Protein–RNA interactions for Protein: P11416

Rara, Retinoic acid receptor alpha, mousemouse

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RaraP11416 Vmn1r71-206ENSMUST00000228098 7165 ntAPPRIS P2 BASIC5.61□□□□□ -1.51
RaraP11416 Clec5a-202ENSMUST00000101491 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
RaraP11416 Mrgprb1-201ENSMUST00000094384 4185 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
RaraP11416 Ankar-202ENSMUST00000211837 4543 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
RaraP11416 Igkv9-129-201ENSMUST00000103308 350 ntAPPRIS ALT2 BASIC5.61□□□□□ -1.51
RaraP11416 Gm8424-201ENSMUST00000117716 988 ntBASIC5.61□□□□□ -1.51
RaraP11416 Gm11830-201ENSMUST00000120175 561 ntBASIC5.61□□□□□ -1.51
RaraP11416 Gm11388-201ENSMUST00000120908 159 ntBASIC5.61□□□□□ -1.51
RaraP11416 Gm23213-201ENSMUST00000122715 313 ntBASIC5.61□□□□□ -1.51
RaraP11416 Gm13528-201ENSMUST00000139288 410 ntTSL 2 BASIC5.61□□□□□ -1.51
RaraP11416 Gm3362-201ENSMUST00000148102 466 ntBASIC5.61□□□□□ -1.51
RaraP11416 Gm23169-201ENSMUST00000157157 112 ntBASIC5.61□□□□□ -1.51
RaraP11416 Gm23499-201ENSMUST00000157736 268 ntBASIC5.61□□□□□ -1.51
RaraP11416 Ear10-201ENSMUST00000159175 678 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
RaraP11416 Vmn1r126-201ENSMUST00000168398 966 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
RaraP11416 Ccr2-204ENSMUST00000171719 2265 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
RaraP11416 Mir3090-201ENSMUST00000175597 87 ntBASIC5.61□□□□□ -1.51
RaraP11416 Gm23660-201ENSMUST00000178362 79 ntBASIC5.61□□□□□ -1.51
RaraP11416 Gm24088-201ENSMUST00000179100 79 ntBASIC5.61□□□□□ -1.51
RaraP11416 Mir6417-201ENSMUST00000183815 116 ntBASIC5.61□□□□□ -1.51
RaraP11416 1700025M24Rik-203ENSMUST00000191524 725 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
RaraP11416 Gm37070-201ENSMUST00000193272 460 ntBASIC5.61□□□□□ -1.51
RaraP11416 Gm37659-201ENSMUST00000194574 111 ntBASIC5.61□□□□□ -1.51
RaraP11416 Gm19666-201ENSMUST00000198176 1893 ntBASIC5.61□□□□□ -1.51
RaraP11416 Trav15n-3-201ENSMUST00000200498 168 ntBASIC5.61□□□□□ -1.51
RaraP11416 Gm32453-201ENSMUST00000204183 456 ntBASIC5.61□□□□□ -1.51
RaraP11416 Olfr1478-ps1-201ENSMUST00000208393 391 ntBASIC5.61□□□□□ -1.51
RaraP11416 Olfr753-ps1-203ENSMUST00000208970 2764 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
RaraP11416 Gm6012-201ENSMUST00000210821 730 ntBASIC5.61□□□□□ -1.51
RaraP11416 Gm18854-201ENSMUST00000211196 329 ntBASIC5.61□□□□□ -1.51
RaraP11416 AC158232.1-202ENSMUST00000218352 3343 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
RaraP11416 AC164164.2-201ENSMUST00000221809 785 ntBASIC5.61□□□□□ -1.51
RaraP11416 AC174797.2-203ENSMUST00000224017 716 ntBASIC5.61□□□□□ -1.51
RaraP11416 Nat1-201ENSMUST00000026677 1347 ntAPPRIS P2 BASIC5.61□□□□□ -1.51
RaraP11416 Defb42-201ENSMUST00000067990 618 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
RaraP11416 Usp26-201ENSMUST00000069509 4120 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
RaraP11416 Olfr1369-ps1-201ENSMUST00000079050 954 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
RaraP11416 Mir331-201ENSMUST00000083673 96 ntBASIC5.61□□□□□ -1.51
RaraP11416 Vmn2r50-202ENSMUST00000086298 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
RaraP11416 Gm10666-201ENSMUST00000098722 966 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
RaraP11416 Vmn1r114-201ENSMUST00000098737 966 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
RaraP11416 Vmn1r93-201ENSMUST00000098747 966 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
RaraP11416 Il1rapl1-203ENSMUST00000113966 9133 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
RaraP11416 Lin7c-201ENSMUST00000028583 4228 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
RaraP11416 AC153532.3-201ENSMUST00000218660 3848 ntBASIC5.61□□□□□ -1.51
RaraP11416 Olfr13-202ENSMUST00000216179 3677 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
RaraP11416 Ifi208-201ENSMUST00000085876 2990 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
RaraP11416 Vcam1-201ENSMUST00000029574 3469 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
RaraP11416 Ckap5-201ENSMUST00000046769 6511 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
