Protein–RNA interactions for Protein: Q5NCC3

Trim41, E3 ubiquitin-protein ligase TRIM41, mousemouse

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim41Q5NCC3 Gm10058-202ENSMUST00000178152 639 ntAPPRIS P1 TSL 5 BASIC9.53□□□□□ -0.88
Trim41Q5NCC3 Gm10096-201ENSMUST00000178672 639 ntAPPRIS P1 TSL 5 BASIC9.53□□□□□ -0.88
Trim41Q5NCC3 Gm10230-202ENSMUST00000178745 639 ntAPPRIS P1 TSL 5 BASIC9.53□□□□□ -0.88
Trim41Q5NCC3 Gm2092-201ENSMUST00000178887 639 ntBASIC9.53□□□□□ -0.88
Trim41Q5NCC3 Gm10147-202ENSMUST00000178966 639 ntAPPRIS P1 TSL 5 BASIC9.53□□□□□ -0.88
Trim41Q5NCC3 Vmn2r-ps20-201ENSMUST00000179853 382 ntBASIC9.53□□□□□ -0.88
Trim41Q5NCC3 Gm2759-201ENSMUST00000179938 639 ntBASIC9.53□□□□□ -0.88
Trim41Q5NCC3 Gm18828-202ENSMUST00000181035 310 ntBASIC9.53□□□□□ -0.88
Trim41Q5NCC3 Pou6f2-206ENSMUST00000184299 793 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Trim41Q5NCC3 Gm28785-201ENSMUST00000187478 379 ntBASIC9.53□□□□□ -0.88
Trim41Q5NCC3 Gm29522-201ENSMUST00000191530 621 ntTSL 5 BASIC9.53□□□□□ -0.88
Trim41Q5NCC3 Kcnmb2-206ENSMUST00000194796 338 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Trim41Q5NCC3 Gm8940-201ENSMUST00000212585 219 ntBASIC9.53□□□□□ -0.88
Trim41Q5NCC3 Gm5955-201ENSMUST00000222712 219 ntBASIC9.53□□□□□ -0.88
Trim41Q5NCC3 Olfr447-202ENSMUST00000216408 3185 ntAPPRIS P1 TSL 5 BASIC9.53□□□□□ -0.88
Trim41Q5NCC3 Sgip1-203ENSMUST00000080728 3712 ntAPPRIS P3 TSL 1 (best) BASIC9.53□□□□□ -0.88
Trim41Q5NCC3 Gm7697-201ENSMUST00000201500 2507 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Trim41Q5NCC3 Nfib-202ENSMUST00000064770 8429 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Trim41Q5NCC3 Gm43485-201ENSMUST00000199292 1710 ntBASIC9.53□□□□□ -0.88
Trim41Q5NCC3 Wdr64-202ENSMUST00000171939 3823 ntAPPRIS ALT2 TSL 5 BASIC9.53□□□□□ -0.88
Trim41Q5NCC3 C230085N15Rik-201ENSMUST00000194893 4327 ntBASIC9.52□□□□□ -0.88
Trim41Q5NCC3 Vezt-204ENSMUST00000119818 11138 ntAPPRIS ALT2 TSL 1 (best) BASIC9.52□□□□□ -0.88
Trim41Q5NCC3 AC151831.1-201ENSMUST00000227609 4033 ntBASIC9.52□□□□□ -0.89
Trim41Q5NCC3 Heph-202ENSMUST00000079322 3904 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Trim41Q5NCC3 Gm14792-201ENSMUST00000119725 258 ntBASIC9.52□□□□□ -0.89
Trim41Q5NCC3 Gm14656-201ENSMUST00000120342 502 ntBASIC9.52□□□□□ -0.89
Trim41Q5NCC3 Gm13209-201ENSMUST00000138492 494 ntTSL 5 BASIC9.52□□□□□ -0.89
Trim41Q5NCC3 Gm24780-201ENSMUST00000157635 143 ntBASIC9.52□□□□□ -0.89
Trim41Q5NCC3 Gm24745-201ENSMUST00000157840 85 ntBASIC9.52□□□□□ -0.89
Trim41Q5NCC3 Gm7097-201ENSMUST00000161841 491 ntTSL 3 BASIC9.52□□□□□ -0.89
Trim41Q5NCC3 Gm17191-201ENSMUST00000165200 417 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Trim41Q5NCC3 Gypc-201ENSMUST00000172434 612 ntAPPRIS ALT2 TSL 5 BASIC9.52□□□□□ -0.89
