Protein–RNA interactions for Protein: A0A075B641

Trav8-1, T cell receptor alpha variable 8-1 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8-1A0A075B641 Gm29064-201ENSMUST00000187014 813 ntBASIC2.21□□□□□ -2.06
Trav8-1A0A075B641 Gm19774-201ENSMUST00000190667 114 ntBASIC2.21□□□□□ -2.06
Trav8-1A0A075B641 Gm28872-201ENSMUST00000191518 158 ntBASIC2.21□□□□□ -2.06
Trav8-1A0A075B641 AL603834.1-201ENSMUST00000198372 121 ntBASIC2.21□□□□□ -2.06
Trav8-1A0A075B641 Gm42983-201ENSMUST00000199879 815 ntBASIC2.21□□□□□ -2.06
Trav8-1A0A075B641 Gm6064-201ENSMUST00000203999 454 ntBASIC2.21□□□□□ -2.06
Trav8-1A0A075B641 Gm17838-201ENSMUST00000205872 876 ntBASIC2.21□□□□□ -2.06
Trav8-1A0A075B641 Gm45072-201ENSMUST00000208673 929 ntBASIC2.21□□□□□ -2.06
Trav8-1A0A075B641 AC152415.1-201ENSMUST00000213320 440 ntBASIC2.21□□□□□ -2.06
Trav8-1A0A075B641 Olfr945-202ENSMUST00000216698 1864 ntAPPRIS ALT2 TSL 5 BASIC2.21□□□□□ -2.06
Trav8-1A0A075B641 AC161254.1-201ENSMUST00000220310 3842 ntBASIC2.21□□□□□ -2.06
Trav8-1A0A075B641 Gm21007-201ENSMUST00000221024 326 ntBASIC2.21□□□□□ -2.06
Trav8-1A0A075B641 Gm9818-201ENSMUST00000050900 255 ntBASIC2.21□□□□□ -2.06
Trav8-1A0A075B641 Gm6776-201ENSMUST00000057752 900 ntBASIC2.21□□□□□ -2.06
Trav8-1A0A075B641 Gm10088-201ENSMUST00000074116 423 ntBASIC2.21□□□□□ -2.06
Trav8-1A0A075B641 Gm23297-201ENSMUST00000083184 127 ntBASIC2.21□□□□□ -2.06
Trav8-1A0A075B641 Ak6-202ENSMUST00000084721 1222 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
Trav8-1A0A075B641 Olfr1104-202ENSMUST00000214857 2693 ntAPPRIS P1 TSL 5 BASIC2.21□□□□□ -2.06
Trav8-1A0A075B641 Gm45030-201ENSMUST00000207575 1774 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
Trav8-1A0A075B641 1700049E17Rik1-201ENSMUST00000095985 1761 ntAPPRIS P1 TSL 2 BASIC2.21□□□□□ -2.06
Trav8-1A0A075B641 Gm14288-201ENSMUST00000109020 3438 ntAPPRIS P2 TSL 1 (best) BASIC2.2□□□□□ -2.06
Trav8-1A0A075B641 Olfr1256-203ENSMUST00000213833 6081 ntAPPRIS P1 TSL 3 BASIC2.2□□□□□ -2.06
Trav8-1A0A075B641 3110062G12Rik-201ENSMUST00000192113 1419 ntBASIC2.2□□□□□ -2.06
Trav8-1A0A075B641 Gm7853-201ENSMUST00000100708 478 ntBASIC2.2□□□□□ -2.06
Trav8-1A0A075B641 Gm22272-201ENSMUST00000104039 134 ntBASIC2.2□□□□□ -2.06
Trav8-1A0A075B641 Gm14975-201ENSMUST00000118741 664 ntBASIC2.2□□□□□ -2.06
Trav8-1A0A075B641 Trim30e-ps1-202ENSMUST00000151294 731 ntBASIC2.2□□□□□ -2.06
Trav8-1A0A075B641 Gm23540-201ENSMUST00000157543 164 ntBASIC2.2□□□□□ -2.06
Trav8-1A0A075B641 Gm22840-201ENSMUST00000158444 136 ntBASIC2.2□□□□□ -2.06
Trav8-1A0A075B641 Ear-ps10-201ENSMUST00000161871 460 ntBASIC2.2□□□□□ -2.06
Trav8-1A0A075B641 Gm25470-201ENSMUST00000175576 111 ntBASIC2.2□□□□□ -2.06
Trav8-1A0A075B641 Gm27538-201ENSMUST00000185065 294 ntBASIC2.2□□□□□ -2.06
Trav8-1A0A075B641 Gm28534-201ENSMUST00000187744 676 ntBASIC2.2□□□□□ -2.06
