Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Gm24567-201ENSMUST00000179294 121 ntBASIC5.39□□□□□ -1.55
Sox1P53783 Gm23943-201ENSMUST00000179712 121 ntBASIC5.39□□□□□ -1.55
Sox1P53783 Gm25156-201ENSMUST00000179809 79 ntBASIC5.39□□□□□ -1.55
Sox1P53783 Gm25228-201ENSMUST00000180121 121 ntBASIC5.39□□□□□ -1.55
Sox1P53783 Gm23304-201ENSMUST00000180209 121 ntBASIC5.39□□□□□ -1.55
Sox1P53783 Gm11395-201ENSMUST00000181011 499 ntBASIC5.39□□□□□ -1.55
Sox1P53783 Gm11394-201ENSMUST00000181421 517 ntBASIC5.39□□□□□ -1.55
Sox1P53783 1700023F02Rik-203ENSMUST00000189619 473 ntTSL 3 BASIC5.39□□□□□ -1.55
Sox1P53783 Gm2147-201ENSMUST00000193588 639 ntBASIC5.39□□□□□ -1.55
Sox1P53783 Gm43440-201ENSMUST00000201957 729 ntBASIC5.39□□□□□ -1.55
Sox1P53783 Gm44063-201ENSMUST00000203307 376 ntBASIC5.39□□□□□ -1.55
Sox1P53783 Gm43968-201ENSMUST00000203388 389 ntBASIC5.39□□□□□ -1.55
Sox1P53783 Spcs2-205ENSMUST00000207580 868 ntTSL 5 BASIC5.39□□□□□ -1.55
Sox1P53783 Gm34609-201ENSMUST00000219284 789 ntTSL 5 BASIC5.39□□□□□ -1.55
Sox1P53783 Gm10061-201ENSMUST00000073111 465 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
Sox1P53783 Dlx6os1-201ENSMUST00000159568 4608 ntTSL 5 BASIC5.39□□□□□ -1.55
Sox1P53783 Vmn1r52-208ENSMUST00000228665 3226 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
Sox1P53783 Vmn2r2-201ENSMUST00000077958 2484 ntAPPRIS P2 TSL 5 BASIC5.39□□□□□ -1.55
Sox1P53783 Clock-204ENSMUST00000202122 5508 ntAPPRIS ALT2 TSL 1 (best) BASIC5.39□□□□□ -1.55
Sox1P53783 Cyld-204ENSMUST00000209206 4032 ntTSL 5 BASIC5.39□□□□□ -1.55
Sox1P53783 Cyp2c70-201ENSMUST00000051846 1717 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
Sox1P53783 Zfp638-220ENSMUST00000204751 9033 ntAPPRIS P3 TSL 1 (best) BASIC5.39□□□□□ -1.55
Sox1P53783 Gm45426-201ENSMUST00000209393 3672 ntBASIC5.39□□□□□ -1.55
Sox1P53783 Olfr629-202ENSMUST00000213906 2548 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
Sox1P53783 Sytl2-202ENSMUST00000107210 3718 ntAPPRIS ALT2 TSL 1 (best) BASIC5.39□□□□□ -1.55
Sox1P53783 1700019J19Rik-202ENSMUST00000213583 1856 ntTSL 5 BASIC5.39□□□□□ -1.55
Sox1P53783 Gm42781-201ENSMUST00000201317 2719 ntBASIC5.39□□□□□ -1.55
Sox1P53783 Olfr1310-202ENSMUST00000213559 4897 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
Sox1P53783 Ahnak-202ENSMUST00000092956 18099 ntAPPRIS P3 TSL 1 (best) BASIC5.38□□□□□ -1.55
Sox1P53783 S100pbp-201ENSMUST00000049081 2769 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
Sox1P53783 Olfr1031-202ENSMUST00000216807 1946 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
Sox1P53783 Ereg-201ENSMUST00000031324 4128 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
Sox1P53783 Vmn1r9-202ENSMUST00000227399 6778 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
