Protein–RNA interactions for Protein: Q99MA9

Nkx6-1, Homeobox protein Nkx-6.1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-1Q99MA9 Mir6899-201ENSMUST00000184798 64 ntBASIC5.01□□□□□ -1.61
Nkx6-1Q99MA9 Gm5372-201ENSMUST00000187540 409 ntBASIC5.01□□□□□ -1.61
Nkx6-1Q99MA9 Gm28784-201ENSMUST00000187817 1011 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
Nkx6-1Q99MA9 Gm19641-201ENSMUST00000188432 417 ntBASIC5.01□□□□□ -1.61
Nkx6-1Q99MA9 Gm37485-201ENSMUST00000192326 2953 ntBASIC5.01□□□□□ -1.61
Nkx6-1Q99MA9 Rps27-206ENSMUST00000197361 329 ntTSL 3 BASIC5.01□□□□□ -1.61
Nkx6-1Q99MA9 4930404A12Rik-201ENSMUST00000199356 726 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
Nkx6-1Q99MA9 Gm32772-201ENSMUST00000205898 594 ntTSL 3 BASIC5.01□□□□□ -1.61
Nkx6-1Q99MA9 AC158803.3-201ENSMUST00000220024 211 ntBASIC5.01□□□□□ -1.61
Nkx6-1Q99MA9 Olfr151-202ENSMUST00000221099 929 ntBASIC5.01□□□□□ -1.61
Nkx6-1Q99MA9 AC126554.1-201ENSMUST00000222161 271 ntBASIC5.01□□□□□ -1.61
Nkx6-1Q99MA9 Zmynd11-223ENSMUST00000222358 340 ntTSL 5 BASIC5.01□□□□□ -1.61
Nkx6-1Q99MA9 Trmt2b-201ENSMUST00000087540 822 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
Nkx6-1Q99MA9 Olfr993-201ENSMUST00000099926 945 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
Nkx6-1Q99MA9 Heph-202ENSMUST00000079322 3904 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
Nkx6-1Q99MA9 Tnpo1-202ENSMUST00000109401 8453 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
Nkx6-1Q99MA9 Ncoa7-208ENSMUST00000215926 2875 ntAPPRIS ALT2 TSL 1 (best) BASIC5.01□□□□□ -1.61
Nkx6-1Q99MA9 Gm37880-201ENSMUST00000192216 3257 ntBASIC5.01□□□□□ -1.61
Nkx6-1Q99MA9 Abcb11-201ENSMUST00000102709 5025 ntAPPRIS P2 TSL 5 BASIC5.01□□□□□ -1.61
Nkx6-1Q99MA9 Fat2-201ENSMUST00000068853 14528 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
Nkx6-1Q99MA9 Vmn2r50-201ENSMUST00000074943 2586 ntAPPRIS P2 TSL 5 BASIC5.01□□□□□ -1.61
Nkx6-1Q99MA9 Olfr542-ps1-202ENSMUST00000218525 4039 ntTSL 5 BASIC5□□□□□ -1.61
Nkx6-1Q99MA9 9230109A22Rik-202ENSMUST00000228644 1853 ntBASIC5□□□□□ -1.61
Nkx6-1Q99MA9 Mier1-202ENSMUST00000097945 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC5□□□□□ -1.61
Nkx6-1Q99MA9 Gm42680-201ENSMUST00000196238 2500 ntBASIC5□□□□□ -1.61
Nkx6-1Q99MA9 Smad2-203ENSMUST00000113930 1305 ntTSL 5 BASIC5□□□□□ -1.61
Nkx6-1Q99MA9 Scml2-203ENSMUST00000077375 3550 ntAPPRIS ALT2 TSL 1 (best) BASIC5□□□□□ -1.61
Nkx6-1Q99MA9 Olfr2-206ENSMUST00000216375 5828 ntAPPRIS P1 TSL 3 BASIC5□□□□□ -1.61
Nkx6-1Q99MA9 Fndc3c1-201ENSMUST00000039447 4859 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
Nkx6-1Q99MA9 Rgs2-202ENSMUST00000127206 3021 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
