Protein–RNA interactions for Protein: P18828

Sdc1, Syndecan-1, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1P18828 Gm25560-201ENSMUST00000104606 176 ntBASIC3.01□□□□□ -1.93
Sdc1P18828 5033423K11Rik-201ENSMUST00000117311 787 ntBASIC3.01□□□□□ -1.93
Sdc1P18828 Gm14627-201ENSMUST00000118931 567 ntBASIC3.01□□□□□ -1.93
Sdc1P18828 Rps10-ps3-201ENSMUST00000122317 500 ntBASIC3.01□□□□□ -1.93
Sdc1P18828 Gm11534-201ENSMUST00000125956 204 ntTSL 3 BASIC3.01□□□□□ -1.93
Sdc1P18828 Gm25341-201ENSMUST00000157461 268 ntBASIC3.01□□□□□ -1.93
Sdc1P18828 Gm25906-201ENSMUST00000158489 126 ntBASIC3.01□□□□□ -1.93
Sdc1P18828 Gm3077-201ENSMUST00000165903 627 ntBASIC3.01□□□□□ -1.93
Sdc1P18828 Gm7335-201ENSMUST00000172475 373 ntBASIC3.01□□□□□ -1.93
Sdc1P18828 Mir5127-201ENSMUST00000175295 71 ntBASIC3.01□□□□□ -1.93
Sdc1P18828 Gm13249-201ENSMUST00000177803 345 ntBASIC3.01□□□□□ -1.93
Sdc1P18828 Gm8247-202ENSMUST00000178759 375 ntAPPRIS ALT2 TSL 5 BASIC3.01□□□□□ -1.93
Sdc1P18828 Gm22252-201ENSMUST00000179316 79 ntBASIC3.01□□□□□ -1.93
Sdc1P18828 Gm13144-201ENSMUST00000179385 345 ntBASIC3.01□□□□□ -1.93
Sdc1P18828 Gm27648-201ENSMUST00000184315 107 ntBASIC3.01□□□□□ -1.93
Sdc1P18828 Mir6914-201ENSMUST00000184999 69 ntBASIC3.01□□□□□ -1.93
Sdc1P18828 Snhg14-208ENSMUST00000188262 687 ntTSL 5 BASIC3.01□□□□□ -1.93
Sdc1P18828 4921511E07Rik-201ENSMUST00000194790 827 ntBASIC3.01□□□□□ -1.93
Sdc1P18828 Ighv1-17-1-201ENSMUST00000194849 351 ntBASIC3.01□□□□□ -1.93
Sdc1P18828 Gm19080-201ENSMUST00000196082 550 ntBASIC3.01□□□□□ -1.93
Sdc1P18828 Gm44795-201ENSMUST00000205496 319 ntBASIC3.01□□□□□ -1.93
Sdc1P18828 AC166343.1-201ENSMUST00000213261 577 ntBASIC3.01□□□□□ -1.93
Sdc1P18828 AC122301.3-201ENSMUST00000217707 716 ntTSL 5 BASIC3.01□□□□□ -1.93
Sdc1P18828 Gm18363-201ENSMUST00000221671 730 ntBASIC3.01□□□□□ -1.93
Sdc1P18828 AC134254.5-201ENSMUST00000223436 400 ntBASIC3.01□□□□□ -1.93
Sdc1P18828 Vmn1r36-202ENSMUST00000226635 918 ntAPPRIS P2 BASIC3.01□□□□□ -1.93
Sdc1P18828 AC166574.3-201ENSMUST00000226725 367 ntBASIC3.01□□□□□ -1.93
Sdc1P18828 Stfa2-201ENSMUST00000023619 423 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
Sdc1P18828 Defb1-201ENSMUST00000051017 872 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
Sdc1P18828 Olfr1489-201ENSMUST00000053113 1111 ntAPPRIS P1 BASIC3.01□□□□□ -1.93
Sdc1P18828 Art2b-201ENSMUST00000063920 870 ntAPPRIS P2 TSL 1 (best) BASIC3.01□□□□□ -1.93
Sdc1P18828 Olfr1469-201ENSMUST00000077538 930 ntAPPRIS P1 BASIC3.01□□□□□ -1.93
Sdc1P18828 Gm23628-201ENSMUST00000082464 173 ntBASIC3.01□□□□□ -1.93
