Protein–RNA interactions for Protein: Q91XZ7

Pcdhb3, Protocadherin beta 3, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb3Q91XZ7 Il18rap-201ENSMUST00000027237 4889 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
Pcdhb3Q91XZ7 Mtx3-201ENSMUST00000076169 6275 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.46
Pcdhb3Q91XZ7 Gabrq-201ENSMUST00000033711 2000 ntAPPRIS P3 TSL 1 (best) BASIC5.96□□□□□ -1.46
Pcdhb3Q91XZ7 Gm8750-201ENSMUST00000173278 1537 ntBASIC5.95□□□□□ -1.46
Pcdhb3Q91XZ7 Bclaf1-203ENSMUST00000185800 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC5.95□□□□□ -1.46
Pcdhb3Q91XZ7 Gm3604-201ENSMUST00000107989 1677 ntTSL 5 BASIC5.95□□□□□ -1.46
Pcdhb3Q91XZ7 Pot1a-201ENSMUST00000115327 2447 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
Pcdhb3Q91XZ7 Vmn2r-ps40-201ENSMUST00000174438 2558 ntBASIC5.95□□□□□ -1.46
Pcdhb3Q91XZ7 Dach2-204ENSMUST00000113380 2894 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
Pcdhb3Q91XZ7 Akap11-202ENSMUST00000123853 9364 ntAPPRIS P3 TSL 5 BASIC5.95□□□□□ -1.46
Pcdhb3Q91XZ7 Abi3bp-201ENSMUST00000048471 4687 ntAPPRIS P4 TSL 1 (best) BASIC5.95□□□□□ -1.46
Pcdhb3Q91XZ7 Traj17-201ENSMUST00000103724 63 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
Pcdhb3Q91XZ7 Gm23294-201ENSMUST00000104150 164 ntBASIC5.95□□□□□ -1.46
Pcdhb3Q91XZ7 Gm24989-201ENSMUST00000104461 88 ntBASIC5.95□□□□□ -1.46
Pcdhb3Q91XZ7 Gm11271-201ENSMUST00000116054 440 ntBASIC5.95□□□□□ -1.46
Pcdhb3Q91XZ7 Hspe1-ps5-201ENSMUST00000118080 297 ntBASIC5.95□□□□□ -1.46
Pcdhb3Q91XZ7 Gm11633-201ENSMUST00000118176 444 ntBASIC5.95□□□□□ -1.46
Pcdhb3Q91XZ7 Gm14018-201ENSMUST00000119042 455 ntBASIC5.95□□□□□ -1.46
Pcdhb3Q91XZ7 Gm12779-201ENSMUST00000121496 143 ntBASIC5.95□□□□□ -1.46
Pcdhb3Q91XZ7 Gm13028-201ENSMUST00000128563 277 ntTSL 3 BASIC5.95□□□□□ -1.46
Pcdhb3Q91XZ7 Scgn-202ENSMUST00000142826 470 ntTSL 5 BASIC5.95□□□□□ -1.46
Pcdhb3Q91XZ7 Gm24441-201ENSMUST00000157235 281 ntBASIC5.95□□□□□ -1.46
Pcdhb3Q91XZ7 Gm23537-201ENSMUST00000157536 330 ntBASIC5.95□□□□□ -1.46
Pcdhb3Q91XZ7 Gm4845-201ENSMUST00000179202 562 ntBASIC5.95□□□□□ -1.46
Pcdhb3Q91XZ7 Gm26585-201ENSMUST00000180890 630 ntBASIC5.95□□□□□ -1.46
Pcdhb3Q91XZ7 Rpl9-ps1-202ENSMUST00000182502 576 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
Pcdhb3Q91XZ7 Mir6393-201ENSMUST00000183709 94 ntBASIC5.95□□□□□ -1.46
Pcdhb3Q91XZ7 Mir3473e-201ENSMUST00000183932 110 ntBASIC5.95□□□□□ -1.46
Pcdhb3Q91XZ7 Mir6346-201ENSMUST00000183982 81 ntBASIC5.95□□□□□ -1.46
Pcdhb3Q91XZ7 Gm8241-201ENSMUST00000189286 816 ntBASIC5.95□□□□□ -1.46
Pcdhb3Q91XZ7 Gm38076-201ENSMUST00000193889 450 ntBASIC5.95□□□□□ -1.46
Pcdhb3Q91XZ7 Gm32158-201ENSMUST00000200135 404 ntBASIC5.95□□□□□ -1.46
Pcdhb3Q91XZ7 Gm45127-201ENSMUST00000205984 1015 ntBASIC5.95□□□□□ -1.46
Pcdhb3Q91XZ7 Gm18600-201ENSMUST00000207205 505 ntBASIC5.95□□□□□ -1.46
