Protein–RNA interactions for Protein: Q9D1C8

Vps28, Vacuolar protein sorting-associated protein 28 homolog, mousemouse

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps28Q9D1C8 Olfr987-203ENSMUST00000216347 1453 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
Vps28Q9D1C8 Gm42486-201ENSMUST00000200369 3486 ntBASIC4.25□□□□□ -1.73
Vps28Q9D1C8 Gm7489-201ENSMUST00000100666 1222 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
Vps28Q9D1C8 Tcrg-C1-201ENSMUST00000103558 924 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
Vps28Q9D1C8 Traj31-201ENSMUST00000103710 57 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
Vps28Q9D1C8 Iglv3-201ENSMUST00000103751 381 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
Vps28Q9D1C8 Gm26019-201ENSMUST00000104407 119 ntBASIC4.25□□□□□ -1.73
Vps28Q9D1C8 Med21-203ENSMUST00000111650 572 ntTSL 2 BASIC4.25□□□□□ -1.73
Vps28Q9D1C8 Gm15195-201ENSMUST00000118775 263 ntBASIC4.25□□□□□ -1.73
Vps28Q9D1C8 Gm13603-201ENSMUST00000119404 83 ntBASIC4.25□□□□□ -1.73
Vps28Q9D1C8 Clec2f-201ENSMUST00000121051 374 ntBASIC4.25□□□□□ -1.73
Vps28Q9D1C8 Gm12340-201ENSMUST00000121617 462 ntBASIC4.25□□□□□ -1.73
Vps28Q9D1C8 Gm13555-201ENSMUST00000121668 319 ntBASIC4.25□□□□□ -1.73
Vps28Q9D1C8 Cyp3a25-202ENSMUST00000138870 513 ntTSL 3 BASIC4.25□□□□□ -1.73
Vps28Q9D1C8 Gm5963-201ENSMUST00000143451 236 ntBASIC4.25□□□□□ -1.73
Vps28Q9D1C8 Gm22135-201ENSMUST00000158752 108 ntBASIC4.25□□□□□ -1.73
Vps28Q9D1C8 Vmn2r-ps122-201ENSMUST00000176687 906 ntBASIC4.25□□□□□ -1.73
Vps28Q9D1C8 Gm5974-201ENSMUST00000181607 986 ntBASIC4.25□□□□□ -1.73
Vps28Q9D1C8 Gm21294-201ENSMUST00000186443 934 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
Vps28Q9D1C8 Gm20888-202ENSMUST00000186890 919 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
Vps28Q9D1C8 Gm5372-201ENSMUST00000187540 409 ntBASIC4.25□□□□□ -1.73
Vps28Q9D1C8 Gm21497-201ENSMUST00000189455 919 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
Vps28Q9D1C8 Gm28153-201ENSMUST00000189853 629 ntTSL 3 BASIC4.25□□□□□ -1.73
Vps28Q9D1C8 Gm20811-201ENSMUST00000190500 553 ntBASIC4.25□□□□□ -1.73
Vps28Q9D1C8 Gm37253-201ENSMUST00000195679 562 ntTSL 5 BASIC4.25□□□□□ -1.73
Vps28Q9D1C8 Gm43892-201ENSMUST00000204373 265 ntBASIC4.25□□□□□ -1.73
Vps28Q9D1C8 Klra13-ps-204ENSMUST00000205252 640 ntTSL 3 BASIC4.25□□□□□ -1.73
Vps28Q9D1C8 Gm44521-201ENSMUST00000206469 217 ntBASIC4.25□□□□□ -1.73
Vps28Q9D1C8 Gm44724-202ENSMUST00000208251 531 ntTSL 5 BASIC4.25□□□□□ -1.73
Vps28Q9D1C8 1700026F02Rik-205ENSMUST00000212266 787 ntTSL 5 BASIC4.25□□□□□ -1.73
Vps28Q9D1C8 Olfr1244-ps1-201ENSMUST00000213226 683 ntBASIC4.25□□□□□ -1.73
Vps28Q9D1C8 Gm18016-201ENSMUST00000216119 801 ntBASIC4.25□□□□□ -1.73
Vps28Q9D1C8 Gm46103-201ENSMUST00000217614 341 ntBASIC4.25□□□□□ -1.73
Vps28Q9D1C8 Gm18892-201ENSMUST00000217628 881 ntBASIC4.25□□□□□ -1.73
