Protein–RNA interactions for Protein: Q8C6K9

Col6a6, Collagen alpha-6(VI) chain, mousemouse

Predictions only

Length 2,265 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6Q8C6K9 Mir7682-201ENSMUST00000198467 58 ntBASIC2.8□□□□□ -1.96
Col6a6Q8C6K9 Igkv14-134-1-201ENSMUST00000199111 331 ntBASIC2.8□□□□□ -1.96
Col6a6Q8C6K9 Mir9-1-201ENSMUST00000199907 89 ntBASIC2.8□□□□□ -1.96
Col6a6Q8C6K9 Gm28563-201ENSMUST00000201179 211 ntTSL 3 BASIC2.8□□□□□ -1.96
Col6a6Q8C6K9 Gm43992-201ENSMUST00000204358 197 ntBASIC2.8□□□□□ -1.96
Col6a6Q8C6K9 Gm8319-201ENSMUST00000205708 641 ntBASIC2.8□□□□□ -1.96
Col6a6Q8C6K9 Gm7198-201ENSMUST00000219635 1074 ntBASIC2.8□□□□□ -1.96
Col6a6Q8C6K9 Gm5176-202ENSMUST00000220267 583 ntBASIC2.8□□□□□ -1.96
Col6a6Q8C6K9 AC166113.1-201ENSMUST00000225258 475 ntBASIC2.8□□□□□ -1.96
Col6a6Q8C6K9 4930568D16Rik-201ENSMUST00000028243 1227 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
Col6a6Q8C6K9 Olfr143-201ENSMUST00000093865 942 ntAPPRIS P2 BASIC2.8□□□□□ -1.96
Col6a6Q8C6K9 Smcp-201ENSMUST00000098888 861 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
Col6a6Q8C6K9 Scn7a-201ENSMUST00000042792 7338 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
Col6a6Q8C6K9 Olfr1224-ps1-206ENSMUST00000216976 2019 ntAPPRIS P1 TSL 3 BASIC2.79□□□□□ -1.96
Col6a6Q8C6K9 AC160931.3-201ENSMUST00000222111 2267 ntBASIC2.79□□□□□ -1.96
Col6a6Q8C6K9 B3galt2-201ENSMUST00000038252 9288 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
Col6a6Q8C6K9 Olfr483-201ENSMUST00000104917 1065 ntAPPRIS P1 BASIC2.79□□□□□ -1.96
Col6a6Q8C6K9 Gm15377-201ENSMUST00000119594 246 ntBASIC2.79□□□□□ -1.96
Col6a6Q8C6K9 Gm12617-201ENSMUST00000121268 381 ntBASIC2.79□□□□□ -1.96
Col6a6Q8C6K9 Mir5118-201ENSMUST00000175551 67 ntBASIC2.79□□□□□ -1.96
Col6a6Q8C6K9 Vmn1r-ps151-201ENSMUST00000176956 982 ntBASIC2.79□□□□□ -1.96
Col6a6Q8C6K9 Zfp-ps-201ENSMUST00000185025 478 ntBASIC2.79□□□□□ -1.96
Col6a6Q8C6K9 AC166323.1-201ENSMUST00000217756 367 ntBASIC2.79□□□□□ -1.96
Col6a6Q8C6K9 AC153361.1-201ENSMUST00000219679 247 ntBASIC2.79□□□□□ -1.96
Col6a6Q8C6K9 Gm22970-201ENSMUST00000083304 186 ntBASIC2.79□□□□□ -1.96
Col6a6Q8C6K9 Ak6-202ENSMUST00000084721 1222 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
Col6a6Q8C6K9 Gm37124-201ENSMUST00000192140 1992 ntBASIC2.79□□□□□ -1.96
Col6a6Q8C6K9 Olfr1263-204ENSMUST00000217065 4186 ntAPPRIS P1 TSL 5 BASIC2.79□□□□□ -1.96
Col6a6Q8C6K9 Olfr1379-ps1-201ENSMUST00000120726 1001 ntBASIC2.79□□□□□ -1.96
Col6a6Q8C6K9 Gm14065-201ENSMUST00000120848 585 ntBASIC2.79□□□□□ -1.96
Col6a6Q8C6K9 Gm15870-201ENSMUST00000132657 644 ntTSL 3 BASIC2.79□□□□□ -1.96
Col6a6Q8C6K9 Gm43439-201ENSMUST00000138710 322 ntTSL 3 BASIC2.79□□□□□ -1.96
Col6a6Q8C6K9 Gm17191-201ENSMUST00000165200 417 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