Sdc1P18828 n-R5s173-201ENSMUST00000082620 119 ntBASIC3.01□□□□□ -1.93
Sdc1P18828 Gm25004-201ENSMUST00000083811 161 ntBASIC3.01□□□□□ -1.93
Sdc1P18828 Olfr877-201ENSMUST00000086063 936 ntAPPRIS P1 BASIC3.01□□□□□ -1.93
Sdc1P18828 Vmn1r194-201ENSMUST00000091737 891 ntAPPRIS P1 BASIC3.01□□□□□ -1.93
Sdc1P18828 Olfr661-201ENSMUST00000098168 964 ntAPPRIS P1 BASIC3.01□□□□□ -1.93
Sdc1P18828 Olfr146-203ENSMUST00000214410 1651 ntAPPRIS P1 TSL 5 BASIC3.01□□□□□ -1.93
Sdc1P18828 Macf1-203ENSMUST00000097897 23495 ntAPPRIS P2 TSL 1 (best) BASIC3□□□□□ -1.93
Sdc1P18828 Gm43268-201ENSMUST00000201536 4055 ntBASIC3□□□□□ -1.93
Sdc1P18828 Gm28465-202ENSMUST00000220779 1701 ntTSL 5 BASIC3□□□□□ -1.93
Sdc1P18828 n-R5s16-201ENSMUST00000104555 119 ntBASIC3□□□□□ -1.93
Sdc1P18828 Gm5938-201ENSMUST00000114030 775 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
Sdc1P18828 Ssxb9-201ENSMUST00000115584 879 ntAPPRIS P1 TSL 5 BASIC3□□□□□ -1.93
Sdc1P18828 Tcea1-ps1-201ENSMUST00000117942 904 ntBASIC3□□□□□ -1.93
Sdc1P18828 Hmgb1-ps4-201ENSMUST00000118281 635 ntBASIC3□□□□□ -1.93
Sdc1P18828 Gm11446-201ENSMUST00000121319 866 ntBASIC3□□□□□ -1.93
Sdc1P18828 Gm15157-201ENSMUST00000121852 702 ntBASIC3□□□□□ -1.93
Sdc1P18828 Gm11583-201ENSMUST00000132296 466 ntTSL 5 BASIC3□□□□□ -1.93
Sdc1P18828 Gm15905-201ENSMUST00000137042 298 ntBASIC3□□□□□ -1.93
Sdc1P18828 Cyp3a25-202ENSMUST00000138870 513 ntTSL 3 BASIC3□□□□□ -1.93
Sdc1P18828 1700073E17Rik-202ENSMUST00000146858 382 ntTSL 1 (best) BASIC3□□□□□ -1.93
Sdc1P18828 4930421P07Rik-201ENSMUST00000147322 399 ntBASIC3□□□□□ -1.93
Sdc1P18828 1700019E08Rik-202ENSMUST00000153567 635 ntTSL 1 (best) BASIC3□□□□□ -1.93
Sdc1P18828 Gm24059-201ENSMUST00000157493 312 ntBASIC3□□□□□ -1.93
Sdc1P18828 Gm26036-201ENSMUST00000158149 144 ntBASIC3□□□□□ -1.93
Sdc1P18828 Gm15838-201ENSMUST00000161575 180 ntBASIC3□□□□□ -1.93
Sdc1P18828 Gm20693-201ENSMUST00000177431 211 ntBASIC3□□□□□ -1.93
Sdc1P18828 Gm28153-201ENSMUST00000189853 629 ntTSL 3 BASIC3□□□□□ -1.93
Sdc1P18828 Gm18150-201ENSMUST00000195341 645 ntBASIC3□□□□□ -1.93
Sdc1P18828 Gm2053-201ENSMUST00000195671 631 ntBASIC3□□□□□ -1.93
Sdc1P18828 Gm35876-201ENSMUST00000205044 459 ntBASIC3□□□□□ -1.93
Sdc1P18828 Gm45778-201ENSMUST00000211959 153 ntBASIC3□□□□□ -1.93
Sdc1P18828 Olfr879-ps1-201ENSMUST00000212455 694 ntBASIC3□□□□□ -1.93
Sdc1P18828 Gm18043-201ENSMUST00000216741 739 ntBASIC3□□□□□ -1.93
Sdc1P18828 AC124399.1-201ENSMUST00000218334 590 ntBASIC3□□□□□ -1.93
Sdc1P18828 AC109180.1-201ENSMUST00000218676 398 ntBASIC3□□□□□ -1.93