Trav8-1A0A075B641 Olfr625-ps1-202ENSMUST00000190218 927 ntAPPRIS ALT2 BASIC2.2□□□□□ -2.06
Trav8-1A0A075B641 Eif4e-205ENSMUST00000200100 729 ntTSL 3 BASIC2.2□□□□□ -2.06
Trav8-1A0A075B641 Gm43239-201ENSMUST00000200131 201 ntBASIC2.2□□□□□ -2.06
Trav8-1A0A075B641 Gm31693-201ENSMUST00000200150 909 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
Trav8-1A0A075B641 Gm44748-201ENSMUST00000206040 658 ntTSL 5 BASIC2.2□□□□□ -2.06
Trav8-1A0A075B641 Gm34811-201ENSMUST00000206580 445 ntTSL 3 BASIC2.2□□□□□ -2.06
Trav8-1A0A075B641 Olfr512-202ENSMUST00000209620 1056 ntAPPRIS P1 BASIC2.2□□□□□ -2.06
Trav8-1A0A075B641 4930558N11Rik-204ENSMUST00000211512 516 ntTSL 3 BASIC2.2□□□□□ -2.06
Trav8-1A0A075B641 Gm18363-201ENSMUST00000221671 730 ntBASIC2.2□□□□□ -2.06
Trav8-1A0A075B641 Gm17872-201ENSMUST00000222550 532 ntBASIC2.2□□□□□ -2.06
Trav8-1A0A075B641 Gm36525-201ENSMUST00000222590 638 ntTSL 5 BASIC2.2□□□□□ -2.06
Trav8-1A0A075B641 AC117656.3-205ENSMUST00000224606 1205 ntBASIC2.2□□□□□ -2.06
Trav8-1A0A075B641 AC165366.1-201ENSMUST00000225905 505 ntAPPRIS P1 BASIC2.2□□□□□ -2.06
Trav8-1A0A075B641 AC100733.1-201ENSMUST00000228494 407 ntBASIC2.2□□□□□ -2.06
Trav8-1A0A075B641 Olfr617-201ENSMUST00000048265 957 ntAPPRIS P1 BASIC2.2□□□□□ -2.06
Trav8-1A0A075B641 Olfr832-201ENSMUST00000060601 939 ntAPPRIS P1 BASIC2.2□□□□□ -2.06
Trav8-1A0A075B641 Olfr748-201ENSMUST00000073561 924 ntAPPRIS P1 BASIC2.2□□□□□ -2.06
Trav8-1A0A075B641 Olfr512-201ENSMUST00000074730 1056 ntBASIC2.2□□□□□ -2.06
Trav8-1A0A075B641 Olfr834-201ENSMUST00000086492 939 ntAPPRIS P1 BASIC2.2□□□□□ -2.06
Trav8-1A0A075B641 Olfr725-202ENSMUST00000206920 1519 ntAPPRIS P1 TSL 2 BASIC2.2□□□□□ -2.06
Trav8-1A0A075B641 Gm37515-201ENSMUST00000193321 3817 ntBASIC2.2□□□□□ -2.06
Trav8-1A0A075B641 Olfr136-202ENSMUST00000208525 2534 ntAPPRIS P1 TSL 5 BASIC2.2□□□□□ -2.06
Trav8-1A0A075B641 Rex2-201ENSMUST00000075775 3993 ntAPPRIS P1 TSL 2 BASIC2.19□□□□□ -2.06
Trav8-1A0A075B641 Vmn1r10-202ENSMUST00000228270 2084 ntAPPRIS P1 BASIC2.19□□□□□ -2.06
Trav8-1A0A075B641 Ctdspl2-202ENSMUST00000110572 4160 ntTSL 5 BASIC2.19□□□□□ -2.06
Trav8-1A0A075B641 Traj24-201ENSMUST00000103717 63 ntAPPRIS P1 BASIC2.19□□□□□ -2.06
Trav8-1A0A075B641 Snord66-201ENSMUST00000104051 75 ntBASIC2.19□□□□□ -2.06
Trav8-1A0A075B641 Gm13064-201ENSMUST00000119125 557 ntBASIC2.19□□□□□ -2.06
Trav8-1A0A075B641 Gm5963-201ENSMUST00000143451 236 ntBASIC2.19□□□□□ -2.06
Trav8-1A0A075B641 Tpo-203ENSMUST00000155263 664 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
Trav8-1A0A075B641 Gm23470-201ENSMUST00000157129 120 ntBASIC2.19□□□□□ -2.06
Trav8-1A0A075B641 Gm17194-201ENSMUST00000164610 348 ntBASIC2.19□□□□□ -2.06
Trav8-1A0A075B641 Gm3851-201ENSMUST00000168653 318 ntBASIC2.19□□□□□ -2.06
Trav8-1A0A075B641 Zfp456-202ENSMUST00000172266 679 ntTSL 3 BASIC2.19□□□□□ -2.06
Trav8-1A0A075B641 Gm26219-201ENSMUST00000175216 71 ntBASIC2.19□□□□□ -2.06
