Protein–RNA interactions for Protein: Q9D0R4

Ddx56, Probable ATP-dependent RNA helicase DDX56, mousemouse

Known RBP Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx56Q9D0R4 4930518J21Rik-201ENSMUST00000209557 573 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
Ddx56Q9D0R4 4930503L19Rik-202ENSMUST00000211817 913 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
Ddx56Q9D0R4 Rps26-ps1-202ENSMUST00000212102 351 ntBASIC4.96□□□□□ -1.62
Ddx56Q9D0R4 AC123618.1-201ENSMUST00000220174 360 ntBASIC4.96□□□□□ -1.62
Ddx56Q9D0R4 AC121804.2-201ENSMUST00000222531 316 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
Ddx56Q9D0R4 AC125543.1-201ENSMUST00000222778 101 ntBASIC4.96□□□□□ -1.62
Ddx56Q9D0R4 CT025525.2-201ENSMUST00000227743 423 ntBASIC4.96□□□□□ -1.62
Ddx56Q9D0R4 Gm25008-201ENSMUST00000083809 81 ntBASIC4.96□□□□□ -1.62
Ddx56Q9D0R4 Huwe1-202ENSMUST00000112622 14168 ntAPPRIS ALT2 TSL 1 (best) BASIC4.96□□□□□ -1.62
Ddx56Q9D0R4 Olfr884-202ENSMUST00000181088 3185 ntAPPRIS P1 TSL 2 BASIC4.96□□□□□ -1.62
Ddx56Q9D0R4 Olfr799-202ENSMUST00000213820 1627 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.62
Ddx56Q9D0R4 Gm7237-201ENSMUST00000148435 1401 ntTSL 5 BASIC4.96□□□□□ -1.62
Ddx56Q9D0R4 Olfr744-203ENSMUST00000216690 1765 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.62
Ddx56Q9D0R4 Gm14014-201ENSMUST00000156718 2717 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
Ddx56Q9D0R4 Herc2-201ENSMUST00000076226 15250 ntAPPRIS P2 TSL 1 (best) BASIC4.95□□□□□ -1.62
Ddx56Q9D0R4 Gm10471-201ENSMUST00000094946 2967 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
Ddx56Q9D0R4 Trpc5os-201ENSMUST00000155206 3585 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
Ddx56Q9D0R4 Nlrp4f-204ENSMUST00000221659 3551 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
Ddx56Q9D0R4 Vmn1r58-201ENSMUST00000108569 10140 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
Ddx56Q9D0R4 Fgf7-201ENSMUST00000064794 2672 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
Ddx56Q9D0R4 Gm36298-201ENSMUST00000223394 1732 ntBASIC4.95□□□□□ -1.62
Ddx56Q9D0R4 Trav8d-2-201ENSMUST00000103605 334 ntAPPRIS ALT2 BASIC4.95□□□□□ -1.62
Ddx56Q9D0R4 Gm14393-202ENSMUST00000109066 564 ntTSL 2 BASIC4.95□□□□□ -1.62
Ddx56Q9D0R4 Olfr133-201ENSMUST00000113636 1090 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
Ddx56Q9D0R4 Gm14909-201ENSMUST00000117853 351 ntBASIC4.95□□□□□ -1.62
Ddx56Q9D0R4 Gm12045-201ENSMUST00000122122 573 ntBASIC4.95□□□□□ -1.62
Ddx56Q9D0R4 Gm22958-201ENSMUST00000122512 184 ntBASIC4.95□□□□□ -1.62
Ddx56Q9D0R4 Zfp931-204ENSMUST00000131702 704 ntTSL 3 BASIC4.95□□□□□ -1.62
Ddx56Q9D0R4 Gm13209-201ENSMUST00000138492 494 ntTSL 5 BASIC4.95□□□□□ -1.62
Ddx56Q9D0R4 Gm22383-201ENSMUST00000158188 327 ntBASIC4.95□□□□□ -1.62
Ddx56Q9D0R4 Gm16114-201ENSMUST00000161930 300 ntBASIC4.95□□□□□ -1.62
