Protein–RNA interactions for Protein: Q04887

Sox9, Transcription factor SOX-9, mousemouse

Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox9Q04887 Gm23423-201ENSMUST00000082782 106 ntBASIC5.08□□□□□ -1.6
Sox9Q04887 Gm23378-201ENSMUST00000082942 107 ntBASIC5.08□□□□□ -1.6
Sox9Q04887 Gm24043-201ENSMUST00000083108 116 ntBASIC5.08□□□□□ -1.6
Sox9Q04887 Gm24446-201ENSMUST00000083982 156 ntBASIC5.08□□□□□ -1.6
Sox9Q04887 Olfr583-201ENSMUST00000098211 960 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
Sox9Q04887 Defb26-201ENSMUST00000099205 561 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
Sox9Q04887 Ints12-201ENSMUST00000029650 3101 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
Sox9Q04887 Gm31747-201ENSMUST00000204638 3086 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
Sox9Q04887 Slc10a2-201ENSMUST00000023835 4152 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
Sox9Q04887 Taok1-201ENSMUST00000017435 11813 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
Sox9Q04887 Ktn1-216ENSMUST00000189533 3941 ntAPPRIS ALT2 TSL 5 BASIC5.08□□□□□ -1.6
Sox9Q04887 Psmc6-201ENSMUST00000022380 2234 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
Sox9Q04887 Gm37900-201ENSMUST00000195510 3805 ntBASIC5.08□□□□□ -1.6
Sox9Q04887 Erbin-204ENSMUST00000169083 5435 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
Sox9Q04887 Zfp955a-201ENSMUST00000008830 1638 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
Sox9Q04887 Olfr584-202ENSMUST00000214215 3152 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
Sox9Q04887 Gm44625-201ENSMUST00000207838 1561 ntBASIC5.08□□□□□ -1.6
Sox9Q04887 Cfap97-201ENSMUST00000034048 4619 ntAPPRIS P2 TSL 1 (best) BASIC5.08□□□□□ -1.6
Sox9Q04887 Fbxl13-201ENSMUST00000051358 2531 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
Sox9Q04887 Olfr705-202ENSMUST00000213721 3001 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
Sox9Q04887 Gm45352-201ENSMUST00000210140 1452 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Sox9Q04887 Ugt2b35-201ENSMUST00000031186 3359 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
Sox9Q04887 Olfr1427-202ENSMUST00000215374 3342 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
Sox9Q04887 Olfr1200-202ENSMUST00000217588 4996 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
Sox9Q04887 Clhc1-201ENSMUST00000020753 2200 ntAPPRIS P3 TSL 1 (best) BASIC5.07□□□□□ -1.6
Sox9Q04887 Akr1e1-201ENSMUST00000091848 3463 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
Sox9Q04887 Muc15-202ENSMUST00000111016 3421 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
Sox9Q04887 Igkv5-48-201ENSMUST00000103364 360 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
Sox9Q04887 Gm24124-201ENSMUST00000104103 132 ntBASIC5.07□□□□□ -1.6