Nkx6-1Q99MA9 Olfr360-202ENSMUST00000216706 1816 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
Nkx6-1Q99MA9 Gm44660-201ENSMUST00000207134 2465 ntBASIC5□□□□□ -1.61
Nkx6-1Q99MA9 Olfr1097-202ENSMUST00000217403 4430 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
Nkx6-1Q99MA9 Gm15095-201ENSMUST00000118996 1430 ntBASIC5□□□□□ -1.61
Nkx6-1Q99MA9 Enpp3-201ENSMUST00000020169 4253 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
Nkx6-1Q99MA9 2610203C20Rik-206ENSMUST00000181814 2996 ntTSL 1 (best) BASIC5□□□□□ -1.61
Nkx6-1Q99MA9 AC147615.2-201ENSMUST00000219876 2154 ntBASIC5□□□□□ -1.61
Nkx6-1Q99MA9 Gm11110-201ENSMUST00000112915 1013 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
Nkx6-1Q99MA9 Gm13085-201ENSMUST00000118356 171 ntBASIC5□□□□□ -1.61
Nkx6-1Q99MA9 Gm13228-201ENSMUST00000118937 634 ntBASIC5□□□□□ -1.61
Nkx6-1Q99MA9 Gm9043-201ENSMUST00000119677 314 ntBASIC5□□□□□ -1.61
Nkx6-1Q99MA9 Gm7363-201ENSMUST00000119883 399 ntBASIC5□□□□□ -1.61
Nkx6-1Q99MA9 Gm13239-201ENSMUST00000119920 637 ntBASIC5□□□□□ -1.61
Nkx6-1Q99MA9 Gm14852-201ENSMUST00000120065 647 ntBASIC5□□□□□ -1.61
Nkx6-1Q99MA9 Mup-ps18-201ENSMUST00000120145 531 ntBASIC5□□□□□ -1.61
Nkx6-1Q99MA9 Gm12237-201ENSMUST00000120158 470 ntBASIC5□□□□□ -1.61
Nkx6-1Q99MA9 Gm17014-201ENSMUST00000120765 168 ntBASIC5□□□□□ -1.61
Nkx6-1Q99MA9 Gm15521-201ENSMUST00000141752 835 ntTSL 2 BASIC5□□□□□ -1.61
Nkx6-1Q99MA9 Gm22084-201ENSMUST00000157585 105 ntBASIC5□□□□□ -1.61
Nkx6-1Q99MA9 Gm25427-201ENSMUST00000157605 103 ntBASIC5□□□□□ -1.61
Nkx6-1Q99MA9 Gm15647-201ENSMUST00000160178 691 ntTSL 3 BASIC5□□□□□ -1.61
Nkx6-1Q99MA9 Gm17430-201ENSMUST00000171339 474 ntAPPRIS P1 BASIC5□□□□□ -1.61
Nkx6-1Q99MA9 Vmn2r-ps18-201ENSMUST00000177972 380 ntBASIC5□□□□□ -1.61
Nkx6-1Q99MA9 Gm21978-201ENSMUST00000179696 377 ntBASIC5□□□□□ -1.61
Nkx6-1Q99MA9 Ranbp2-ps6-201ENSMUST00000183722 381 ntBASIC5□□□□□ -1.61
Nkx6-1Q99MA9 Gm27202-201ENSMUST00000183838 512 ntTSL 5 BASIC5□□□□□ -1.61
Nkx6-1Q99MA9 Mir6363-201ENSMUST00000184880 114 ntBASIC5□□□□□ -1.61
Nkx6-1Q99MA9 Gm29031-201ENSMUST00000185316 614 ntBASIC5□□□□□ -1.61
Nkx6-1Q99MA9 Gm29000-201ENSMUST00000185444 614 ntBASIC5□□□□□ -1.61
Nkx6-1Q99MA9 Gm29504-201ENSMUST00000185605 537 ntTSL 5 BASIC5□□□□□ -1.61
Nkx6-1Q99MA9 Gm28781-201ENSMUST00000185760 696 ntBASIC5□□□□□ -1.61
Nkx6-1Q99MA9 Gm28204-201ENSMUST00000185934 614 ntBASIC5□□□□□ -1.61
Nkx6-1Q99MA9 Gm28290-201ENSMUST00000186505 614 ntBASIC5□□□□□ -1.61
Nkx6-1Q99MA9 Gm28565-202ENSMUST00000186615 537 ntTSL 5 BASIC5□□□□□ -1.61
Nkx6-1Q99MA9 Gm28161-201ENSMUST00000186669 614 ntBASIC5□□□□□ -1.61
Nkx6-1Q99MA9 Gm28297-201ENSMUST00000186679 537 ntTSL 5 BASIC5□□□□□ -1.61