Pcdhb3Q91XZ7 Gm45044-201ENSMUST00000208078 396 ntTSL 5 BASIC5.95□□□□□ -1.46
Pcdhb3Q91XZ7 AC124772.1-201ENSMUST00000221325 151 ntBASIC5.95□□□□□ -1.46
Pcdhb3Q91XZ7 AC132324.1-201ENSMUST00000221855 584 ntTSL 5 BASIC5.95□□□□□ -1.46
Pcdhb3Q91XZ7 AC134917.2-201ENSMUST00000223354 124 ntBASIC5.95□□□□□ -1.46
Pcdhb3Q91XZ7 AC174797.2-203ENSMUST00000224017 716 ntBASIC5.95□□□□□ -1.46
Pcdhb3Q91XZ7 Rpl21-ps13-201ENSMUST00000072532 483 ntBASIC5.95□□□□□ -1.46
Pcdhb3Q91XZ7 Gm26446-201ENSMUST00000082455 103 ntBASIC5.95□□□□□ -1.46
Pcdhb3Q91XZ7 Snora30-201ENSMUST00000083325 130 ntBASIC5.95□□□□□ -1.46
Pcdhb3Q91XZ7 BC100530-201ENSMUST00000096089 619 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
Pcdhb3Q91XZ7 Olfr1295-203ENSMUST00000217772 5539 ntAPPRIS P1 TSL 5 BASIC5.95□□□□□ -1.46
Pcdhb3Q91XZ7 Tmprss15-201ENSMUST00000023566 4177 ntAPPRIS P3 TSL 1 (best) BASIC5.95□□□□□ -1.46
Pcdhb3Q91XZ7 Gm42524-201ENSMUST00000202881 2214 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
Pcdhb3Q91XZ7 Bche-201ENSMUST00000029367 6210 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
Pcdhb3Q91XZ7 A930017M01Rik-201ENSMUST00000081361 2884 ntBASIC5.95□□□□□ -1.46
Pcdhb3Q91XZ7 Vmn1r87-204ENSMUST00000228800 1993 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
Pcdhb3Q91XZ7 Cdh6-201ENSMUST00000036439 8167 ntAPPRIS P1 TSL 5 BASIC5.95□□□□□ -1.46
Pcdhb3Q91XZ7 Gm27008-201ENSMUST00000182400 1360 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
Pcdhb3Q91XZ7 Usp47-202ENSMUST00000210309 5816 ntAPPRIS ALT2 TSL 1 (best) BASIC5.94□□□□□ -1.46
Pcdhb3Q91XZ7 Olfr963-202ENSMUST00000215649 2203 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
Pcdhb3Q91XZ7 Vmn2r76-201ENSMUST00000165771 2562 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
Pcdhb3Q91XZ7 Sorbs2-231ENSMUST00000171337 5651 ntAPPRIS P4 TSL 1 (best) BASIC5.94□□□□□ -1.46
Pcdhb3Q91XZ7 Mir667-201ENSMUST00000102441 92 ntBASIC5.94□□□□□ -1.46
Pcdhb3Q91XZ7 Trav14d-3-dv8-201ENSMUST00000103608 456 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
Pcdhb3Q91XZ7 Gm3033-201ENSMUST00000112792 438 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
Pcdhb3Q91XZ7 Prdx2-rs3-201ENSMUST00000117259 594 ntBASIC5.94□□□□□ -1.46
Pcdhb3Q91XZ7 Gm12438-201ENSMUST00000122034 336 ntBASIC5.94□□□□□ -1.46
Pcdhb3Q91XZ7 Gm15643-201ENSMUST00000126556 383 ntTSL 3 BASIC5.94□□□□□ -1.46
Pcdhb3Q91XZ7 Olfr406-201ENSMUST00000133561 1101 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
Pcdhb3Q91XZ7 Gm13601-201ENSMUST00000142314 404 ntTSL 3 BASIC5.94□□□□□ -1.46
Pcdhb3Q91XZ7 Gm15401-203ENSMUST00000156497 378 ntTSL 3 BASIC5.94□□□□□ -1.46
Pcdhb3Q91XZ7 Gm25374-201ENSMUST00000158158 101 ntBASIC5.94□□□□□ -1.46
Pcdhb3Q91XZ7 Gm17153-201ENSMUST00000171314 490 ntBASIC5.94□□□□□ -1.46
Pcdhb3Q91XZ7 Gm20475-201ENSMUST00000174884 263 ntTSL 3 BASIC5.94□□□□□ -1.46
