Protein–RNA interactions for Protein: Q3UHA3

Spg11, Spatacsin, mousemouse

Predictions only

Length 2,430 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Spg11Q3UHA3 Sycp2-201ENSMUST00000081134 5717 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
Spg11Q3UHA3 Traj44-201ENSMUST00000103698 61 ntAPPRIS P1 BASIC2.97□□□□□ -1.93
Spg11Q3UHA3 Gm23803-201ENSMUST00000104610 132 ntBASIC2.97□□□□□ -1.93
Spg11Q3UHA3 Gm22947-201ENSMUST00000158559 91 ntBASIC2.97□□□□□ -1.93
Spg11Q3UHA3 Gm16134-201ENSMUST00000161714 336 ntBASIC2.97□□□□□ -1.93
Spg11Q3UHA3 Gm34314-201ENSMUST00000203622 367 ntBASIC2.97□□□□□ -1.93
Spg11Q3UHA3 AC153361.2-203ENSMUST00000218083 661 ntTSL 3 BASIC2.97□□□□□ -1.93
Spg11Q3UHA3 AC164116.2-201ENSMUST00000225398 1038 ntBASIC2.97□□□□□ -1.93
Spg11Q3UHA3 Gm43606-201ENSMUST00000195938 3556 ntBASIC2.97□□□□□ -1.93
Spg11Q3UHA3 Gm38240-201ENSMUST00000195110 2487 ntBASIC2.97□□□□□ -1.93
Spg11Q3UHA3 Matr3-ps2-201ENSMUST00000160839 1996 ntBASIC2.97□□□□□ -1.93
Spg11Q3UHA3 Gm24048-201ENSMUST00000102411 106 ntBASIC2.97□□□□□ -1.93
Spg11Q3UHA3 Traj24-201ENSMUST00000103717 63 ntAPPRIS P1 BASIC2.97□□□□□ -1.93
Spg11Q3UHA3 Gm26396-201ENSMUST00000104093 132 ntBASIC2.97□□□□□ -1.93
Spg11Q3UHA3 Gm15403-201ENSMUST00000119343 1227 ntBASIC2.97□□□□□ -1.93
Spg11Q3UHA3 Mir6386-201ENSMUST00000183558 104 ntBASIC2.97□□□□□ -1.93
Spg11Q3UHA3 Hmgb1-rs16-201ENSMUST00000185927 613 ntBASIC2.97□□□□□ -1.93
Spg11Q3UHA3 Trdn-202ENSMUST00000217779 1182 ntAPPRIS ALT2 TSL 1 (best) BASIC2.97□□□□□ -1.93
Spg11Q3UHA3 AC134537.3-201ENSMUST00000220154 503 ntTSL 3 BASIC2.97□□□□□ -1.93
Spg11Q3UHA3 Mup5-201ENSMUST00000082287 925 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
Spg11Q3UHA3 Gm38699-201ENSMUST00000221301 1740 ntBASIC2.97□□□□□ -1.93
Spg11Q3UHA3 E430014B02Rik-201ENSMUST00000194215 3156 ntBASIC2.96□□□□□ -1.93
Spg11Q3UHA3 Csn1s1-201ENSMUST00000094641 1411 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.93
Spg11Q3UHA3 Gm38090-201ENSMUST00000195733 1942 ntBASIC2.96□□□□□ -1.94
Spg11Q3UHA3 Vmn2r70-201ENSMUST00000168230 2565 ntAPPRIS P1 TSL 5 BASIC2.96□□□□□ -1.94
Spg11Q3UHA3 Olfr178-202ENSMUST00000206523 2095 ntAPPRIS P1 TSL 3 BASIC2.96□□□□□ -1.94
Spg11Q3UHA3 Olfr816-202ENSMUST00000213438 3306 ntAPPRIS P1 TSL 5 BASIC2.96□□□□□ -1.94
Spg11Q3UHA3 Gm42534-201ENSMUST00000196063 1754 ntBASIC2.96□□□□□ -1.94
Spg11Q3UHA3 Gm28959-201ENSMUST00000186713 551 ntTSL 5 BASIC2.96□□□□□ -1.94
Spg11Q3UHA3 Gm36371-201ENSMUST00000209043 1103 ntBASIC2.96□□□□□ -1.94
Spg11Q3UHA3 C230072F16Rik-203ENSMUST00000220322 1136 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
Spg11Q3UHA3 AC080021.1-201ENSMUST00000228104 700 ntBASIC2.96□□□□□ -1.94
Spg11Q3UHA3 AC117588.3-201ENSMUST00000228517 325 ntBASIC2.96□□□□□ -1.94