Col6a6Q8C6K9 Mir5127-201ENSMUST00000175295 71 ntBASIC2.79□□□□□ -1.96
Col6a6Q8C6K9 Gm24369-201ENSMUST00000175387 96 ntBASIC2.79□□□□□ -1.96
Col6a6Q8C6K9 Gm21112-201ENSMUST00000212224 578 ntBASIC2.79□□□□□ -1.96
Col6a6Q8C6K9 Gm7760-201ENSMUST00000212265 578 ntBASIC2.79□□□□□ -1.96
Col6a6Q8C6K9 Gm40646-201ENSMUST00000218243 490 ntTSL 5 BASIC2.79□□□□□ -1.96
Col6a6Q8C6K9 Gm19181-201ENSMUST00000218891 940 ntBASIC2.79□□□□□ -1.96
Col6a6Q8C6K9 AC139376.1-201ENSMUST00000220056 1250 ntBASIC2.79□□□□□ -1.96
Col6a6Q8C6K9 AC122924.1-201ENSMUST00000222044 163 ntBASIC2.79□□□□□ -1.96
Col6a6Q8C6K9 Scgb1b2-201ENSMUST00000080635 424 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
Col6a6Q8C6K9 Fam111a-204ENSMUST00000151307 3687 ntAPPRIS ALT2 TSL 5 BASIC2.78□□□□□ -1.96
Col6a6Q8C6K9 Olfr124-203ENSMUST00000216478 4416 ntAPPRIS P1 TSL 5 BASIC2.78□□□□□ -1.96
Col6a6Q8C6K9 Gm37970-201ENSMUST00000193865 1732 ntBASIC2.78□□□□□ -1.96
Col6a6Q8C6K9 Olfr715b-202ENSMUST00000215713 3879 ntAPPRIS P1 TSL 5 BASIC2.78□□□□□ -1.96
Col6a6Q8C6K9 Postn-203ENSMUST00000107985 3205 ntAPPRIS ALT2 TSL 1 (best) BASIC2.78□□□□□ -1.96
Col6a6Q8C6K9 S100a5-201ENSMUST00000001049 422 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
Col6a6Q8C6K9 Gm14570-201ENSMUST00000119444 391 ntBASIC2.78□□□□□ -1.96
Col6a6Q8C6K9 Olfr1298-201ENSMUST00000119566 939 ntAPPRIS P1 BASIC2.78□□□□□ -1.96
Col6a6Q8C6K9 Mup-ps13-201ENSMUST00000120662 545 ntBASIC2.78□□□□□ -1.96
Col6a6Q8C6K9 n-R5s32-201ENSMUST00000122495 103 ntBASIC2.78□□□□□ -1.96
Col6a6Q8C6K9 Gm15218-201ENSMUST00000131006 618 ntTSL 5 BASIC2.78□□□□□ -1.96
Col6a6Q8C6K9 Gm15397-201ENSMUST00000145790 804 ntTSL 3 BASIC2.78□□□□□ -1.96
Col6a6Q8C6K9 1700123O12Rik-203ENSMUST00000145856 425 ntTSL 5 BASIC2.78□□□□□ -1.96
Col6a6Q8C6K9 Gm16311-201ENSMUST00000161939 702 ntTSL 3 BASIC2.78□□□□□ -1.96
Col6a6Q8C6K9 Gm27445-201ENSMUST00000184484 72 ntBASIC2.78□□□□□ -1.96
Col6a6Q8C6K9 5033403H07Rik-203ENSMUST00000198580 467 ntTSL 2 BASIC2.78□□□□□ -1.96
Col6a6Q8C6K9 Gm43596-201ENSMUST00000202818 884 ntBASIC2.78□□□□□ -1.96
Col6a6Q8C6K9 AC160958.1-201ENSMUST00000224833 368 ntBASIC2.78□□□□□ -1.96
Col6a6Q8C6K9 Gm22155-201ENSMUST00000083836 162 ntBASIC2.78□□□□□ -1.96
Col6a6Q8C6K9 Olfr625-ps1-201ENSMUST00000098195 966 ntAPPRIS P5 BASIC2.78□□□□□ -1.96
Col6a6Q8C6K9 Olfr1033-205ENSMUST00000218397 3973 ntAPPRIS P1 TSL 5 BASIC2.78□□□□□ -1.96
Col6a6Q8C6K9 Gm36529-201ENSMUST00000222495 1529 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
Col6a6Q8C6K9 Olfr220-202ENSMUST00000194229 3286 ntAPPRIS P1 TSL 3 BASIC2.78□□□□□ -1.96
Col6a6Q8C6K9 Ppef1-201ENSMUST00000071204 2483 ntAPPRIS P1 TSL 2 BASIC2.78□□□□□ -1.96
Col6a6Q8C6K9 Gm36927-201ENSMUST00000192504 1841 ntBASIC2.78□□□□□ -1.97
