Protein–RNA interactions for Protein: Q2UY11

Col28a1, Collagen alpha-1(XXVIII) chain, mousemouse

Predictions only

Length 1,141 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col28a1Q2UY11 Olfr1442-201ENSMUST00000057924 1065 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
Col28a1Q2UY11 Olfr1151-201ENSMUST00000061081 927 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
Col28a1Q2UY11 Apoo-ps-201ENSMUST00000061241 586 ntBASIC4.2□□□□□ -1.74
Col28a1Q2UY11 Olfr482-201ENSMUST00000081184 972 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
Col28a1Q2UY11 Vmn1r87-201ENSMUST00000094827 888 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
Col28a1Q2UY11 Gabrg2-203ENSMUST00000109290 2868 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
Col28a1Q2UY11 Gm38407-202ENSMUST00000219221 2391 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
Col28a1Q2UY11 Pds5b-203ENSMUST00000110486 2900 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
Col28a1Q2UY11 Vmn2r7-202ENSMUST00000161972 3583 ntAPPRIS ALT2 TSL 5 BASIC4.2□□□□□ -1.74
Col28a1Q2UY11 Olfr843-202ENSMUST00000214019 7499 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
Col28a1Q2UY11 Gm42717-201ENSMUST00000197309 3463 ntBASIC4.2□□□□□ -1.74
Col28a1Q2UY11 Olfr933-202ENSMUST00000216238 4475 ntAPPRIS P1 TSL 2 BASIC4.2□□□□□ -1.74
Col28a1Q2UY11 AI987944-202ENSMUST00000205338 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC4.2□□□□□ -1.74
Col28a1Q2UY11 4932429P05Rik-201ENSMUST00000113958 3093 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
Col28a1Q2UY11 AC120375.2-201ENSMUST00000226532 1853 ntBASIC4.2□□□□□ -1.74
Col28a1Q2UY11 Gm42967-201ENSMUST00000198647 2312 ntBASIC4.2□□□□□ -1.74
Col28a1Q2UY11 Psmc6-201ENSMUST00000022380 2234 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
Col28a1Q2UY11 Vmn1r90-207ENSMUST00000227692 7101 ntAPPRIS P2 BASIC4.19□□□□□ -1.74
Col28a1Q2UY11 Olfr916-203ENSMUST00000214093 3685 ntAPPRIS P1 TSL 3 BASIC4.19□□□□□ -1.74
Col28a1Q2UY11 Olfr1102-202ENSMUST00000214002 1806 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
Col28a1Q2UY11 Hyal5-201ENSMUST00000031689 1838 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
Col28a1Q2UY11 B230334C09Rik-201ENSMUST00000200255 8927 ntBASIC4.19□□□□□ -1.74
Col28a1Q2UY11 Vmn1r47-203ENSMUST00000227811 6792 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
Col28a1Q2UY11 AC129085.3-201ENSMUST00000225686 1705 ntBASIC4.19□□□□□ -1.74
Col28a1Q2UY11 Pbrm1-201ENSMUST00000022471 5871 ntTSL 5 BASIC4.19□□□□□ -1.74
Col28a1Q2UY11 Frmpd3-201ENSMUST00000044702 3141 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
Col28a1Q2UY11 Mir761-201ENSMUST00000103245 76 ntBASIC4.19□□□□□ -1.74
Col28a1Q2UY11 Igkv1-135-201ENSMUST00000103303 394 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
Col28a1Q2UY11 Vmn1r120-201ENSMUST00000105202 918 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