Nkx6-1Q99MA9 Gm29093-201ENSMUST00000187366 409 ntTSL 5 BASIC5□□□□□ -1.61
Nkx6-1Q99MA9 Gm29307-201ENSMUST00000187367 696 ntBASIC5□□□□□ -1.61
Nkx6-1Q99MA9 Gm29578-201ENSMUST00000188809 537 ntTSL 5 BASIC5□□□□□ -1.61
Nkx6-1Q99MA9 Gm28749-209ENSMUST00000189599 614 ntBASIC5□□□□□ -1.61
Nkx6-1Q99MA9 Gm29166-202ENSMUST00000189600 537 ntTSL 5 BASIC5□□□□□ -1.61
Nkx6-1Q99MA9 Gm29339-201ENSMUST00000189613 696 ntBASIC5□□□□□ -1.61
Nkx6-1Q99MA9 Gm28765-201ENSMUST00000189752 537 ntTSL 5 BASIC5□□□□□ -1.61
Nkx6-1Q99MA9 Gm28522-202ENSMUST00000190561 537 ntTSL 5 BASIC5□□□□□ -1.61
Nkx6-1Q99MA9 Gm29407-201ENSMUST00000191468 696 ntBASIC5□□□□□ -1.61
Nkx6-1Q99MA9 Gm33163-201ENSMUST00000194504 614 ntBASIC5□□□□□ -1.61
Nkx6-1Q99MA9 Gm38167-201ENSMUST00000195704 1178 ntBASIC5□□□□□ -1.61
Nkx6-1Q99MA9 Gm43500-201ENSMUST00000201067 312 ntTSL 5 BASIC5□□□□□ -1.61
Nkx6-1Q99MA9 Gm44012-201ENSMUST00000204154 424 ntTSL 3 BASIC5□□□□□ -1.61
Nkx6-1Q99MA9 Olfr1108-ps1-201ENSMUST00000216930 121 ntBASIC5□□□□□ -1.61
Nkx6-1Q99MA9 Gm8158-201ENSMUST00000219220 465 ntBASIC5□□□□□ -1.61
Nkx6-1Q99MA9 Gm8249-201ENSMUST00000219225 465 ntBASIC5□□□□□ -1.61
Nkx6-1Q99MA9 Gm8112-201ENSMUST00000219637 465 ntBASIC5□□□□□ -1.61
Nkx6-1Q99MA9 9430078K24Rik-202ENSMUST00000219857 348 ntTSL 3 BASIC5□□□□□ -1.61
Nkx6-1Q99MA9 AC153794.2-201ENSMUST00000222650 550 ntBASIC5□□□□□ -1.61
Nkx6-1Q99MA9 AC165366.1-201ENSMUST00000225905 505 ntAPPRIS P1 BASIC5□□□□□ -1.61
Nkx6-1Q99MA9 CT025548.1-201ENSMUST00000227459 257 ntBASIC5□□□□□ -1.61
Nkx6-1Q99MA9 AC100733.1-201ENSMUST00000228494 407 ntBASIC5□□□□□ -1.61
Nkx6-1Q99MA9 Gm25141-201ENSMUST00000083177 107 ntBASIC5□□□□□ -1.61
Nkx6-1Q99MA9 Vps41-201ENSMUST00000072961 3199 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
Nkx6-1Q99MA9 Galnt1-208ENSMUST00000178605 3796 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
Nkx6-1Q99MA9 Olfr1443-201ENSMUST00000049724 4343 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
Nkx6-1Q99MA9 Zfp950-207ENSMUST00000180544 2568 ntAPPRIS P1 TSL 3 BASIC5□□□□□ -1.61
Nkx6-1Q99MA9 Lair1-201ENSMUST00000068865 6828 ntTSL 1 (best) BASIC5□□□□□ -1.61
Nkx6-1Q99MA9 Olfr1262-202ENSMUST00000111508 6068 ntAPPRIS P1 TSL 2 BASIC5□□□□□ -1.61
Nkx6-1Q99MA9 Gm37195-201ENSMUST00000192006 3018 ntBASIC4.99□□□□□ -1.61
Nkx6-1Q99MA9 Gm44789-201ENSMUST00000207195 3101 ntBASIC4.99□□□□□ -1.61
Nkx6-1Q99MA9 AC152414.1-201ENSMUST00000218784 2287 ntTSL 5 BASIC4.99□□□□□ -1.61
Nkx6-1Q99MA9 4933434E20Rik-201ENSMUST00000029551 3097 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
Nkx6-1Q99MA9 Olfr944-203ENSMUST00000215306 1523 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
Retrieved 100 of 76,532 protein–RNA pairs in 77.4 ms