Spg11Q3UHA3 Slc5a12-201ENSMUST00000045972 3529 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
Spg11Q3UHA3 Zfp970-202ENSMUST00000108952 1569 ntAPPRIS P1 TSL 2 BASIC2.96□□□□□ -1.94
Spg11Q3UHA3 Pik3ca-201ENSMUST00000029201 8917 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
Spg11Q3UHA3 Rps15a-ps5-201ENSMUST00000132586 393 ntBASIC2.95□□□□□ -1.94
Spg11Q3UHA3 Gm22968-201ENSMUST00000157955 118 ntBASIC2.95□□□□□ -1.94
Spg11Q3UHA3 Gm24369-201ENSMUST00000175387 96 ntBASIC2.95□□□□□ -1.94
Spg11Q3UHA3 Gm27898-201ENSMUST00000183987 80 ntBASIC2.95□□□□□ -1.94
Spg11Q3UHA3 Gm28030-201ENSMUST00000184987 138 ntBASIC2.95□□□□□ -1.94
Spg11Q3UHA3 Gm42919-201ENSMUST00000197753 1284 ntBASIC2.95□□□□□ -1.94
Spg11Q3UHA3 Gm45259-201ENSMUST00000209217 1006 ntBASIC2.95□□□□□ -1.94
Spg11Q3UHA3 Gm45356-201ENSMUST00000209274 823 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
Spg11Q3UHA3 Gm25004-201ENSMUST00000083811 161 ntBASIC2.95□□□□□ -1.94
Spg11Q3UHA3 1700017N19Rik-206ENSMUST00000190386 1483 ntTSL 5 BASIC2.95□□□□□ -1.94
Spg11Q3UHA3 Vmn2r-ps51-201ENSMUST00000177271 2461 ntBASIC2.95□□□□□ -1.94
Spg11Q3UHA3 Vmn1r77-204ENSMUST00000228213 8094 ntAPPRIS ALT2 BASIC2.95□□□□□ -1.94
Spg11Q3UHA3 Trac-201ENSMUST00000103740 413 ntAPPRIS P1 BASIC2.95□□□□□ -1.94
Spg11Q3UHA3 Gm23911-201ENSMUST00000104596 134 ntBASIC2.95□□□□□ -1.94
Spg11Q3UHA3 Gm12787-201ENSMUST00000119234 396 ntBASIC2.95□□□□□ -1.94
Spg11Q3UHA3 Olfr1379-ps1-201ENSMUST00000120726 1001 ntBASIC2.95□□□□□ -1.94
Spg11Q3UHA3 Gm17191-201ENSMUST00000165200 417 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
Spg11Q3UHA3 1700017N19Rik-207ENSMUST00000190708 1945 ntAPPRIS P1 TSL 5 BASIC2.95□□□□□ -1.94
Spg11Q3UHA3 Gm38374-201ENSMUST00000194417 2033 ntBASIC2.95□□□□□ -1.94
Spg11Q3UHA3 Gm43812-201ENSMUST00000200976 581 ntTSL 5 BASIC2.95□□□□□ -1.94
Spg11Q3UHA3 Gm19596-201ENSMUST00000203685 739 ntBASIC2.95□□□□□ -1.94
Spg11Q3UHA3 Gm21112-201ENSMUST00000212224 578 ntBASIC2.95□□□□□ -1.94
Spg11Q3UHA3 Gm7760-201ENSMUST00000212265 578 ntBASIC2.95□□□□□ -1.94
Spg11Q3UHA3 Olfr1233-203ENSMUST00000215469 1205 ntAPPRIS P1 TSL 5 BASIC2.95□□□□□ -1.94
Spg11Q3UHA3 D830005E20Rik-202ENSMUST00000219691 971 ntTSL 5 BASIC2.95□□□□□ -1.94
Spg11Q3UHA3 AV026068-237ENSMUST00000226075 572 ntBASIC2.95□□□□□ -1.94
Spg11Q3UHA3 Gm10025-201ENSMUST00000079568 372 ntBASIC2.95□□□□□ -1.94
Spg11Q3UHA3 Calcrl-202ENSMUST00000099944 3973 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
Spg11Q3UHA3 Olfr889-202ENSMUST00000217286 5673 ntAPPRIS P1 TSL 5 BASIC2.95□□□□□ -1.94
Spg11Q3UHA3 Scfd1-201ENSMUST00000021335 2096 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
