Protein–RNA interactions for Protein: Q8C6K9

Col6a6, Collagen alpha-6(VI) chain, mousemouse

Predictions only

Length 2,265 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6Q8C6K9 Gm37789-201ENSMUST00000192862 2889 ntBASIC2.83□□□□□ -1.96
Col6a6Q8C6K9 Macc1-203ENSMUST00000221917 4272 ntAPPRIS P1 TSL 5 BASIC2.82□□□□□ -1.96
Col6a6Q8C6K9 Gm16327-201ENSMUST00000137146 228 ntBASIC2.82□□□□□ -1.96
Col6a6Q8C6K9 Gm11665-201ENSMUST00000148136 285 ntTSL 5 BASIC2.82□□□□□ -1.96
Col6a6Q8C6K9 Gm13748-201ENSMUST00000149820 378 ntTSL 2 BASIC2.82□□□□□ -1.96
Col6a6Q8C6K9 Gm22141-201ENSMUST00000157403 277 ntBASIC2.82□□□□□ -1.96
Col6a6Q8C6K9 Gm25707-201ENSMUST00000175120 96 ntBASIC2.82□□□□□ -1.96
Col6a6Q8C6K9 Gm20660-201ENSMUST00000177515 289 ntBASIC2.82□□□□□ -1.96
Col6a6Q8C6K9 Gm28118-201ENSMUST00000185957 294 ntBASIC2.82□□□□□ -1.96
Col6a6Q8C6K9 Gm43491-201ENSMUST00000197133 784 ntBASIC2.82□□□□□ -1.96
Col6a6Q8C6K9 Igkv1-115-201ENSMUST00000198714 302 ntBASIC2.82□□□□□ -1.96
Col6a6Q8C6K9 Mbd3l1-203ENSMUST00000215255 708 ntAPPRIS P1 TSL 3 BASIC2.82□□□□□ -1.96
Col6a6Q8C6K9 Olfr229-201ENSMUST00000076802 924 ntAPPRIS P1 BASIC2.82□□□□□ -1.96
Col6a6Q8C6K9 Olfr746-201ENSMUST00000080616 945 ntAPPRIS P1 BASIC2.82□□□□□ -1.96
Col6a6Q8C6K9 Gm3259-201ENSMUST00000101015 2504 ntAPPRIS P2 TSL 1 (best) BASIC2.82□□□□□ -1.96
Col6a6Q8C6K9 Olfr653-203ENSMUST00000217466 4786 ntAPPRIS P1 TSL 5 BASIC2.82□□□□□ -1.96
Col6a6Q8C6K9 H2al1n-201ENSMUST00000105137 514 ntAPPRIS P1 BASIC2.82□□□□□ -1.96
Col6a6Q8C6K9 Gm13167-201ENSMUST00000118554 578 ntBASIC2.82□□□□□ -1.96
Col6a6Q8C6K9 2210414B05Rik-201ENSMUST00000139600 872 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
Col6a6Q8C6K9 Gm24780-201ENSMUST00000157635 143 ntBASIC2.82□□□□□ -1.96
Col6a6Q8C6K9 4930556I23Rik-201ENSMUST00000160659 560 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
Col6a6Q8C6K9 Vmn1r139-202ENSMUST00000173668 753 ntTSL 3 BASIC2.82□□□□□ -1.96
Col6a6Q8C6K9 Gm29395-201ENSMUST00000188551 1049 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
Col6a6Q8C6K9 Gm29359-201ENSMUST00000191007 495 ntTSL 5 BASIC2.82□□□□□ -1.96
Col6a6Q8C6K9 Gm5552-201ENSMUST00000197149 515 ntBASIC2.82□□□□□ -1.96
Col6a6Q8C6K9 Gm42919-201ENSMUST00000197753 1284 ntBASIC2.82□□□□□ -1.96
Col6a6Q8C6K9 3830406C13Rik-203ENSMUST00000223631 1014 ntBASIC2.82□□□□□ -1.96
Col6a6Q8C6K9 Gm43879-201ENSMUST00000203811 3760 ntBASIC2.82□□□□□ -1.96
Col6a6Q8C6K9 Rd3l-203ENSMUST00000189759 1427 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
Col6a6Q8C6K9 9330159F19Rik-201ENSMUST00000092627 5681 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
Col6a6Q8C6K9 Olfr1309-206ENSMUST00000217452 5257 ntAPPRIS P1 TSL 5 BASIC2.82□□□□□ -1.96
Col6a6Q8C6K9 Gm38090-201ENSMUST00000195733 1942 ntBASIC2.82□□□□□ -1.96