Sox9Q04887 Gm14125-201ENSMUST00000113442 680 ntBASIC5.07□□□□□ -1.6
Sox9Q04887 Gm25315-201ENSMUST00000116823 121 ntBASIC5.07□□□□□ -1.6
Sox9Q04887 Gm14909-201ENSMUST00000117853 351 ntBASIC5.07□□□□□ -1.6
Sox9Q04887 Gm14605-201ENSMUST00000120599 268 ntBASIC5.07□□□□□ -1.6
Sox9Q04887 Gm23118-201ENSMUST00000122657 187 ntBASIC5.07□□□□□ -1.6
Sox9Q04887 Gm2020-201ENSMUST00000145242 579 ntBASIC5.07□□□□□ -1.6
Sox9Q04887 Gm22491-201ENSMUST00000157190 102 ntBASIC5.07□□□□□ -1.6
Sox9Q04887 Gm25923-201ENSMUST00000158312 138 ntBASIC5.07□□□□□ -1.6
Sox9Q04887 Gm22160-201ENSMUST00000158405 328 ntBASIC5.07□□□□□ -1.6
Sox9Q04887 Gm19932-201ENSMUST00000177033 313 ntBASIC5.07□□□□□ -1.6
Sox9Q04887 Gm21815-201ENSMUST00000178213 664 ntBASIC5.07□□□□□ -1.6
Sox9Q04887 Gm10717-208ENSMUST00000179839 681 ntTSL 5 BASIC5.07□□□□□ -1.6
Sox9Q04887 Gm10717-209ENSMUST00000179982 681 ntTSL 5 BASIC5.07□□□□□ -1.6
Sox9Q04887 Gm27676-201ENSMUST00000183669 61 ntBASIC5.07□□□□□ -1.6
Sox9Q04887 Gm29556-201ENSMUST00000187591 696 ntBASIC5.07□□□□□ -1.6
Sox9Q04887 Gm43601-201ENSMUST00000196294 945 ntBASIC5.07□□□□□ -1.6
Sox9Q04887 Smr2-203ENSMUST00000196477 676 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
Sox9Q04887 Gm43035-201ENSMUST00000197626 517 ntBASIC5.07□□□□□ -1.6
Sox9Q04887 Gm43700-201ENSMUST00000200967 316 ntTSL 5 BASIC5.07□□□□□ -1.6
Sox9Q04887 Gm29754-201ENSMUST00000206269 358 ntBASIC5.07□□□□□ -1.6
Sox9Q04887 Gm45146-201ENSMUST00000207108 221 ntBASIC5.07□□□□□ -1.6
Sox9Q04887 Gm44611-201ENSMUST00000207507 355 ntBASIC5.07□□□□□ -1.6
Sox9Q04887 Gm45539-201ENSMUST00000210313 428 ntBASIC5.07□□□□□ -1.6
Sox9Q04887 AC162931.1-201ENSMUST00000214184 267 ntBASIC5.07□□□□□ -1.6
Sox9Q04887 Gm3442-201ENSMUST00000216808 710 ntBASIC5.07□□□□□ -1.6
Sox9Q04887 Gm10264-201ENSMUST00000220589 429 ntBASIC5.07□□□□□ -1.6
Sox9Q04887 AC157494.1-201ENSMUST00000221127 549 ntTSL 5 BASIC5.07□□□□□ -1.6
Sox9Q04887 AC153662.1-201ENSMUST00000222220 270 ntBASIC5.07□□□□□ -1.6
Sox9Q04887 AC173481.1-201ENSMUST00000223351 270 ntBASIC5.07□□□□□ -1.6
Sox9Q04887 Gm25859-201ENSMUST00000083710 91 ntBASIC5.07□□□□□ -1.6
Sox9Q04887 Smr2-201ENSMUST00000087043 676 ntAPPRIS P3 TSL 1 (best) BASIC5.07□□□□□ -1.6
Sox9Q04887 Gm10717-204ENSMUST00000099056 669 ntTSL 5 BASIC5.07□□□□□ -1.6
Sox9Q04887 Cdh7-209ENSMUST00000172005 3353 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
Sox9Q04887 Dsc1-201ENSMUST00000038710 3775 ntAPPRIS P2 TSL 1 (best) BASIC5.07□□□□□ -1.6
Sox9Q04887 Ryr3-202ENSMUST00000091818 15410 ntAPPRIS ALT2 TSL 5 BASIC5.07□□□□□ -1.6
Sox9Q04887 Macf1-204ENSMUST00000106213 18957 ntTSL 5 BASIC5.07□□□□□ -1.6
Sox9Q04887 Sgcd-202ENSMUST00000109220 2450 ntTSL 5 BASIC5.07□□□□□ -1.6
Sox9Q04887 Abcb7-201ENSMUST00000033695 5667 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
