Protein–RNA interactions for Protein: Q78JW9

Ubfd1, Ubiquitin domain-containing protein UBFD1, mousemouse

Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubfd1Q78JW9 Vmn2r-ps40-201ENSMUST00000174438 2558 ntBASIC4.4□□□□□ -1.7
Ubfd1Q78JW9 Gm5117-201ENSMUST00000178878 2553 ntBASIC4.4□□□□□ -1.7
Ubfd1Q78JW9 Gm25876-201ENSMUST00000104329 119 ntBASIC4.4□□□□□ -1.71
Ubfd1Q78JW9 Vmn1r3-201ENSMUST00000105159 1011 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
Ubfd1Q78JW9 Gm15148-201ENSMUST00000117602 156 ntBASIC4.4□□□□□ -1.71
Ubfd1Q78JW9 Gm15058-201ENSMUST00000117689 458 ntBASIC4.4□□□□□ -1.71
Ubfd1Q78JW9 Gm15603-201ENSMUST00000119252 492 ntBASIC4.4□□□□□ -1.71
Ubfd1Q78JW9 Gm14128-201ENSMUST00000119514 1011 ntBASIC4.4□□□□□ -1.71
Ubfd1Q78JW9 Gm13627-201ENSMUST00000119700 706 ntBASIC4.4□□□□□ -1.71
Ubfd1Q78JW9 Gm2005-201ENSMUST00000120759 542 ntBASIC4.4□□□□□ -1.71
Ubfd1Q78JW9 Gm5391-201ENSMUST00000121155 613 ntBASIC4.4□□□□□ -1.71
Ubfd1Q78JW9 Gm11438-201ENSMUST00000121582 189 ntBASIC4.4□□□□□ -1.71
Ubfd1Q78JW9 Gm12770-201ENSMUST00000121734 462 ntBASIC4.4□□□□□ -1.71
Ubfd1Q78JW9 1700123O12Rik-203ENSMUST00000145856 425 ntTSL 5 BASIC4.4□□□□□ -1.71
Ubfd1Q78JW9 Gm23496-201ENSMUST00000157741 248 ntBASIC4.4□□□□□ -1.71
Ubfd1Q78JW9 Gm14527-201ENSMUST00000179300 639 ntBASIC4.4□□□□□ -1.71
Ubfd1Q78JW9 Gm27233-201ENSMUST00000184030 307 ntBASIC4.4□□□□□ -1.71
Ubfd1Q78JW9 Gtpbp4-ps5-201ENSMUST00000184969 289 ntBASIC4.4□□□□□ -1.71
Ubfd1Q78JW9 Gm18185-201ENSMUST00000186725 667 ntBASIC4.4□□□□□ -1.71
Ubfd1Q78JW9 1700044K03Rik-201ENSMUST00000190201 377 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
Ubfd1Q78JW9 Gm43468-201ENSMUST00000199769 397 ntTSL 3 BASIC4.4□□□□□ -1.71
Ubfd1Q78JW9 Gm44611-201ENSMUST00000207507 355 ntBASIC4.4□□□□□ -1.71
Ubfd1Q78JW9 Gm18602-201ENSMUST00000209794 851 ntBASIC4.4□□□□□ -1.71
Ubfd1Q78JW9 Olfr580-ps1-201ENSMUST00000210528 943 ntBASIC4.4□□□□□ -1.71
Ubfd1Q78JW9 Gm45341-201ENSMUST00000210850 1104 ntTSL 5 BASIC4.4□□□□□ -1.71
Ubfd1Q78JW9 Gm40646-201ENSMUST00000218243 490 ntTSL 5 BASIC4.4□□□□□ -1.71
Ubfd1Q78JW9 CT010455.1-201ENSMUST00000218579 413 ntBASIC4.4□□□□□ -1.71
Ubfd1Q78JW9 AC091764.3-201ENSMUST00000219646 300 ntTSL 5 BASIC4.4□□□□□ -1.71
Ubfd1Q78JW9 Gm46190-201ENSMUST00000219650 427 ntBASIC4.4□□□□□ -1.71
Ubfd1Q78JW9 AC125531.1-201ENSMUST00000219849 221 ntBASIC4.4□□□□□ -1.71
Ubfd1Q78JW9 AC123062.1-201ENSMUST00000221287 481 ntBASIC4.4□□□□□ -1.71
Ubfd1Q78JW9 Gm18026-201ENSMUST00000222789 727 ntBASIC4.4□□□□□ -1.71
Ubfd1Q78JW9 4930469K13Rik-203ENSMUST00000224226 243 ntAPPRIS ALT2 BASIC4.4□□□□□ -1.71
Ubfd1Q78JW9 Fam183b-201ENSMUST00000060581 493 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