Col28a1Q2UY11 Gm12268-201ENSMUST00000118398 442 ntBASIC4.19□□□□□ -1.74
Col28a1Q2UY11 Gm9308-201ENSMUST00000119073 448 ntBASIC4.19□□□□□ -1.74
Col28a1Q2UY11 Gm11943-201ENSMUST00000119473 327 ntBASIC4.19□□□□□ -1.74
Col28a1Q2UY11 Vmn2r-ps2-201ENSMUST00000121053 765 ntBASIC4.19□□□□□ -1.74
Col28a1Q2UY11 Gm14229-201ENSMUST00000121178 850 ntBASIC4.19□□□□□ -1.74
Col28a1Q2UY11 Gm15141-201ENSMUST00000121860 729 ntBASIC4.19□□□□□ -1.74
Col28a1Q2UY11 Gm15075-201ENSMUST00000122187 477 ntBASIC4.19□□□□□ -1.74
Col28a1Q2UY11 Gm22478-201ENSMUST00000122570 154 ntBASIC4.19□□□□□ -1.74
Col28a1Q2UY11 Gm22038-201ENSMUST00000157277 242 ntBASIC4.19□□□□□ -1.74
Col28a1Q2UY11 Gm26173-201ENSMUST00000158416 136 ntBASIC4.19□□□□□ -1.74
Col28a1Q2UY11 Gm23352-201ENSMUST00000158428 64 ntBASIC4.19□□□□□ -1.74
Col28a1Q2UY11 Gm26468-201ENSMUST00000158644 106 ntBASIC4.19□□□□□ -1.74
Col28a1Q2UY11 Gm26362-201ENSMUST00000158865 315 ntBASIC4.19□□□□□ -1.74
Col28a1Q2UY11 Gm10662-201ENSMUST00000168053 942 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
Col28a1Q2UY11 Gm10074-201ENSMUST00000174543 249 ntBASIC4.19□□□□□ -1.74
Col28a1Q2UY11 Vmn1r-ps149-201ENSMUST00000176997 183 ntBASIC4.19□□□□□ -1.74
Col28a1Q2UY11 Gm5891-201ENSMUST00000179493 942 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
Col28a1Q2UY11 Gm27414-201ENSMUST00000185033 381 ntBASIC4.19□□□□□ -1.74
Col28a1Q2UY11 Gm27588-201ENSMUST00000185096 263 ntBASIC4.19□□□□□ -1.74
Col28a1Q2UY11 Gm28967-201ENSMUST00000187351 281 ntBASIC4.19□□□□□ -1.74
Col28a1Q2UY11 C230029F24Rik-202ENSMUST00000188673 554 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
Col28a1Q2UY11 Gm37889-201ENSMUST00000194174 251 ntBASIC4.19□□□□□ -1.74
Col28a1Q2UY11 Gm43730-201ENSMUST00000199863 372 ntBASIC4.19□□□□□ -1.74
Col28a1Q2UY11 Gm44009-201ENSMUST00000203539 521 ntTSL 5 BASIC4.19□□□□□ -1.74
Col28a1Q2UY11 Gm44133-201ENSMUST00000203823 701 ntTSL 2 BASIC4.19□□□□□ -1.74
Col28a1Q2UY11 Gm44754-201ENSMUST00000208155 400 ntBASIC4.19□□□□□ -1.74
Col28a1Q2UY11 Gm45400-201ENSMUST00000211603 653 ntBASIC4.19□□□□□ -1.74
Col28a1Q2UY11 Gm36445-205ENSMUST00000211729 1100 ntTSL 5 BASIC4.19□□□□□ -1.74
Col28a1Q2UY11 CT025552.2-201ENSMUST00000225497 317 ntBASIC4.19□□□□□ -1.74
Col28a1Q2UY11 AC137871.2-201ENSMUST00000226482 289 ntBASIC4.19□□□□□ -1.74
Col28a1Q2UY11 AC168062.2-201ENSMUST00000228907 422 ntBASIC4.19□□□□□ -1.74
Col28a1Q2UY11 Gm23097-201ENSMUST00000083448 105 ntBASIC4.19□□□□□ -1.74
Col28a1Q2UY11 Gm10491-201ENSMUST00000085330 117 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
Col28a1Q2UY11 Nfatc3-202ENSMUST00000211991 3712 ntAPPRIS ALT2 TSL 1 (best) BASIC4.19□□□□□ -1.74
Col28a1Q2UY11 Dnah7a-201ENSMUST00000094964 12245 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
Col28a1Q2UY11 Gm14929-201ENSMUST00000152079 1850 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