Trim41Q5NCC3 Vmn2r-ps34-201ENSMUST00000177433 904 ntBASIC9.52□□□□□ -0.89
Trim41Q5NCC3 Gm21834-201ENSMUST00000178907 453 ntAPPRIS P1 BASIC9.52□□□□□ -0.89
Trim41Q5NCC3 Gm37029-201ENSMUST00000195773 239 ntBASIC9.52□□□□□ -0.89
Trim41Q5NCC3 Trav7d-5-201ENSMUST00000197128 340 ntAPPRIS P1 BASIC9.52□□□□□ -0.89
Trim41Q5NCC3 Trav7n-5-201ENSMUST00000199753 340 ntAPPRIS P1 BASIC9.52□□□□□ -0.89
Trim41Q5NCC3 Gm45721-201ENSMUST00000212267 607 ntTSL 3 BASIC9.52□□□□□ -0.89
Trim41Q5NCC3 Olfr250-202ENSMUST00000216168 3969 ntAPPRIS ALT2 TSL 5 BASIC9.52□□□□□ -0.89
Trim41Q5NCC3 CT009718.4-201ENSMUST00000221881 109 ntBASIC9.52□□□□□ -0.89
Trim41Q5NCC3 Lgalsl-201ENSMUST00000047028 3362 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Trim41Q5NCC3 Ythdc1-201ENSMUST00000038384 2960 ntAPPRIS P3 TSL 5 BASIC9.52□□□□□ -0.89
Trim41Q5NCC3 Gm42727-201ENSMUST00000202446 2823 ntBASIC9.52□□□□□ -0.89
Trim41Q5NCC3 Abi3bp-201ENSMUST00000048471 4687 ntAPPRIS P4 TSL 1 (best) BASIC9.52□□□□□ -0.89
Trim41Q5NCC3 AC187103.2-201ENSMUST00000223605 1617 ntBASIC9.52□□□□□ -0.89
Trim41Q5NCC3 Gm14857-201ENSMUST00000117862 3185 ntBASIC9.52□□□□□ -0.89
Trim41Q5NCC3 Usp25-201ENSMUST00000023580 4412 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Trim41Q5NCC3 B530045E10Rik-204ENSMUST00000220146 3244 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Trim41Q5NCC3 C87414-201ENSMUST00000076321 1847 ntAPPRIS ALT2 TSL 1 (best) BASIC9.52□□□□□ -0.89
Trim41Q5NCC3 Trip12-201ENSMUST00000027421 9632 ntAPPRIS P2 TSL 5 BASIC9.52□□□□□ -0.89
Trim41Q5NCC3 Gm37775-201ENSMUST00000194120 2313 ntBASIC9.51□□□□□ -0.89
Trim41Q5NCC3 Olfr1166-202ENSMUST00000217575 2004 ntAPPRIS P1 TSL 5 BASIC9.51□□□□□ -0.89
Trim41Q5NCC3 AC151734.1-201ENSMUST00000227023 1740 ntBASIC9.51□□□□□ -0.89
Trim41Q5NCC3 Gm12845-201ENSMUST00000203629 1767 ntAPPRIS P5 TSL 5 BASIC9.51□□□□□ -0.89
Trim41Q5NCC3 Olfr1131-202ENSMUST00000213302 1779 ntAPPRIS P1 TSL 5 BASIC9.51□□□□□ -0.89
Trim41Q5NCC3 Gm14628-201ENSMUST00000117508 635 ntBASIC9.51□□□□□ -0.89
Trim41Q5NCC3 Hmgb1-ps4-201ENSMUST00000118281 635 ntBASIC9.51□□□□□ -0.89
Trim41Q5NCC3 Gm14049-201ENSMUST00000121009 636 ntBASIC9.51□□□□□ -0.89
Trim41Q5NCC3 Gm14228-201ENSMUST00000131908 798 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Trim41Q5NCC3 Mir3066-201ENSMUST00000175296 83 ntBASIC9.51□□□□□ -0.89
Trim41Q5NCC3 Gm44370-201ENSMUST00000175436 112 ntBASIC9.51□□□□□ -0.89
Trim41Q5NCC3 Gm25156-201ENSMUST00000179809 79 ntBASIC9.51□□□□□ -0.89
Trim41Q5NCC3 Gm27551-201ENSMUST00000184258 77 ntBASIC9.51□□□□□ -0.89
Trim41Q5NCC3 Mir6391-201ENSMUST00000184391 104 ntBASIC9.51□□□□□ -0.89
Trim41Q5NCC3 Gm28792-201ENSMUST00000191482 419 ntTSL 3 BASIC9.51□□□□□ -0.89
Trim41Q5NCC3 Gm37338-201ENSMUST00000191986 127 ntBASIC9.51□□□□□ -0.89
Trim41Q5NCC3 Gm38040-201ENSMUST00000193505 225 ntBASIC9.51□□□□□ -0.89