Spg11Q3UHA3 Mannr-201ENSMUST00000193549 1438 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
Spg11Q3UHA3 Gm19074-201ENSMUST00000218915 1429 ntBASIC2.94□□□□□ -1.94
Spg11Q3UHA3 Gm44150-201ENSMUST00000203317 2619 ntBASIC2.94□□□□□ -1.94
Spg11Q3UHA3 Ighv9-3-201ENSMUST00000103473 351 ntAPPRIS P1 BASIC2.94□□□□□ -1.94
Spg11Q3UHA3 Trav14d-2-201ENSMUST00000103597 276 ntAPPRIS P1 BASIC2.94□□□□□ -1.94
Spg11Q3UHA3 Trav14n-2-201ENSMUST00000103623 276 ntAPPRIS P1 BASIC2.94□□□□□ -1.94
Spg11Q3UHA3 Gm12598-201ENSMUST00000117333 830 ntBASIC2.94□□□□□ -1.94
Spg11Q3UHA3 Gm11905-201ENSMUST00000117653 678 ntBASIC2.94□□□□□ -1.94
Spg11Q3UHA3 Gm10230-201ENSMUST00000119362 867 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
Spg11Q3UHA3 Gm2012-201ENSMUST00000121900 1131 ntAPPRIS P1 TSL 5 BASIC2.94□□□□□ -1.94
Spg11Q3UHA3 Ighv1-78-201ENSMUST00000163670 294 ntAPPRIS P1 BASIC2.94□□□□□ -1.94
Spg11Q3UHA3 Gm9892-201ENSMUST00000182415 992 ntBASIC2.94□□□□□ -1.94
Spg11Q3UHA3 Ms4a2-205ENSMUST00000189641 647 ntTSL 3 BASIC2.94□□□□□ -1.94
Spg11Q3UHA3 Gm44253-201ENSMUST00000203387 628 ntBASIC2.94□□□□□ -1.94
Spg11Q3UHA3 Gm19126-201ENSMUST00000207896 509 ntBASIC2.94□□□□□ -1.94
Spg11Q3UHA3 Olfr542-ps1-201ENSMUST00000211706 831 ntBASIC2.94□□□□□ -1.94
Spg11Q3UHA3 Gm7198-201ENSMUST00000219635 1074 ntBASIC2.94□□□□□ -1.94
Spg11Q3UHA3 Olfr1037-201ENSMUST00000099911 1125 ntAPPRIS P1 BASIC2.94□□□□□ -1.94
Spg11Q3UHA3 Cnot6l-210ENSMUST00000155901 8564 ntAPPRIS P3 TSL 1 (best) BASIC2.94□□□□□ -1.94
Spg11Q3UHA3 Gm37470-201ENSMUST00000193378 2798 ntBASIC2.94□□□□□ -1.94
Spg11Q3UHA3 Stag2-201ENSMUST00000069619 5825 ntAPPRIS P1 TSL 5 BASIC2.94□□□□□ -1.94
Spg11Q3UHA3 Olfr725-202ENSMUST00000206920 1519 ntAPPRIS P1 TSL 2 BASIC2.94□□□□□ -1.94
Spg11Q3UHA3 Adgrg4-204ENSMUST00000153784 9329 ntAPPRIS P5 TSL 5 BASIC2.94□□□□□ -1.94
Spg11Q3UHA3 Gm14714-201ENSMUST00000119743 439 ntBASIC2.94□□□□□ -1.94
Spg11Q3UHA3 Gm14821-201ENSMUST00000121975 435 ntBASIC2.94□□□□□ -1.94
Spg11Q3UHA3 Tnfaip8-206ENSMUST00000145726 632 ntTSL 3 BASIC2.94□□□□□ -1.94
Spg11Q3UHA3 Olfr723-201ENSMUST00000164157 1006 ntAPPRIS P1 BASIC2.94□□□□□ -1.94
Spg11Q3UHA3 Ifi213-205ENSMUST00000180215 643 ntAPPRIS P2 TSL 3 BASIC2.94□□□□□ -1.94
Spg11Q3UHA3 Gm27158-201ENSMUST00000183813 238 ntBASIC2.94□□□□□ -1.94
Spg11Q3UHA3 Mir9-1-201ENSMUST00000199907 89 ntBASIC2.94□□□□□ -1.94
Spg11Q3UHA3 Trdn-207ENSMUST00000219931 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC2.94□□□□□ -1.94
Spg11Q3UHA3 Olfr609-202ENSMUST00000216075 3429 ntAPPRIS P1 TSL 5 BASIC2.94□□□□□ -1.94
Spg11Q3UHA3 Prl7d1-203ENSMUST00000224026 3657 ntAPPRIS P2 BASIC2.94□□□□□ -1.94
Spg11Q3UHA3 Olfr847-202ENSMUST00000216839 2385 ntAPPRIS P1 TSL 3 BASIC2.94□□□□□ -1.94
Retrieved 100 of 76,532 protein–RNA pairs in 84.7 ms