Sdc1P18828 Gm8158-201ENSMUST00000219220 465 ntBASIC3□□□□□ -1.93
Sdc1P18828 Gm8112-201ENSMUST00000219637 465 ntBASIC3□□□□□ -1.93
Sdc1P18828 Gm19233-201ENSMUST00000219772 936 ntBASIC3□□□□□ -1.93
Sdc1P18828 Gm18120-201ENSMUST00000220079 511 ntBASIC3□□□□□ -1.93
Sdc1P18828 Gm34081-201ENSMUST00000221332 690 ntTSL 5 BASIC3□□□□□ -1.93
Sdc1P18828 AC118006.2-201ENSMUST00000224167 962 ntBASIC3□□□□□ -1.93
Sdc1P18828 AC133654.1-201ENSMUST00000228411 672 ntBASIC3□□□□□ -1.93
Sdc1P18828 Stap1-201ENSMUST00000031171 909 ntTSL 1 (best) BASIC3□□□□□ -1.93
Sdc1P18828 Sult6b1-201ENSMUST00000042683 839 ntTSL 5 BASIC3□□□□□ -1.93
Sdc1P18828 Olfr844-201ENSMUST00000054106 930 ntBASIC3□□□□□ -1.93
Sdc1P18828 Krtap31-2-201ENSMUST00000058761 935 ntAPPRIS P1 BASIC3□□□□□ -1.93
Sdc1P18828 Gm4894-201ENSMUST00000067007 357 ntAPPRIS P1 TSL 5 BASIC3□□□□□ -1.93
Sdc1P18828 Gm23443-201ENSMUST00000082916 128 ntBASIC3□□□□□ -1.93
Sdc1P18828 Gm10553-201ENSMUST00000097669 372 ntAPPRIS P1 BASIC3□□□□□ -1.93
Sdc1P18828 Olfr681-201ENSMUST00000098157 948 ntAPPRIS P1 BASIC3□□□□□ -1.93
Sdc1P18828 Olfr679-201ENSMUST00000098158 952 ntAPPRIS P1 BASIC3□□□□□ -1.93
Sdc1P18828 Glra2-201ENSMUST00000058787 3150 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
Sdc1P18828 Gm14308-203ENSMUST00000119149 1458 ntTSL 1 (best) BASIC3□□□□□ -1.93
Sdc1P18828 Gm14434-202ENSMUST00000120959 1458 ntTSL 1 (best) BASIC3□□□□□ -1.93
Sdc1P18828 Gm42701-201ENSMUST00000196117 1657 ntBASIC3□□□□□ -1.93
Sdc1P18828 A830019L24Rik-201ENSMUST00000197226 1652 ntTSL 1 (best) BASIC3□□□□□ -1.93
Sdc1P18828 Prl7d1-203ENSMUST00000224026 3657 ntAPPRIS P2 BASIC3□□□□□ -1.93
Sdc1P18828 Olfr910-201ENSMUST00000215122 1996 ntAPPRIS P1 TSL 5 BASIC3□□□□□ -1.93
Sdc1P18828 Olfr732-202ENSMUST00000213701 3862 ntAPPRIS P1 TSL 5 BASIC2.99□□□□□ -1.93
Sdc1P18828 Oog1-202ENSMUST00000222112 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC2.99□□□□□ -1.93
Sdc1P18828 Pate3-201ENSMUST00000178236 1329 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
Sdc1P18828 Dock11-203ENSMUST00000115266 6047 ntTSL 5 BASIC2.99□□□□□ -1.93
Sdc1P18828 Vmn1r77-204ENSMUST00000228213 8094 ntAPPRIS ALT2 BASIC2.99□□□□□ -1.93
Sdc1P18828 Gm21034-201ENSMUST00000207390 2608 ntBASIC2.99□□□□□ -1.93
Sdc1P18828 Gm21035-201ENSMUST00000207867 2608 ntBASIC2.99□□□□□ -1.93
Sdc1P18828 Olfr109-203ENSMUST00000214938 5550 ntAPPRIS P1 TSL 5 BASIC2.99□□□□□ -1.93
Sdc1P18828 Olfr765-202ENSMUST00000216460 2594 ntAPPRIS P1 TSL 5 BASIC2.99□□□□□ -1.93
Retrieved 100 of 76,532 protein–RNA pairs in 66.5 ms