Col6a6Q8C6K9 Gm38010-201ENSMUST00000192592 2784 ntBASIC2.78□□□□□ -1.97
Col6a6Q8C6K9 Fam46d-204ENSMUST00000167154 3004 ntAPPRIS P1 TSL 3 BASIC2.78□□□□□ -1.97
Col6a6Q8C6K9 Gm36298-201ENSMUST00000223394 1732 ntBASIC2.78□□□□□ -1.97
Col6a6Q8C6K9 Trav10n-201ENSMUST00000103612 343 ntAPPRIS P1 BASIC2.77□□□□□ -1.97
Col6a6Q8C6K9 Gm15361-201ENSMUST00000119320 444 ntBASIC2.77□□□□□ -1.97
Col6a6Q8C6K9 Gm11321-201ENSMUST00000121257 902 ntBASIC2.77□□□□□ -1.97
Col6a6Q8C6K9 Gm28828-201ENSMUST00000186601 696 ntBASIC2.77□□□□□ -1.97
Col6a6Q8C6K9 Gm28641-201ENSMUST00000187783 335 ntTSL 5 BASIC2.77□□□□□ -1.97
Col6a6Q8C6K9 Gm19694-201ENSMUST00000192364 505 ntBASIC2.77□□□□□ -1.97
Col6a6Q8C6K9 Gm17967-201ENSMUST00000195319 647 ntBASIC2.77□□□□□ -1.97
Col6a6Q8C6K9 2900042G08Rik-201ENSMUST00000221776 650 ntBASIC2.77□□□□□ -1.97
Col6a6Q8C6K9 AC167669.3-201ENSMUST00000224720 393 ntBASIC2.77□□□□□ -1.97
Col6a6Q8C6K9 4930524N10Rik-201ENSMUST00000082357 919 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
Col6a6Q8C6K9 Gm13972-201ENSMUST00000153726 3164 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
Col6a6Q8C6K9 A230057D06Rik-202ENSMUST00000207061 3717 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
Col6a6Q8C6K9 Vmn1r49-203ENSMUST00000226368 6276 ntAPPRIS P1 BASIC2.77□□□□□ -1.97
Col6a6Q8C6K9 Gm38269-201ENSMUST00000194549 3298 ntBASIC2.77□□□□□ -1.97
Col6a6Q8C6K9 4930597A21Rik-201ENSMUST00000128652 698 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
Col6a6Q8C6K9 Gm6969-201ENSMUST00000140065 342 ntBASIC2.77□□□□□ -1.97
Col6a6Q8C6K9 Snord92-201ENSMUST00000175548 85 ntBASIC2.77□□□□□ -1.97
Col6a6Q8C6K9 Cldn34b4-202ENSMUST00000178974 881 ntAPPRIS P1 TSL 5 BASIC2.77□□□□□ -1.97
Col6a6Q8C6K9 4930532M18Rik-201ENSMUST00000187189 481 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
Col6a6Q8C6K9 Ms4a2-205ENSMUST00000189641 647 ntTSL 3 BASIC2.77□□□□□ -1.97
Col6a6Q8C6K9 Gm8747-201ENSMUST00000195392 751 ntBASIC2.77□□□□□ -1.97
Col6a6Q8C6K9 AC174457.1-201ENSMUST00000215932 226 ntBASIC2.77□□□□□ -1.97
Col6a6Q8C6K9 AC122937.1-201ENSMUST00000226405 793 ntBASIC2.77□□□□□ -1.97
Col6a6Q8C6K9 Gm22979-201ENSMUST00000082609 159 ntBASIC2.77□□□□□ -1.97
Col6a6Q8C6K9 Olfr1037-201ENSMUST00000099911 1125 ntAPPRIS P1 BASIC2.77□□□□□ -1.97
Col6a6Q8C6K9 Btbd35f5-201ENSMUST00000179538 1950 ntAPPRIS P1 BASIC2.77□□□□□ -1.97
Col6a6Q8C6K9 4932431L22Rik-201ENSMUST00000193456 3140 ntBASIC2.77□□□□□ -1.97
Col6a6Q8C6K9 Gpr82-201ENSMUST00000053659 2497 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
Col6a6Q8C6K9 Gm28240-201ENSMUST00000187560 2053 ntBASIC2.77□□□□□ -1.97
Col6a6Q8C6K9 Olfr748-202ENSMUST00000213101 3632 ntAPPRIS P1 TSL 5 BASIC2.76□□□□□ -1.97
Retrieved 100 of 76,532 protein–RNA pairs in 82.6 ms