Protein–RNA interactions for Protein: Q69ZI1

Sh3rf1, E3 ubiquitin-protein ligase SH3RF1, mousemouse

Predictions only

Length 892 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf1Q69ZI1 Gm21916-202ENSMUST00000187044 174 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
Sh3rf1Q69ZI1 Gm29839-201ENSMUST00000187045 174 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
Sh3rf1Q69ZI1 Gm28442-201ENSMUST00000187052 174 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
Sh3rf1Q69ZI1 Gm21780-202ENSMUST00000187110 174 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
Sh3rf1Q69ZI1 Gm29656-201ENSMUST00000187236 174 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
Sh3rf1Q69ZI1 Gm21821-202ENSMUST00000187288 175 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
Sh3rf1Q69ZI1 Gm28886-201ENSMUST00000187350 174 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
Sh3rf1Q69ZI1 Gm21599-202ENSMUST00000187381 174 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
Sh3rf1Q69ZI1 Gm28128-201ENSMUST00000187403 174 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
Sh3rf1Q69ZI1 Gm21450-201ENSMUST00000187408 174 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
Sh3rf1Q69ZI1 Gm28194-201ENSMUST00000187412 484 ntBASIC5.33□□□□□ -1.56
Sh3rf1Q69ZI1 Gm28689-201ENSMUST00000187441 174 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
Sh3rf1Q69ZI1 Gm18117-201ENSMUST00000187720 742 ntBASIC5.33□□□□□ -1.56
Sh3rf1Q69ZI1 Gm28851-201ENSMUST00000187800 174 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
Sh3rf1Q69ZI1 Gm28886-202ENSMUST00000187889 484 ntBASIC5.33□□□□□ -1.56
Sh3rf1Q69ZI1 Gm28554-201ENSMUST00000187964 174 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
Sh3rf1Q69ZI1 Gm28984-201ENSMUST00000188202 174 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
Sh3rf1Q69ZI1 Gm21529-202ENSMUST00000188473 174 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
Sh3rf1Q69ZI1 Gm28604-202ENSMUST00000188638 174 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
Sh3rf1Q69ZI1 Gm21588-202ENSMUST00000188721 174 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
Sh3rf1Q69ZI1 Gm21539-202ENSMUST00000188764 174 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
Sh3rf1Q69ZI1 Gm28216-201ENSMUST00000188785 174 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
Sh3rf1Q69ZI1 Gm29645-201ENSMUST00000189117 174 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
Sh3rf1Q69ZI1 Gm28554-202ENSMUST00000189175 484 ntBASIC5.33□□□□□ -1.56
Sh3rf1Q69ZI1 Gm21413-201ENSMUST00000189224 174 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
Sh3rf1Q69ZI1 Gm21723-202ENSMUST00000189444 174 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
Sh3rf1Q69ZI1 Gm36782-201ENSMUST00000189459 174 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
Sh3rf1Q69ZI1 Gm21419-201ENSMUST00000189495 173 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
Sh3rf1Q69ZI1 Gm28566-202ENSMUST00000189532 174 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
Sh3rf1Q69ZI1 Gm28319-201ENSMUST00000189560 226 ntTSL 5 BASIC5.33□□□□□ -1.56
