 ntBASIC2.75□□□□□ -1.97
Retrieved 100 of 76,532 protein–RNA pairs in 85.3 ms