Vps28Q9D1C8 AC158523.1-201ENSMUST00000221398 328 ntBASIC4.25□□□□□ -1.73
Vps28Q9D1C8 AC122448.1-201ENSMUST00000226317 772 ntBASIC4.25□□□□□ -1.73
Vps28Q9D1C8 AC117202.1-201ENSMUST00000227007 445 ntBASIC4.25□□□□□ -1.73
Vps28Q9D1C8 AC144819.1-201ENSMUST00000227015 620 ntBASIC4.25□□□□□ -1.73
Vps28Q9D1C8 AC150560.3-201ENSMUST00000227442 455 ntBASIC4.25□□□□□ -1.73
Vps28Q9D1C8 U90926-201ENSMUST00000031356 520 ntAPPRIS ALT2 TSL 5 BASIC4.25□□□□□ -1.73
Vps28Q9D1C8 Tas2r106-201ENSMUST00000076756 927 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
Vps28Q9D1C8 Gm26121-201ENSMUST00000083364 162 ntBASIC4.25□□□□□ -1.73
Vps28Q9D1C8 Mir421-201ENSMUST00000083575 76 ntBASIC4.25□□□□□ -1.73
Vps28Q9D1C8 Nap1l1-202ENSMUST00000171797 3926 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
Vps28Q9D1C8 Nap1l1-204ENSMUST00000218828 3934 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
Vps28Q9D1C8 Pkhd1l1-203ENSMUST00000209244 12949 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
Vps28Q9D1C8 Gm45131-201ENSMUST00000208051 2582 ntBASIC4.25□□□□□ -1.73
Vps28Q9D1C8 Zfp595-201ENSMUST00000109735 3896 ntAPPRIS P2 TSL 1 (best) BASIC4.25□□□□□ -1.73
Vps28Q9D1C8 Hdx-201ENSMUST00000038472 9385 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
Vps28Q9D1C8 Cfh-203ENSMUST00000111977 4100 ntAPPRIS ALT2 TSL 1 (best) BASIC4.25□□□□□ -1.73
Vps28Q9D1C8 Ddi1-201ENSMUST00000051706 7114 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
Vps28Q9D1C8 Oog1-202ENSMUST00000222112 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC4.24□□□□□ -1.73
Vps28Q9D1C8 Olfr187-202ENSMUST00000207673 1322 ntAPPRIS P1 TSL 2 BASIC4.24□□□□□ -1.73
Vps28Q9D1C8 Syne1-205ENSMUST00000215295 27908 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
Vps28Q9D1C8 Olfr919-202ENSMUST00000215612 1992 ntAPPRIS ALT2 TSL 5 BASIC4.24□□□□□ -1.73
Vps28Q9D1C8 Olfr774-202ENSMUST00000203248 1429 ntAPPRIS P1 TSL 3 BASIC4.24□□□□□ -1.73
Vps28Q9D1C8 Olfr111-202ENSMUST00000214259 2620 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
Vps28Q9D1C8 Olfr1183-201ENSMUST00000102618 912 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
Vps28Q9D1C8 Trav12d-2-201ENSMUST00000103593 341 ntAPPRIS ALT2 BASIC4.24□□□□□ -1.73
Vps28Q9D1C8 Trav12n-2-201ENSMUST00000103619 341 ntAPPRIS ALT2 BASIC4.24□□□□□ -1.73
Vps28Q9D1C8 Gm23319-201ENSMUST00000104467 131 ntBASIC4.24□□□□□ -1.73
Vps28Q9D1C8 Gm13664-201ENSMUST00000117304 345 ntBASIC4.24□□□□□ -1.73
Vps28Q9D1C8 Gm8666-201ENSMUST00000117517 292 ntBASIC4.24□□□□□ -1.73
Vps28Q9D1C8 Gm12670-201ENSMUST00000123606 576 ntTSL 2 BASIC4.24□□□□□ -1.73
Vps28Q9D1C8 1700073E17Rik-202ENSMUST00000146858 382 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
Vps28Q9D1C8 Gm13184-201ENSMUST00000149932 626 ntTSL 3 BASIC4.24□□□□□ -1.73
Vps28Q9D1C8 Gm15875-201ENSMUST00000152264 273 ntTSL 3 BASIC4.24□□□□□ -1.73