Trav8-1A0A075B641 Gm38045-201ENSMUST00000193536 199 ntTSL 5 BASIC2.19□□□□□ -2.06
Trav8-1A0A075B641 Gm6510-201ENSMUST00000195916 574 ntBASIC2.19□□□□□ -2.06
Trav8-1A0A075B641 Gm40155-201ENSMUST00000198291 818 ntTSL 3 BASIC2.19□□□□□ -2.06
Trav8-1A0A075B641 Gm18429-201ENSMUST00000198707 421 ntBASIC2.19□□□□□ -2.06
Trav8-1A0A075B641 Gm42723-202ENSMUST00000200561 1254 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
Trav8-1A0A075B641 Gm43500-201ENSMUST00000201067 312 ntTSL 5 BASIC2.19□□□□□ -2.06
Trav8-1A0A075B641 Olfr436-ps1-201ENSMUST00000203108 284 ntBASIC2.19□□□□□ -2.06
Trav8-1A0A075B641 Nasp-ps1-201ENSMUST00000205050 691 ntBASIC2.19□□□□□ -2.06
Trav8-1A0A075B641 Gm38944-201ENSMUST00000208218 512 ntTSL 2 BASIC2.19□□□□□ -2.06
Trav8-1A0A075B641 AC154510.1-201ENSMUST00000223925 737 ntBASIC2.19□□□□□ -2.06
Trav8-1A0A075B641 AV026068-224ENSMUST00000224827 928 ntBASIC2.19□□□□□ -2.06
Trav8-1A0A075B641 AC140209.1-201ENSMUST00000227875 284 ntBASIC2.19□□□□□ -2.06
Trav8-1A0A075B641 E330017A01Rik-201ENSMUST00000053249 1108 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
Trav8-1A0A075B641 Gm10042-201ENSMUST00000079884 78 ntBASIC2.19□□□□□ -2.06
Trav8-1A0A075B641 Olfr1270-204ENSMUST00000215975 4854 ntAPPRIS P1 TSL 5 BASIC2.19□□□□□ -2.06
Trav8-1A0A075B641 Zfp72-201ENSMUST00000091481 1629 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
Trav8-1A0A075B641 Rag2-201ENSMUST00000044031 3424 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
Trav8-1A0A075B641 Vmn2r71-201ENSMUST00000172338 2568 ntAPPRIS P1 TSL 5 BASIC2.19□□□□□ -2.06
Trav8-1A0A075B641 Tlr3-202ENSMUST00000167106 4093 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
Trav8-1A0A075B641 Olfr789-202ENSMUST00000213992 4421 ntAPPRIS P1 TSL 5 BASIC2.19□□□□□ -2.06
Trav8-1A0A075B641 Spata31-201ENSMUST00000070216 3232 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
Trav8-1A0A075B641 Gm37928-201ENSMUST00000193265 4131 ntBASIC2.19□□□□□ -2.06
Trav8-1A0A075B641 Vmn1r185-211ENSMUST00000228467 6915 ntAPPRIS P1 BASIC2.18□□□□□ -2.06
Trav8-1A0A075B641 Gm30292-201ENSMUST00000194198 3000 ntTSL 3 BASIC2.18□□□□□ -2.06
Trav8-1A0A075B641 Mdga2-211ENSMUST00000222623 1449 ntTSL 5 BASIC2.18□□□□□ -2.06
Trav8-1A0A075B641 Zfp534-201ENSMUST00000117638 2885 ntAPPRIS P1 TSL 2 BASIC2.18□□□□□ -2.06
Trav8-1A0A075B641 Gm45033-201ENSMUST00000206710 3167 ntBASIC2.18□□□□□ -2.06
Trav8-1A0A075B641 Snord14c-201ENSMUST00000101927 86 ntBASIC2.18□□□□□ -2.06
Trav8-1A0A075B641 Gm22758-201ENSMUST00000102275 96 ntBASIC2.18□□□□□ -2.06
Trav8-1A0A075B641 Igkv9-129-201ENSMUST00000103308 350 ntAPPRIS ALT2 BASIC2.18□□□□□ -2.06
Trav8-1A0A075B641 Gm24987-201ENSMUST00000104453 134 ntBASIC2.18□□□□□ -2.06
Trav8-1A0A075B641 Olfr1196-201ENSMUST00000104892 945 ntAPPRIS P1 BASIC2.18□□□□□ -2.06
Retrieved 100 of 76,532 protein–RNA pairs in 88 ms