Trim41Q5NCC3 Gm42828-201ENSMUST00000199669 469 ntBASIC9.51□□□□□ -0.89
Trim41Q5NCC3 Gm43262-201ENSMUST00000202970 1219 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Trim41Q5NCC3 Gm19177-201ENSMUST00000204520 613 ntBASIC9.51□□□□□ -0.89
Trim41Q5NCC3 CT485612.4-201ENSMUST00000223405 250 ntBASIC9.51□□□□□ -0.89
Trim41Q5NCC3 AC133598.3-201ENSMUST00000224322 568 ntBASIC9.51□□□□□ -0.89
Trim41Q5NCC3 Erich6b-201ENSMUST00000022579 869 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Trim41Q5NCC3 AC165284.1-201ENSMUST00000228614 458 ntBASIC9.51□□□□□ -0.89
Trim41Q5NCC3 Olfr1009-201ENSMUST00000055517 945 ntAPPRIS P1 BASIC9.51□□□□□ -0.89
Trim41Q5NCC3 Olfr1302-202ENSMUST00000214708 2461 ntAPPRIS ALT2 TSL 5 BASIC9.51□□□□□ -0.89
Trim41Q5NCC3 Xpo7-203ENSMUST00000226448 3663 ntBASIC9.51□□□□□ -0.89
Trim41Q5NCC3 Gm19113-201ENSMUST00000217552 1828 ntBASIC9.51□□□□□ -0.89
Trim41Q5NCC3 Ino80d-201ENSMUST00000097718 13675 ntTSL 5 BASIC9.51□□□□□ -0.89
Trim41Q5NCC3 Hbp1-201ENSMUST00000167458 2733 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Trim41Q5NCC3 Cyp4a31-201ENSMUST00000030480 2396 ntTSL 2 BASIC9.51□□□□□ -0.89
Trim41Q5NCC3 Slco1c1-203ENSMUST00000203140 2771 ntAPPRIS ALT2 TSL 5 BASIC9.51□□□□□ -0.89
Trim41Q5NCC3 Vmn1r171-210ENSMUST00000228484 2421 ntAPPRIS ALT2 BASIC9.51□□□□□ -0.89
Trim41Q5NCC3 Celf2-204ENSMUST00000114924 8738 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Trim41Q5NCC3 Ifi208-201ENSMUST00000085876 2990 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Trim41Q5NCC3 E330013P04Rik-201ENSMUST00000065383 2070 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Trim41Q5NCC3 Zmynd11-201ENSMUST00000062658 3796 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Trim41Q5NCC3 Vmn1r6-206ENSMUST00000227847 8073 ntAPPRIS P2 BASIC9.5□□□□□ -0.89
Trim41Q5NCC3 Hdac9-205ENSMUST00000209902 7940 ntAPPRIS ALT2 TSL 5 BASIC9.5□□□□□ -0.89
Trim41Q5NCC3 AU023762-203ENSMUST00000209897 2179 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Trim41Q5NCC3 Gm29260-201ENSMUST00000186391 2759 ntTSL 3 BASIC9.5□□□□□ -0.89
Trim41Q5NCC3 Olfr373-203ENSMUST00000215198 3923 ntAPPRIS P1 TSL 5 BASIC9.5□□□□□ -0.89
Trim41Q5NCC3 Ptprz1-204ENSMUST00000202102 4947 ntAPPRIS ALT2 TSL 1 (best) BASIC9.5□□□□□ -0.89
Trim41Q5NCC3 Olfr901-202ENSMUST00000216502 2639 ntAPPRIS P1 TSL 3 BASIC9.5□□□□□ -0.89
Trim41Q5NCC3 Gm5415-201ENSMUST00000171322 3609 ntAPPRIS P1 BASIC9.5□□□□□ -0.89
Trim41Q5NCC3 Gm24403-201ENSMUST00000104616 130 ntBASIC9.5□□□□□ -0.89
Trim41Q5NCC3 Gm12850-201ENSMUST00000119210 436 ntBASIC9.5□□□□□ -0.89
Trim41Q5NCC3 Gm11582-201ENSMUST00000121041 236 ntBASIC9.5□□□□□ -0.89
Trim41Q5NCC3 Gm16114-201ENSMUST00000161930 300 ntBASIC9.5□□□□□ -0.89
Trim41Q5NCC3 Ear-ps4-201ENSMUST00000166834 450 ntBASIC9.5□□□□□ -0.89
Retrieved 100 of 76,532 protein–RNA pairs in 80.7 ms