Vps28Q9D1C8 4930515L19Rik-201ENSMUST00000152352 769 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
Vps28Q9D1C8 4930505K14Rik-201ENSMUST00000155504 515 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
Vps28Q9D1C8 Gm25979-201ENSMUST00000157177 138 ntBASIC4.24□□□□□ -1.73
Vps28Q9D1C8 Gm23312-201ENSMUST00000158774 102 ntBASIC4.24□□□□□ -1.73
Vps28Q9D1C8 Vmn1r18-201ENSMUST00000164732 1087 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
Vps28Q9D1C8 Prl3d2-202ENSMUST00000164964 675 ntAPPRIS ALT2 TSL 1 (best) BASIC4.24□□□□□ -1.73
Vps28Q9D1C8 Vmn1r181-201ENSMUST00000181796 1080 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
Vps28Q9D1C8 2610044O15Rik8-203ENSMUST00000188757 413 ntTSL 2 BASIC4.24□□□□□ -1.73
Vps28Q9D1C8 Gm20812-202ENSMUST00000189550 1230 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
Vps28Q9D1C8 Gm38201-201ENSMUST00000192143 387 ntBASIC4.24□□□□□ -1.73
Vps28Q9D1C8 Gm43569-201ENSMUST00000196200 559 ntTSL 3 BASIC4.24□□□□□ -1.73
Vps28Q9D1C8 Gm42947-201ENSMUST00000198230 675 ntTSL 2 BASIC4.24□□□□□ -1.73
Vps28Q9D1C8 2510017J16Rik-201ENSMUST00000198718 1263 ntBASIC4.24□□□□□ -1.73
Vps28Q9D1C8 Gm44650-201ENSMUST00000206929 194 ntBASIC4.24□□□□□ -1.73
Vps28Q9D1C8 AC093926.1-201ENSMUST00000213730 243 ntBASIC4.24□□□□□ -1.73
Vps28Q9D1C8 Znrd1as-201ENSMUST00000040177 976 ntAPPRIS P2 TSL 1 (best) BASIC4.24□□□□□ -1.73
Vps28Q9D1C8 Olfr873-201ENSMUST00000053919 1062 ntAPPRIS P2 BASIC4.24□□□□□ -1.73
Vps28Q9D1C8 Tas2r124-201ENSMUST00000076150 930 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
Vps28Q9D1C8 Olfr727-201ENSMUST00000079142 1035 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
Vps28Q9D1C8 Gm10811-201ENSMUST00000221985 2448 ntBASIC4.24□□□□□ -1.73
Vps28Q9D1C8 Ktn1-201ENSMUST00000022391 4484 ntAPPRIS P3 TSL 1 (best) BASIC4.24□□□□□ -1.73
Vps28Q9D1C8 Gm42447-201ENSMUST00000200102 2903 ntBASIC4.23□□□□□ -1.73
Vps28Q9D1C8 Vmn1r228-201ENSMUST00000072410 1443 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
Vps28Q9D1C8 Gm12374-201ENSMUST00000147108 3299 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
Vps28Q9D1C8 Rtl4-201ENSMUST00000096301 1758 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
Vps28Q9D1C8 Mir551b-201ENSMUST00000102165 98 ntBASIC4.23□□□□□ -1.73
Vps28Q9D1C8 Gm14401-201ENSMUST00000108968 247 ntTSL 5 BASIC4.23□□□□□ -1.73
Vps28Q9D1C8 Xlr5a-202ENSMUST00000114520 867 ntAPPRIS P1 TSL 3 BASIC4.23□□□□□ -1.73
Vps28Q9D1C8 Gm11432-201ENSMUST00000117334 231 ntBASIC4.23□□□□□ -1.73
Vps28Q9D1C8 Gm14753-201ENSMUST00000118503 246 ntBASIC4.23□□□□□ -1.73
Vps28Q9D1C8 Gm16157-201ENSMUST00000124813 534 ntTSL 3 BASIC4.23□□□□□ -1.73
Vps28Q9D1C8 Gm14618-201ENSMUST00000149377 740 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
Vps28Q9D1C8 Gm23585-201ENSMUST00000157656 102 ntBASIC4.23□□□□□ -1.73
Retrieved 100 of 76,532 protein–RNA pairs in 93.7 ms