Sh3rf1Q69ZI1 Gm29213-202ENSMUST00000189703 484 ntBASIC5.33□□□□□ -1.56
Sh3rf1Q69ZI1 Gm21626-202ENSMUST00000189751 174 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
Sh3rf1Q69ZI1 Gm28851-202ENSMUST00000189757 484 ntBASIC5.33□□□□□ -1.56
Sh3rf1Q69ZI1 Gm28656-201ENSMUST00000190017 174 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
Sh3rf1Q69ZI1 Gm28461-201ENSMUST00000190023 484 ntBASIC5.33□□□□□ -1.56
Sh3rf1Q69ZI1 Gm21562-202ENSMUST00000190314 174 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
Sh3rf1Q69ZI1 Gm28517-201ENSMUST00000190343 174 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
Sh3rf1Q69ZI1 Gm29531-201ENSMUST00000190569 174 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
Sh3rf1Q69ZI1 Gm21914-202ENSMUST00000190577 174 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
Sh3rf1Q69ZI1 Gm20978-201ENSMUST00000190688 174 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
Sh3rf1Q69ZI1 Gm20963-201ENSMUST00000190880 174 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
Sh3rf1Q69ZI1 Gm29316-201ENSMUST00000190953 174 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
Sh3rf1Q69ZI1 Gm29351-201ENSMUST00000191052 174 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
Sh3rf1Q69ZI1 Gm29466-201ENSMUST00000191077 174 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
Sh3rf1Q69ZI1 Gm20987-201ENSMUST00000191165 174 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
Sh3rf1Q69ZI1 Gm28194-202ENSMUST00000191217 174 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
Sh3rf1Q69ZI1 Gm28461-202ENSMUST00000191406 174 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
Sh3rf1Q69ZI1 Gm37927-201ENSMUST00000192238 174 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
Sh3rf1Q69ZI1 Gm37544-201ENSMUST00000192803 174 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
Sh3rf1Q69ZI1 Gm37635-201ENSMUST00000193129 174 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
Sh3rf1Q69ZI1 Gm21809-202ENSMUST00000194072 174 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
Sh3rf1Q69ZI1 Igkv14-134-1-201ENSMUST00000199111 331 ntBASIC5.33□□□□□ -1.56
Sh3rf1Q69ZI1 4930596I21Rik-201ENSMUST00000200494 461 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
Sh3rf1Q69ZI1 Olfr662-ps1-201ENSMUST00000210704 396 ntBASIC5.33□□□□□ -1.56
Sh3rf1Q69ZI1 Gm45368-202ENSMUST00000210944 416 ntTSL 5 BASIC5.33□□□□□ -1.56
Sh3rf1Q69ZI1 Gm35262-201ENSMUST00000215133 267 ntBASIC5.33□□□□□ -1.56
Sh3rf1Q69ZI1 Gm18541-201ENSMUST00000215935 538 ntBASIC5.33□□□□□ -1.56
Sh3rf1Q69ZI1 Gm35371-201ENSMUST00000216204 579 ntTSL 5 BASIC5.33□□□□□ -1.56
Sh3rf1Q69ZI1 Rpl26-ps6-201ENSMUST00000216693 434 ntBASIC5.33□□□□□ -1.56
Sh3rf1Q69ZI1 Gm36543-201ENSMUST00000217933 542 ntTSL 5 BASIC5.33□□□□□ -1.56
Sh3rf1Q69ZI1 AC163033.1-201ENSMUST00000218608 157 ntBASIC5.33□□□□□ -1.56
Sh3rf1Q69ZI1 Gm8158-201ENSMUST00000219220 465 ntBASIC5.33□□□□□ -1.56
Sh3rf1Q69ZI1 Gm8249-201ENSMUST00000219225 465 ntBASIC5.33□□□□□ -1.56
Sh3rf1Q69ZI1 Gm8112-201ENSMUST00000219637 465 ntBASIC5.33□□□□□ -1.56