Pcdhb3Q91XZ7 Rps12-ps21-201ENSMUST00000178172 402 ntBASIC5.94□□□□□ -1.46
Pcdhb3Q91XZ7 Gm24168-201ENSMUST00000178825 107 ntBASIC5.94□□□□□ -1.46
Pcdhb3Q91XZ7 Gm25235-201ENSMUST00000179933 107 ntBASIC5.94□□□□□ -1.46
Pcdhb3Q91XZ7 Gm29062-201ENSMUST00000186032 694 ntBASIC5.94□□□□□ -1.46
Pcdhb3Q91XZ7 Gm38069-201ENSMUST00000195360 2144 ntBASIC5.94□□□□□ -1.46
Pcdhb3Q91XZ7 Gm44085-201ENSMUST00000205056 372 ntTSL 3 BASIC5.94□□□□□ -1.46
Pcdhb3Q91XZ7 Gm32817-201ENSMUST00000210007 689 ntTSL 5 BASIC5.94□□□□□ -1.46
Pcdhb3Q91XZ7 AC153361.2-201ENSMUST00000218188 481 ntTSL 5 BASIC5.94□□□□□ -1.46
Pcdhb3Q91XZ7 AC137902.1-201ENSMUST00000228184 102 ntBASIC5.94□□□□□ -1.46
Pcdhb3Q91XZ7 S100a11-201ENSMUST00000029515 511 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
Pcdhb3Q91XZ7 Gm26442-201ENSMUST00000082588 153 ntBASIC5.94□□□□□ -1.46
Pcdhb3Q91XZ7 Dennd4c-204ENSMUST00000142837 5870 ntAPPRIS P2 TSL 1 (best) BASIC5.94□□□□□ -1.46
Pcdhb3Q91XZ7 Il22ra2-201ENSMUST00000036564 2498 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
Pcdhb3Q91XZ7 AC121598.3-201ENSMUST00000227179 1643 ntBASIC5.94□□□□□ -1.46
Pcdhb3Q91XZ7 Gm37488-201ENSMUST00000195434 3374 ntBASIC5.94□□□□□ -1.46
Pcdhb3Q91XZ7 Scn2a-202ENSMUST00000100067 8690 ntAPPRIS P3 TSL 5 BASIC5.94□□□□□ -1.46
Pcdhb3Q91XZ7 Gm43834-201ENSMUST00000197097 4830 ntBASIC5.94□□□□□ -1.46
Pcdhb3Q91XZ7 Pirb-201ENSMUST00000078451 3824 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
Pcdhb3Q91XZ7 Gbp7-201ENSMUST00000045097 5614 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
Pcdhb3Q91XZ7 Olfr178-202ENSMUST00000206523 2095 ntAPPRIS P1 TSL 3 BASIC5.94□□□□□ -1.46
Pcdhb3Q91XZ7 E330014E10Rik-201ENSMUST00000071182 2476 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
Pcdhb3Q91XZ7 Jade3-202ENSMUST00000115384 4866 ntAPPRIS P2 TSL 1 (best) BASIC5.93□□□□□ -1.46
Pcdhb3Q91XZ7 Gm5832-201ENSMUST00000121704 1582 ntBASIC5.93□□□□□ -1.46
Pcdhb3Q91XZ7 Ccar1-201ENSMUST00000020268 4352 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
Pcdhb3Q91XZ7 Gm3978-201ENSMUST00000163406 2512 ntBASIC5.93□□□□□ -1.46
Pcdhb3Q91XZ7 AC131586.2-202ENSMUST00000227016 2705 ntBASIC5.93□□□□□ -1.46
Pcdhb3Q91XZ7 Uty-204ENSMUST00000139365 4684 ntAPPRIS ALT2 TSL 1 (best) BASIC5.93□□□□□ -1.46
Pcdhb3Q91XZ7 Tom1l1-204ENSMUST00000107869 1826 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
Pcdhb3Q91XZ7 4932411K12Rik-201ENSMUST00000190493 3156 ntTSL 2 BASIC5.93□□□□□ -1.46
Pcdhb3Q91XZ7 Olfr447-202ENSMUST00000216408 3185 ntAPPRIS P1 TSL 5 BASIC5.93□□□□□ -1.46
Pcdhb3Q91XZ7 AC112972.2-201ENSMUST00000228702 2210 ntBASIC5.93□□□□□ -1.46
Pcdhb3Q91XZ7 Gm8761-201ENSMUST00000121507 955 ntBASIC5.93□□□□□ -1.46
Pcdhb3Q91XZ7 Gm12701-201ENSMUST00000134206 659 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
Retrieved 100 of 76,532 protein–RNA pairs in 62.8 ms