Ubfd1Q78JW9 Olfr782-201ENSMUST00000077024 945 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
Ubfd1Q78JW9 Gm22155-201ENSMUST00000083836 162 ntBASIC4.4□□□□□ -1.71
Ubfd1Q78JW9 Olfr1297-201ENSMUST00000099612 939 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
Ubfd1Q78JW9 Cacnb4-202ENSMUST00000102760 7872 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
Ubfd1Q78JW9 AC158605.2-201ENSMUST00000220287 2726 ntAPPRIS P1 TSL 2 BASIC4.4□□□□□ -1.71
Ubfd1Q78JW9 Kcnt2-201ENSMUST00000119786 3624 ntTSL 5 BASIC4.4□□□□□ -1.71
Ubfd1Q78JW9 Gm45223-201ENSMUST00000207037 5138 ntBASIC4.4□□□□□ -1.71
Ubfd1Q78JW9 Rnf128-202ENSMUST00000113027 2641 ntTSL 5 BASIC4.4□□□□□ -1.71
Ubfd1Q78JW9 Gm42551-201ENSMUST00000197701 1573 ntBASIC4.4□□□□□ -1.71
Ubfd1Q78JW9 Phf11c-201ENSMUST00000166912 3459 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
Ubfd1Q78JW9 Clhc1-201ENSMUST00000020753 2200 ntAPPRIS P3 TSL 1 (best) BASIC4.4□□□□□ -1.71
Ubfd1Q78JW9 Adam24-201ENSMUST00000051614 2887 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
Ubfd1Q78JW9 Olfr1037-202ENSMUST00000213333 1610 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
Ubfd1Q78JW9 Pcsk2os2-201ENSMUST00000153878 3370 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
Ubfd1Q78JW9 Vmn2r-ps11-201ENSMUST00000176568 2730 ntBASIC4.39□□□□□ -1.71
Ubfd1Q78JW9 Prkdc-201ENSMUST00000023352 12647 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
Ubfd1Q78JW9 Cd86-201ENSMUST00000089620 2539 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
Ubfd1Q78JW9 Gpr141-201ENSMUST00000065335 3433 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
Ubfd1Q78JW9 Klhl13-204ENSMUST00000115317 3216 ntAPPRIS ALT1 TSL 5 BASIC4.39□□□□□ -1.71
Ubfd1Q78JW9 Gm609-201ENSMUST00000114585 2122 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
Ubfd1Q78JW9 Gm43010-201ENSMUST00000195993 2878 ntBASIC4.39□□□□□ -1.71
Ubfd1Q78JW9 Mir761-201ENSMUST00000103245 76 ntBASIC4.39□□□□□ -1.71
Ubfd1Q78JW9 Gm14385-201ENSMUST00000116315 876 ntBASIC4.39□□□□□ -1.71
Ubfd1Q78JW9 Gm15195-201ENSMUST00000118775 263 ntBASIC4.39□□□□□ -1.71
Ubfd1Q78JW9 Gm12719-201ENSMUST00000118859 241 ntBASIC4.39□□□□□ -1.71
Ubfd1Q78JW9 Gm12884-201ENSMUST00000120371 325 ntBASIC4.39□□□□□ -1.71
Ubfd1Q78JW9 Sult2a-ps2-201ENSMUST00000121135 405 ntBASIC4.39□□□□□ -1.71
Ubfd1Q78JW9 Gm11321-201ENSMUST00000121257 902 ntBASIC4.39□□□□□ -1.71
Ubfd1Q78JW9 Gm13232-201ENSMUST00000121816 632 ntBASIC4.39□□□□□ -1.71
Ubfd1Q78JW9 Olfr1003-ps1-201ENSMUST00000122238 717 ntBASIC4.39□□□□□ -1.71
Ubfd1Q78JW9 Gm15735-201ENSMUST00000136187 514 ntTSL 3 BASIC4.39□□□□□ -1.71
Ubfd1Q78JW9 Gm12724-201ENSMUST00000140196 665 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