Sox1P53783 Vmn2r94-201ENSMUST00000172190 2457 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
Sox1P53783 Spam1-201ENSMUST00000031693 2013 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
Sox1P53783 Usp29-204ENSMUST00000200535 7540 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
Sox1P53783 Gm43210-201ENSMUST00000196743 6152 ntBASIC5.38□□□□□ -1.55
Sox1P53783 Myo1b-204ENSMUST00000114541 4616 ntTSL 5 BASIC5.38□□□□□ -1.55
Sox1P53783 Gm38257-201ENSMUST00000195881 2761 ntBASIC5.38□□□□□ -1.55
Sox1P53783 Gm12871-201ENSMUST00000118758 438 ntBASIC5.38□□□□□ -1.55
Sox1P53783 Gm25103-201ENSMUST00000122671 318 ntBASIC5.38□□□□□ -1.55
Sox1P53783 Gm14228-201ENSMUST00000131908 798 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
Sox1P53783 Gm15738-201ENSMUST00000131985 275 ntTSL 5 BASIC5.38□□□□□ -1.55
Sox1P53783 Gm11351-201ENSMUST00000139335 583 ntTSL 2 BASIC5.38□□□□□ -1.55
Sox1P53783 Gm12023-201ENSMUST00000145182 520 ntTSL 5 BASIC5.38□□□□□ -1.55
Sox1P53783 Gm16146-201ENSMUST00000160306 439 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
Sox1P53783 Hspe1-ps3-201ENSMUST00000172726 277 ntBASIC5.38□□□□□ -1.55
Sox1P53783 Gm22569-201ENSMUST00000175545 124 ntBASIC5.38□□□□□ -1.55
Sox1P53783 Mir5710-201ENSMUST00000176884 69 ntBASIC5.38□□□□□ -1.55
Sox1P53783 Gm20830-201ENSMUST00000178016 684 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
Sox1P53783 Gm20812-201ENSMUST00000179220 684 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
Sox1P53783 Gm27402-201ENSMUST00000183890 120 ntBASIC5.38□□□□□ -1.55
Sox1P53783 Gm28702-201ENSMUST00000188276 253 ntTSL 5 BASIC5.38□□□□□ -1.55
Sox1P53783 Gm9443-201ENSMUST00000188406 816 ntBASIC5.38□□□□□ -1.55
Sox1P53783 Gm36548-201ENSMUST00000197473 685 ntTSL 5 BASIC5.38□□□□□ -1.55
Sox1P53783 Gm44348-201ENSMUST00000200165 122 ntBASIC5.38□□□□□ -1.55
Sox1P53783 Gm32453-201ENSMUST00000204183 456 ntBASIC5.38□□□□□ -1.55
Sox1P53783 Gm44074-201ENSMUST00000204562 337 ntBASIC5.38□□□□□ -1.55
Sox1P53783 Gm45651-201ENSMUST00000210857 335 ntBASIC5.38□□□□□ -1.55
Sox1P53783 AC183268.2-201ENSMUST00000214513 446 ntBASIC5.38□□□□□ -1.55
Sox1P53783 Gm40787-201ENSMUST00000218056 317 ntTSL 3 BASIC5.38□□□□□ -1.55
Sox1P53783 AC241534.1-201ENSMUST00000218537 399 ntTSL 2 BASIC5.38□□□□□ -1.55
Sox1P53783 AC154328.1-201ENSMUST00000225875 307 ntBASIC5.38□□□□□ -1.55
Sox1P53783 AC138765.1-201ENSMUST00000228657 385 ntBASIC5.38□□□□□ -1.55
Sox1P53783 AC170600.1-201ENSMUST00000228763 277 ntBASIC5.38□□□□□ -1.55
Sox1P53783 AC098719.1-201ENSMUST00000228920 371 ntBASIC5.38□□□□□ -1.55
Sox1P53783 Olfr1031-201ENSMUST00000050942 1011 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