Col28a1Q2UY11 Olfr149-202ENSMUST00000215192 2806 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
Col28a1Q2UY11 Fbxl13-202ENSMUST00000115234 2143 ntTSL 5 BASIC4.19□□□□□ -1.74
Col28a1Q2UY11 AC115891.1-201ENSMUST00000215798 1755 ntBASIC4.19□□□□□ -1.74
Col28a1Q2UY11 Gm18954-201ENSMUST00000222200 1792 ntBASIC4.19□□□□□ -1.74
Col28a1Q2UY11 Olfr1000-202ENSMUST00000213837 1915 ntAPPRIS P1 TSL 3 BASIC4.19□□□□□ -1.74
Col28a1Q2UY11 Gm37363-201ENSMUST00000192336 2233 ntBASIC4.18□□□□□ -1.74
Col28a1Q2UY11 Olfr172-202ENSMUST00000214139 1778 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
Col28a1Q2UY11 Ddi1-201ENSMUST00000051706 7114 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
Col28a1Q2UY11 Gm22473-201ENSMUST00000104114 132 ntBASIC4.18□□□□□ -1.74
Col28a1Q2UY11 Gm23133-201ENSMUST00000104255 135 ntBASIC4.18□□□□□ -1.74
Col28a1Q2UY11 Gm22498-201ENSMUST00000104497 86 ntBASIC4.18□□□□□ -1.74
Col28a1Q2UY11 Gm12711-201ENSMUST00000131249 340 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
Col28a1Q2UY11 1700092C17Rik-201ENSMUST00000135792 424 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
Col28a1Q2UY11 Gm11579-201ENSMUST00000145502 845 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
Col28a1Q2UY11 Gm25667-201ENSMUST00000157701 275 ntBASIC4.18□□□□□ -1.74
Col28a1Q2UY11 Gm24939-201ENSMUST00000158325 137 ntBASIC4.18□□□□□ -1.74
Col28a1Q2UY11 Gm15796-201ENSMUST00000162135 204 ntBASIC4.18□□□□□ -1.74
Col28a1Q2UY11 Gm9587-201ENSMUST00000172449 454 ntBASIC4.18□□□□□ -1.74
Col28a1Q2UY11 Gm11168-201ENSMUST00000177722 684 ntAPPRIS P5 TSL 5 BASIC4.18□□□□□ -1.74
Col28a1Q2UY11 Gm10719-203ENSMUST00000179272 675 ntAPPRIS ALT2 TSL 5 BASIC4.18□□□□□ -1.74
Col28a1Q2UY11 Gm27760-201ENSMUST00000185048 114 ntBASIC4.18□□□□□ -1.74
Col28a1Q2UY11 Gm28191-201ENSMUST00000189112 211 ntBASIC4.18□□□□□ -1.74
Col28a1Q2UY11 Gm28924-201ENSMUST00000190012 241 ntBASIC4.18□□□□□ -1.74
Col28a1Q2UY11 Gm37571-201ENSMUST00000195048 614 ntTSL 3 BASIC4.18□□□□□ -1.74
Col28a1Q2UY11 Gm9632-201ENSMUST00000195934 643 ntBASIC4.18□□□□□ -1.74
Col28a1Q2UY11 Gm43370-201ENSMUST00000196437 284 ntBASIC4.18□□□□□ -1.74
Col28a1Q2UY11 Gm5660-201ENSMUST00000197453 1149 ntBASIC4.18□□□□□ -1.74
Col28a1Q2UY11 Gm5034-201ENSMUST00000199115 634 ntBASIC4.18□□□□□ -1.74
Col28a1Q2UY11 Gm18327-201ENSMUST00000202426 830 ntBASIC4.18□□□□□ -1.74
Col28a1Q2UY11 Gm3189-201ENSMUST00000205595 832 ntBASIC4.18□□□□□ -1.74
Col28a1Q2UY11 Gm38832-201ENSMUST00000205674 400 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
Col28a1Q2UY11 Gm45192-201ENSMUST00000206749 283 ntBASIC4.18□□□□□ -1.74
Col28a1Q2UY11 Gm44910-201ENSMUST00000208451 396 ntBASIC4.18□□□□□ -1.74
Col28a1Q2UY11 Gm45392-201ENSMUST00000210441 214 ntBASIC4.18□□□□□ -1.74
Col28a1Q2UY11 1700026F02Rik-205ENSMUST00000212266 787 ntTSL 5 BASIC4.18□□□□□ -1.74
Retrieved 100 of 76,532 protein–RNA pairs in 93.5 ms