RaraP11416 Olfr1057-202ENSMUST00000217435 3249 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
RaraP11416 Chd9-201ENSMUST00000048665 12008 ntAPPRIS P3 TSL 1 (best) BASIC5.6□□□□□ -1.51
RaraP11416 Macf1-204ENSMUST00000106213 18957 ntTSL 5 BASIC5.6□□□□□ -1.51
RaraP11416 Flrt2-201ENSMUST00000057324 7099 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
RaraP11416 Olfr1338-203ENSMUST00000216559 2829 ntAPPRIS ALT1 TSL 5 BASIC5.6□□□□□ -1.51
RaraP11416 Olfr767-202ENSMUST00000213579 5493 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
RaraP11416 Gm43130-201ENSMUST00000197721 3907 ntBASIC5.6□□□□□ -1.51
RaraP11416 Trav6-1-201ENSMUST00000103571 338 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
RaraP11416 Trav14d-3-dv8-201ENSMUST00000103608 456 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
RaraP11416 Iglv3-201ENSMUST00000103751 381 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
RaraP11416 Gm12255-201ENSMUST00000117184 284 ntBASIC5.6□□□□□ -1.51
RaraP11416 Vmn1r-ps125-201ENSMUST00000117767 290 ntBASIC5.6□□□□□ -1.51
RaraP11416 Gm6584-201ENSMUST00000119671 447 ntBASIC5.6□□□□□ -1.51
RaraP11416 Gm5401-201ENSMUST00000122444 365 ntBASIC5.6□□□□□ -1.51
RaraP11416 Serf1-202ENSMUST00000129014 543 ntAPPRIS P1 TSL 3 BASIC5.6□□□□□ -1.51
RaraP11416 Gm12023-201ENSMUST00000145182 520 ntTSL 5 BASIC5.6□□□□□ -1.51
RaraP11416 Gm15327-202ENSMUST00000153958 467 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
RaraP11416 Gm14637-201ENSMUST00000156516 444 ntTSL 2 BASIC5.6□□□□□ -1.51
RaraP11416 Gm22596-201ENSMUST00000157601 316 ntBASIC5.6□□□□□ -1.51
RaraP11416 Mir5099-201ENSMUST00000175257 74 ntBASIC5.6□□□□□ -1.51
RaraP11416 Gm23799-201ENSMUST00000175559 120 ntBASIC5.6□□□□□ -1.51
RaraP11416 Mir7211-201ENSMUST00000184071 63 ntBASIC5.6□□□□□ -1.51
RaraP11416 Mir6986-201ENSMUST00000184483 58 ntBASIC5.6□□□□□ -1.51
RaraP11416 Vmn2r-ps149-201ENSMUST00000188423 590 ntBASIC5.6□□□□□ -1.51
RaraP11416 Gm37030-201ENSMUST00000194254 295 ntBASIC5.6□□□□□ -1.51
RaraP11416 Gm44348-201ENSMUST00000200165 122 ntBASIC5.6□□□□□ -1.51
RaraP11416 Gm45150-201ENSMUST00000206051 467 ntBASIC5.6□□□□□ -1.51
RaraP11416 Gm45820-201ENSMUST00000212068 362 ntTSL 3 BASIC5.6□□□□□ -1.51
RaraP11416 Gm31698-202ENSMUST00000214385 527 ntTSL 5 BASIC5.6□□□□□ -1.51
RaraP11416 AC132474.2-201ENSMUST00000217414 573 ntTSL 5 BASIC5.6□□□□□ -1.51
RaraP11416 AC238676.3-201ENSMUST00000223042 154 ntBASIC5.6□□□□□ -1.51
RaraP11416 CT009600.1-201ENSMUST00000228771 337 ntBASIC5.6□□□□□ -1.51
RaraP11416 Olfr1176-201ENSMUST00000057439 949 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
RaraP11416 Gm10064-201ENSMUST00000071235 399 ntBASIC5.6□□□□□ -1.51
RaraP11416 Gprc6a-202ENSMUST00000218684 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
RaraP11416 Gm4211-201ENSMUST00000181103 2220 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
RaraP11416 Vmn2r-ps102-201ENSMUST00000222577 2203 ntBASIC5.6□□□□□ -1.51
RaraP11416 Gm4759-201ENSMUST00000183414 6622 ntBASIC5.6□□□□□ -1.51
RaraP11416 Olfr266-202ENSMUST00000213616 2195 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
RaraP11416 Gm37726-201ENSMUST00000193246 3886 ntBASIC5.6□□□□□ -1.51
RaraP11416 Gm43428-201ENSMUST00000200108 3845 ntBASIC5.6□□□□□ -1.51
RaraP11416 Rnf2-204ENSMUST00000187048 3201 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
RaraP11416 Kcnu1-201ENSMUST00000098858 3536 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
RaraP11416 Tmem67-201ENSMUST00000050686 3456 ntAPPRIS P2 TSL 1 (best) BASIC5.59□□□□□ -1.51
RaraP11416 Dlg1-204ENSMUST00000115196 3418 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
RaraP11416 Prrc2c-202ENSMUST00000182149 11289 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.51
RaraP11416 Olfr1321-202ENSMUST00000215373 4482 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
RaraP11416 Gm12739-201ENSMUST00000119769 382 ntBASIC5.59□□□□□ -1.51
RaraP11416 Gm11229-201ENSMUST00000121993 437 ntBASIC5.59□□□□□ -1.51
RaraP11416 Gm6956-201ENSMUST00000134724 546 ntBASIC5.59□□□□□ -1.51
RaraP11416 Mir3964-201ENSMUST00000174898 74 ntBASIC5.59□□□□□ -1.51
Retrieved 100 of 76,532 protein–RNA pairs in 91.9 ms