Sox1P53783 Gm34004-201ENSMUST00000215460 2837 ntTSL 5 BASIC5.38□□□□□ -1.55
Sox1P53783 Gm13023-201ENSMUST00000085144 1810 ntAPPRIS P3 TSL 1 (best) BASIC5.38□□□□□ -1.55
Sox1P53783 Cd33-203ENSMUST00000205503 5728 ntAPPRIS P3 TSL 1 (best) BASIC5.38□□□□□ -1.55
Sox1P53783 Olfr701-203ENSMUST00000217739 4100 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
Sox1P53783 Vmn2r61-201ENSMUST00000166131 2598 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
Sox1P53783 Gm9239-201ENSMUST00000186942 2557 ntBASIC5.38□□□□□ -1.55
Sox1P53783 Olfr391-ps-201ENSMUST00000214485 2080 ntAPPRIS P1 TSL 2 BASIC5.38□□□□□ -1.55
Sox1P53783 Tet1-206ENSMUST00000174189 14369 ntAPPRIS ALT2 TSL 5 BASIC5.38□□□□□ -1.55
Sox1P53783 AC147615.2-201ENSMUST00000219876 2154 ntBASIC5.38□□□□□ -1.55
Sox1P53783 Gm37485-201ENSMUST00000192326 2953 ntBASIC5.37□□□□□ -1.55
Sox1P53783 Olfr705-202ENSMUST00000213721 3001 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
Sox1P53783 Slc44a1-205ENSMUST00000107651 4382 ntAPPRIS ALT1 TSL 5 BASIC5.37□□□□□ -1.55
Sox1P53783 Rlf-203ENSMUST00000168615 6585 ntAPPRIS ALT2 TSL 5 BASIC5.37□□□□□ -1.55
Sox1P53783 Kcnma1-202ENSMUST00000074983 3974 ntAPPRIS ALT2 TSL 5 BASIC5.37□□□□□ -1.55
Sox1P53783 Scn1a-203ENSMUST00000112366 8386 ntAPPRIS ALT1 TSL 5 BASIC5.37□□□□□ -1.55
Sox1P53783 Fmo2-201ENSMUST00000045902 4066 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
Sox1P53783 Tcerg1-201ENSMUST00000025375 4152 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
Sox1P53783 Pramef6-202ENSMUST00000105767 1967 ntAPPRIS ALT2 TSL 5 BASIC5.37□□□□□ -1.55
Sox1P53783 Olfr635-202ENSMUST00000209473 8565 ntAPPRIS ALT2 TSL 5 BASIC5.37□□□□□ -1.55
Sox1P53783 Cc2d2b-203ENSMUST00000207801 3730 ntTSL 5 BASIC5.37□□□□□ -1.55
Sox1P53783 Gm37652-201ENSMUST00000195290 2095 ntBASIC5.37□□□□□ -1.55
Sox1P53783 Traj50-201ENSMUST00000103693 63 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
Sox1P53783 Gm15267-201ENSMUST00000120888 464 ntBASIC5.37□□□□□ -1.55
Sox1P53783 Gm25291-201ENSMUST00000122795 144 ntBASIC5.37□□□□□ -1.55
Sox1P53783 Gm14271-201ENSMUST00000137886 630 ntTSL 3 BASIC5.37□□□□□ -1.55
Sox1P53783 Gm13209-201ENSMUST00000138492 494 ntTSL 5 BASIC5.37□□□□□ -1.55
Sox1P53783 Gm23905-201ENSMUST00000157568 109 ntBASIC5.37□□□□□ -1.55
Sox1P53783 Scarna10-201ENSMUST00000158992 325 ntBASIC5.37□□□□□ -1.55
Sox1P53783 Rpl9-ps5-201ENSMUST00000174221 571 ntBASIC5.37□□□□□ -1.55
Sox1P53783 Gm6075-201ENSMUST00000186816 486 ntBASIC5.37□□□□□ -1.55
Sox1P53783 Il3-201ENSMUST00000019058 629 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
Sox1P53783 Gm37336-202ENSMUST00000193705 468 ntBASIC5.37□□□□□ -1.55
Sox1P53783 Igkv2-105-201ENSMUST00000196931 377 ntBASIC5.37□□□□□ -1.55
Retrieved 100 of 76,532 protein–RNA pairs in 72.1 ms