Sox9Q04887 Med13-201ENSMUST00000043624 10546 ntAPPRIS P1 TSL 2 BASIC5.07□□□□□ -1.6
Sox9Q04887 Ddx60-202ENSMUST00000093485 5989 ntAPPRIS ALT2 TSL 5 BASIC5.07□□□□□ -1.6
Sox9Q04887 Gm44847-201ENSMUST00000207104 1991 ntBASIC5.07□□□□□ -1.6
Sox9Q04887 Vmn1r71-210ENSMUST00000228561 4747 ntAPPRIS ALT2 BASIC5.07□□□□□ -1.6
Sox9Q04887 Abca16-202ENSMUST00000120490 5088 ntAPPRIS P5 TSL 5 BASIC5.07□□□□□ -1.6
Sox9Q04887 Lcorl-204ENSMUST00000087164 4979 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Sox9Q04887 Gm43462-201ENSMUST00000200265 3648 ntBASIC5.06□□□□□ -1.6
Sox9Q04887 Olfr824-203ENSMUST00000215217 3619 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
Sox9Q04887 Sult2a8-201ENSMUST00000063509 2143 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
Sox9Q04887 Gm6367-201ENSMUST00000178646 2464 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
Sox9Q04887 Gm14552-201ENSMUST00000126906 2098 ntTSL 5 BASIC5.06□□□□□ -1.6
Sox9Q04887 Gm12633-201ENSMUST00000117742 1705 ntBASIC5.06□□□□□ -1.6
Sox9Q04887 4930444F02Rik-201ENSMUST00000215429 6871 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
Sox9Q04887 Olfr1263-202ENSMUST00000214382 4400 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
Sox9Q04887 Nlrp4c-202ENSMUST00000121583 3373 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
Sox9Q04887 Gm13582-201ENSMUST00000146034 2655 ntTSL 2 BASIC5.06□□□□□ -1.6
Sox9Q04887 Zfp65-201ENSMUST00000073157 3957 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
Sox9Q04887 Olfr689-202ENSMUST00000215413 5819 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
Sox9Q04887 Gm14569-204ENSMUST00000169499 5181 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
Sox9Q04887 Gm23691-201ENSMUST00000101878 107 ntBASIC5.06□□□□□ -1.6
Sox9Q04887 Txndc8-201ENSMUST00000102897 620 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
Sox9Q04887 Rps24-201ENSMUST00000112384 468 ntAPPRIS ALT1 TSL 5 BASIC5.06□□□□□ -1.6
Sox9Q04887 Rps15a-ps8-201ENSMUST00000117914 387 ntBASIC5.06□□□□□ -1.6
Sox9Q04887 Rps24-ps3-201ENSMUST00000118723 402 ntBASIC5.06□□□□□ -1.6
Sox9Q04887 Gm14517-201ENSMUST00000119040 337 ntBASIC5.06□□□□□ -1.6
Sox9Q04887 Gm13785-201ENSMUST00000119099 690 ntBASIC5.06□□□□□ -1.6
Sox9Q04887 Gm12852-201ENSMUST00000119478 719 ntBASIC5.06□□□□□ -1.6
Sox9Q04887 Gm14574-201ENSMUST00000120644 279 ntBASIC5.06□□□□□ -1.6
Sox9Q04887 Gm11369-201ENSMUST00000120812 318 ntBASIC5.06□□□□□ -1.6
Sox9Q04887 Gm12486-201ENSMUST00000120887 541 ntBASIC5.06□□□□□ -1.6
Sox9Q04887 Gm15799-201ENSMUST00000120899 289 ntBASIC5.06□□□□□ -1.6
Sox9Q04887 Gm6373-201ENSMUST00000121026 360 ntBASIC5.06□□□□□ -1.6
Sox9Q04887 Hmgb1-ps5-201ENSMUST00000121058 557 ntBASIC5.06□□□□□ -1.6
Retrieved 100 of 76,532 protein–RNA pairs in 83.5 ms