Sh3rf1Q69ZI1 AC165092.3-201ENSMUST00000223602 282 ntBASIC5.33□□□□□ -1.56
Sh3rf1Q69ZI1 AC139758.1-201ENSMUST00000226573 930 ntBASIC5.33□□□□□ -1.56
Sh3rf1Q69ZI1 Sprr2d-201ENSMUST00000047477 681 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
Sh3rf1Q69ZI1 Sprr2f-201ENSMUST00000050397 609 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
Sh3rf1Q69ZI1 Olfr705-201ENSMUST00000060879 951 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
Sh3rf1Q69ZI1 Gm23459-201ENSMUST00000083259 131 ntBASIC5.33□□□□□ -1.56
Sh3rf1Q69ZI1 Gm10635-201ENSMUST00000217201 3721 ntTSL 2 BASIC5.33□□□□□ -1.56
Sh3rf1Q69ZI1 Gm26582-201ENSMUST00000181481 3135 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
Sh3rf1Q69ZI1 Gm37762-201ENSMUST00000194515 3561 ntBASIC5.33□□□□□ -1.56
Sh3rf1Q69ZI1 Rbm46-203ENSMUST00000182818 2115 ntTSL 5 BASIC5.33□□□□□ -1.56
Sh3rf1Q69ZI1 Hmcn1-202ENSMUST00000137197 16554 ntTSL 5 BASIC5.33□□□□□ -1.56
Sh3rf1Q69ZI1 Olfr970-202ENSMUST00000213975 1630 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
Sh3rf1Q69ZI1 Gm35755-201ENSMUST00000222392 2077 ntBASIC5.33□□□□□ -1.56
Sh3rf1Q69ZI1 Gm37738-201ENSMUST00000192396 4716 ntBASIC5.33□□□□□ -1.56
Sh3rf1Q69ZI1 AC164102.1-201ENSMUST00000220524 1553 ntBASIC5.33□□□□□ -1.56
Sh3rf1Q69ZI1 Akr1c14-201ENSMUST00000041768 2436 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
Sh3rf1Q69ZI1 Cyp4a12a-201ENSMUST00000084343 2422 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
Sh3rf1Q69ZI1 Tlr13-201ENSMUST00000040065 4060 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
Sh3rf1Q69ZI1 Gm20667-201ENSMUST00000175674 1930 ntBASIC5.33□□□□□ -1.56
Sh3rf1Q69ZI1 Btbd35f23-201ENSMUST00000189190 1943 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
Sh3rf1Q69ZI1 Gm37357-201ENSMUST00000192386 3123 ntBASIC5.32□□□□□ -1.56
Sh3rf1Q69ZI1 CT009733.2-202ENSMUST00000224171 4748 ntBASIC5.32□□□□□ -1.56
Sh3rf1Q69ZI1 Gm9923-201ENSMUST00000217785 1836 ntBASIC5.32□□□□□ -1.56
Sh3rf1Q69ZI1 Gm13089-201ENSMUST00000073532 1807 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
Sh3rf1Q69ZI1 Gm43426-201ENSMUST00000197287 2597 ntBASIC5.32□□□□□ -1.56
Sh3rf1Q69ZI1 Olfr1242-202ENSMUST00000111540 2189 ntAPPRIS P1 TSL 3 BASIC5.32□□□□□ -1.56
Sh3rf1Q69ZI1 Olfr701-203ENSMUST00000217739 4100 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
Sh3rf1Q69ZI1 Hmgb1-203ENSMUST00000110505 1720 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
Sh3rf1Q69ZI1 Zfhx4-201ENSMUST00000026284 13874 ntAPPRIS P2 TSL 5 BASIC5.32□□□□□ -1.56
Sh3rf1Q69ZI1 AC123705.3-201ENSMUST00000223531 2069 ntBASIC5.32□□□□□ -1.56
Sh3rf1Q69ZI1 Defb30-201ENSMUST00000100490 307 ntAPPRIS P2 TSL 1 (best) BASIC5.32□□□□□ -1.56
Sh3rf1Q69ZI1 Zfp972-203ENSMUST00000108986 192 ntTSL 5 BASIC5.32□□□□□ -1.56
Sh3rf1Q69ZI1 Hmgn2l6-201ENSMUST00000115986 267 ntBASIC5.32□□□□□ -1.56
Sh3rf1Q69ZI1 Gm12808-201ENSMUST00000120597 404 ntBASIC5.32□□□□□ -1.56
Sh3rf1Q69ZI1 Gm14129-201ENSMUST00000122436 291 ntBASIC5.32□□□□□ -1.56
Sh3rf1Q69ZI1 Gm23837-201ENSMUST00000122656 286 ntBASIC5.32□□□□□ -1.56
Retrieved 100 of 76,532 protein–RNA pairs in 83.8 ms