Ddx56Q9D0R4 Vmn1r-ps47-201ENSMUST00000176694 907 ntBASIC4.95□□□□□ -1.62
Ddx56Q9D0R4 Gm26701-201ENSMUST00000181571 234 ntBASIC4.95□□□□□ -1.62
Ddx56Q9D0R4 Gm8649-201ENSMUST00000181799 233 ntBASIC4.95□□□□□ -1.62
Ddx56Q9D0R4 Gm27202-201ENSMUST00000183838 512 ntTSL 5 BASIC4.95□□□□□ -1.62
Ddx56Q9D0R4 Gm3145-201ENSMUST00000188584 220 ntBASIC4.95□□□□□ -1.62
Ddx56Q9D0R4 Gm37727-201ENSMUST00000191637 819 ntBASIC4.95□□□□□ -1.62
Ddx56Q9D0R4 Gm32391-201ENSMUST00000191839 540 ntTSL 2 BASIC4.95□□□□□ -1.62
Ddx56Q9D0R4 Gm43541-201ENSMUST00000197208 581 ntBASIC4.95□□□□□ -1.62
Ddx56Q9D0R4 Rps27-206ENSMUST00000197361 329 ntTSL 3 BASIC4.95□□□□□ -1.62
Ddx56Q9D0R4 Gm43114-201ENSMUST00000198298 343 ntBASIC4.95□□□□□ -1.62
Ddx56Q9D0R4 Gm36159-201ENSMUST00000206737 549 ntTSL 3 BASIC4.95□□□□□ -1.62
Ddx56Q9D0R4 Gm30954-201ENSMUST00000208715 1210 ntTSL 5 BASIC4.95□□□□□ -1.62
Ddx56Q9D0R4 Gm8423-201ENSMUST00000211387 607 ntBASIC4.95□□□□□ -1.62
Ddx56Q9D0R4 AC127279.1-201ENSMUST00000220140 637 ntBASIC4.95□□□□□ -1.62
Ddx56Q9D0R4 AC154840.1-201ENSMUST00000225216 408 ntBASIC4.95□□□□□ -1.62
Ddx56Q9D0R4 AC112142.1-206ENSMUST00000228136 982 ntBASIC4.95□□□□□ -1.62
Ddx56Q9D0R4 Gm4779-201ENSMUST00000056225 672 ntTSL 5 BASIC4.95□□□□□ -1.62
Ddx56Q9D0R4 Prl3d2-201ENSMUST00000080755 853 ntAPPRIS P2 TSL 5 BASIC4.95□□□□□ -1.62
Ddx56Q9D0R4 Olfr1253-201ENSMUST00000099765 957 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
Ddx56Q9D0R4 Olfr1241-201ENSMUST00000099778 945 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
Ddx56Q9D0R4 Lin28b-201ENSMUST00000079390 5402 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
Ddx56Q9D0R4 Trim12c-201ENSMUST00000059037 3740 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
Ddx56Q9D0R4 Zfp950-204ENSMUST00000143264 4825 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
Ddx56Q9D0R4 Gm2033-201ENSMUST00000210753 2287 ntBASIC4.95□□□□□ -1.62
Ddx56Q9D0R4 Olfr301-201ENSMUST00000174362 1937 ntAPPRIS P1 TSL 3 BASIC4.95□□□□□ -1.62
Ddx56Q9D0R4 Btbd35f15-201ENSMUST00000186329 1917 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
Ddx56Q9D0R4 Gm43209-201ENSMUST00000198949 1588 ntBASIC4.95□□□□□ -1.62
Ddx56Q9D0R4 Ptgs2-201ENSMUST00000035065 4453 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
Ddx56Q9D0R4 Olfr1196-202ENSMUST00000216928 4270 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
Ddx56Q9D0R4 Spag17-204ENSMUST00000164539 7862 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
Ddx56Q9D0R4 Gm28360-201ENSMUST00000187455 1491 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
Ddx56Q9D0R4 Vmn1r35-202ENSMUST00000227346 1854 ntBASIC4.94□□□□□ -1.62
Ddx56Q9D0R4 Olfr1226-206ENSMUST00000217601 2670 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
Ddx56Q9D0R4 Zfp708-203ENSMUST00000190566 2406 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