Ubfd1Q78JW9 Gm13348-201ENSMUST00000147324 690 ntTSL 5 BASIC4.39□□□□□ -1.71
Ubfd1Q78JW9 Gm12914-201ENSMUST00000148635 305 ntTSL 5 BASIC4.39□□□□□ -1.71
Ubfd1Q78JW9 Gm15767-202ENSMUST00000153786 544 ntTSL 3 BASIC4.39□□□□□ -1.71
Ubfd1Q78JW9 Gm24690-201ENSMUST00000157759 97 ntBASIC4.39□□□□□ -1.71
Ubfd1Q78JW9 Gm20415-201ENSMUST00000172877 423 ntBASIC4.39□□□□□ -1.71
Ubfd1Q78JW9 Mir3058-201ENSMUST00000175126 91 ntBASIC4.39□□□□□ -1.71
Ubfd1Q78JW9 Mir3112-201ENSMUST00000175431 82 ntBASIC4.39□□□□□ -1.71
Ubfd1Q78JW9 Gm22395-201ENSMUST00000177427 96 ntBASIC4.39□□□□□ -1.71
Ubfd1Q78JW9 Gm10715-202ENSMUST00000177969 681 ntAPPRIS P5 TSL 5 BASIC4.39□□□□□ -1.71
Ubfd1Q78JW9 Gm26824-201ENSMUST00000180506 1164 ntTSL 5 BASIC4.39□□□□□ -1.71
Ubfd1Q78JW9 Gm26652-202ENSMUST00000181672 475 ntBASIC4.39□□□□□ -1.71
Ubfd1Q78JW9 Gm26962-201ENSMUST00000182545 265 ntTSL 3 BASIC4.39□□□□□ -1.71
Ubfd1Q78JW9 Mir7074-201ENSMUST00000183884 63 ntBASIC4.39□□□□□ -1.71
Ubfd1Q78JW9 Gm5731-201ENSMUST00000190969 481 ntBASIC4.39□□□□□ -1.71
Ubfd1Q78JW9 Gm43494-201ENSMUST00000197672 388 ntBASIC4.39□□□□□ -1.71
Ubfd1Q78JW9 Gm43015-201ENSMUST00000199087 565 ntBASIC4.39□□□□□ -1.71
Ubfd1Q78JW9 Gm4734-201ENSMUST00000200117 777 ntBASIC4.39□□□□□ -1.71
Ubfd1Q78JW9 Gm43151-201ENSMUST00000201093 657 ntTSL 3 BASIC4.39□□□□□ -1.71
Ubfd1Q78JW9 Gm45715-201ENSMUST00000206991 434 ntTSL 3 BASIC4.39□□□□□ -1.71
Ubfd1Q78JW9 Gm45086-201ENSMUST00000209052 462 ntTSL 5 BASIC4.39□□□□□ -1.71
Ubfd1Q78JW9 Olfr581-ps1-201ENSMUST00000209214 556 ntBASIC4.39□□□□□ -1.71
Ubfd1Q78JW9 AC157654.1-201ENSMUST00000224130 820 ntBASIC4.39□□□□□ -1.71
Ubfd1Q78JW9 AC154576.1-201ENSMUST00000225864 563 ntBASIC4.39□□□□□ -1.71
Ubfd1Q78JW9 AC133101.1-201ENSMUST00000226939 1199 ntBASIC4.39□□□□□ -1.71
Ubfd1Q78JW9 CT030662.2-201ENSMUST00000226942 805 ntBASIC4.39□□□□□ -1.71
Ubfd1Q78JW9 AC154618.1-201ENSMUST00000227451 303 ntBASIC4.39□□□□□ -1.71
Ubfd1Q78JW9 Fabp9-201ENSMUST00000029038 583 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
Ubfd1Q78JW9 Olfr917-201ENSMUST00000076542 930 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
Ubfd1Q78JW9 Tas2r114-201ENSMUST00000080619 930 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
Ubfd1Q78JW9 Gm23099-201ENSMUST00000083454 139 ntBASIC4.39□□□□□ -1.71
Ubfd1Q78JW9 Clca4c-ps-201ENSMUST00000098551 712 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
Ubfd1Q78JW9 Olfr1164-201ENSMUST00000099834 1112 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
Ubfd1Q78JW9 Olfr987-201ENSMUST00000099929 1075 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
Ubfd1Q78JW9 4930528J11Rik-201ENSMUST00000201689 3611 ntBASIC4.39□□□□□ -1.71
Retrieved 100 of 76,532 protein–RNA pairs in 66.1 ms