Ddx56Q9D0R4 Klra2-201ENSMUST00000032306 1799 ntAPPRIS P3 TSL 1 (best) BASIC4.94□□□□□ -1.62
Ddx56Q9D0R4 Gm10521-201ENSMUST00000097466 2574 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
Ddx56Q9D0R4 Gm38265-201ENSMUST00000193479 3766 ntBASIC4.94□□□□□ -1.62
Ddx56Q9D0R4 A530053G22Rik-201ENSMUST00000060147 1526 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
Ddx56Q9D0R4 Olfr1467-202ENSMUST00000215096 3671 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
Ddx56Q9D0R4 Gm24124-201ENSMUST00000104103 132 ntBASIC4.94□□□□□ -1.62
Ddx56Q9D0R4 Gm14815-201ENSMUST00000120060 488 ntBASIC4.94□□□□□ -1.62
Ddx56Q9D0R4 Gm15870-201ENSMUST00000132657 644 ntTSL 3 BASIC4.94□□□□□ -1.62
Ddx56Q9D0R4 Gm22601-201ENSMUST00000157595 250 ntBASIC4.94□□□□□ -1.62
Ddx56Q9D0R4 Gm23546-201ENSMUST00000158211 137 ntBASIC4.94□□□□□ -1.62
Ddx56Q9D0R4 Gm15838-201ENSMUST00000161575 180 ntBASIC4.94□□□□□ -1.62
Ddx56Q9D0R4 Gm17183-201ENSMUST00000171170 493 ntBASIC4.94□□□□□ -1.62
Ddx56Q9D0R4 Gm20711-201ENSMUST00000177351 714 ntTSL 3 BASIC4.94□□□□□ -1.62
Ddx56Q9D0R4 Trav7-3-201ENSMUST00000177622 402 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
Ddx56Q9D0R4 Gm26988-201ENSMUST00000183296 945 ntBASIC4.94□□□□□ -1.62
Ddx56Q9D0R4 Gm43828-201ENSMUST00000196890 639 ntBASIC4.94□□□□□ -1.62
Ddx56Q9D0R4 4930459L07Rik-201ENSMUST00000199751 420 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
Ddx56Q9D0R4 Gm34091-201ENSMUST00000200875 604 ntBASIC4.94□□□□□ -1.62
Ddx56Q9D0R4 Gm43232-201ENSMUST00000201346 364 ntBASIC4.94□□□□□ -1.62
Ddx56Q9D0R4 Gm43026-201ENSMUST00000202972 325 ntBASIC4.94□□□□□ -1.62
Ddx56Q9D0R4 Gm32308-201ENSMUST00000203053 280 ntBASIC4.94□□□□□ -1.62
Ddx56Q9D0R4 Gm44076-201ENSMUST00000203072 520 ntBASIC4.94□□□□□ -1.62
Ddx56Q9D0R4 Gm44274-201ENSMUST00000203417 256 ntBASIC4.94□□□□□ -1.62
Ddx56Q9D0R4 Gm44128-201ENSMUST00000204909 219 ntBASIC4.94□□□□□ -1.62
Ddx56Q9D0R4 Gm45523-201ENSMUST00000210712 799 ntBASIC4.94□□□□□ -1.62
Ddx56Q9D0R4 Gm35548-201ENSMUST00000214348 441 ntTSL 5 BASIC4.94□□□□□ -1.62
Ddx56Q9D0R4 AC127371.1-201ENSMUST00000228516 312 ntBASIC4.94□□□□□ -1.62
Ddx56Q9D0R4 4930524N10Rik-201ENSMUST00000082357 919 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
Ddx56Q9D0R4 Gm8744-201ENSMUST00000204475 3581 ntBASIC4.94□□□□□ -1.62
Ddx56Q9D0R4 4932438A13Rik-217ENSMUST00000152564 15541 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
Ddx56Q9D0R4 Gm14033-201ENSMUST00000128307 2265 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
Ddx56Q9D0R4 Gm28465-202ENSMUST00000220779 1701 ntTSL 5 BASIC4.94□□□□□ -1.62
Ddx56Q9D0R4 Gm38259-201ENSMUST00000194602 3534 ntBASIC4.94□□□□□ -1.62
Ddx56Q9D0R4 Zfp426-201ENSMUST00000080386 2417 ntAPPRIS P3 TSL 1 (best) BASIC4.94□□□□□ -1.62
Ddx56Q9D0R4 Gm38505-201ENSMUST00000174005 1326 ntTSL 5 BASIC4.94□□□□□ -1.62
Retrieved 100 of 76,532 protein–RNA pairs in 83.1 ms