Col6a6Q8C6K9 Gm7470-201ENSMUST00000194219 2095 ntBASIC2.82□□□□□ -1.96
Col6a6Q8C6K9 Slc22a30-203ENSMUST00000120540 2598 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
Col6a6Q8C6K9 Cdk13-205ENSMUST00000222800 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC2.82□□□□□ -1.96
Col6a6Q8C6K9 Fam71d-205ENSMUST00000219551 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC2.81□□□□□ -1.96
Col6a6Q8C6K9 Gm12001-201ENSMUST00000121727 913 ntBASIC2.81□□□□□ -1.96
Col6a6Q8C6K9 Gm24380-201ENSMUST00000122696 324 ntBASIC2.81□□□□□ -1.96
Col6a6Q8C6K9 Gm43685-201ENSMUST00000198876 706 ntTSL 3 BASIC2.81□□□□□ -1.96
Col6a6Q8C6K9 Gm33981-201ENSMUST00000219918 660 ntTSL 5 BASIC2.81□□□□□ -1.96
Col6a6Q8C6K9 AC120555.1-201ENSMUST00000221020 222 ntTSL 5 BASIC2.81□□□□□ -1.96
Col6a6Q8C6K9 AC102815.1-201ENSMUST00000226662 1061 ntBASIC2.81□□□□□ -1.96
Col6a6Q8C6K9 Olfr972-201ENSMUST00000079767 945 ntAPPRIS P1 BASIC2.81□□□□□ -1.96
Col6a6Q8C6K9 n-R5s176-201ENSMUST00000082683 109 ntBASIC2.81□□□□□ -1.96
Col6a6Q8C6K9 n-R5s205-201ENSMUST00000083149 125 ntBASIC2.81□□□□□ -1.96
Col6a6Q8C6K9 Olfr235-205ENSMUST00000214638 3459 ntAPPRIS P1 TSL 5 BASIC2.81□□□□□ -1.96
Col6a6Q8C6K9 Vmn1r77-204ENSMUST00000228213 8094 ntAPPRIS ALT2 BASIC2.81□□□□□ -1.96
Col6a6Q8C6K9 Olfr1111-202ENSMUST00000214492 1616 ntAPPRIS P1 TSL 5 BASIC2.81□□□□□ -1.96
Col6a6Q8C6K9 Gm18432-201ENSMUST00000195568 1451 ntBASIC2.81□□□□□ -1.96
Col6a6Q8C6K9 Serpinb6c-201ENSMUST00000110273 1325 ntAPPRIS P1 TSL 5 BASIC2.81□□□□□ -1.96
Col6a6Q8C6K9 Ccr2-202ENSMUST00000165984 3515 ntAPPRIS P1 BASIC2.81□□□□□ -1.96
Col6a6Q8C6K9 Olfr469-202ENSMUST00000213252 3164 ntAPPRIS P1 TSL 5 BASIC2.81□□□□□ -1.96
Col6a6Q8C6K9 Olfr905-202ENSMUST00000214377 4429 ntAPPRIS P1 TSL 5 BASIC2.81□□□□□ -1.96
Col6a6Q8C6K9 Olfr612-202ENSMUST00000214269 2420 ntAPPRIS P1 TSL 5 BASIC2.81□□□□□ -1.96
Col6a6Q8C6K9 Tfpi-203ENSMUST00000111711 3968 ntTSL 5 BASIC2.81□□□□□ -1.96
Col6a6Q8C6K9 Traj24-201ENSMUST00000103717 63 ntAPPRIS P1 BASIC2.81□□□□□ -1.96
Col6a6Q8C6K9 Mir466k-201ENSMUST00000116774 122 ntBASIC2.81□□□□□ -1.96
Col6a6Q8C6K9 Gm13865-201ENSMUST00000120957 865 ntBASIC2.81□□□□□ -1.96
Col6a6Q8C6K9 Gm24914-201ENSMUST00000157285 313 ntBASIC2.81□□□□□ -1.96
Col6a6Q8C6K9 Gm24720-201ENSMUST00000157518 166 ntBASIC2.81□□□□□ -1.96
Col6a6Q8C6K9 Gm26988-201ENSMUST00000183296 945 ntBASIC2.81□□□□□ -1.96
Col6a6Q8C6K9 Gm28877-201ENSMUST00000191349 604 ntBASIC2.81□□□□□ -1.96
Col6a6Q8C6K9 1700108N06Rik-201ENSMUST00000196572 681 ntTSL 5 BASIC2.81□□□□□ -1.96
Col6a6Q8C6K9 Gm36551-201ENSMUST00000196787 300 ntTSL 5 BASIC2.81□□□□□ -1.96
Col6a6Q8C6K9 Etd-201ENSMUST00000074232 478 ntAPPRIS P1 TSL 2 BASIC2.81□□□□□ -1.96
Col6a6Q8C6K9 Olfr611-201ENSMUST00000078108 972 ntAPPRIS P1 BASIC2.81□□□□□ -1.96
Col6a6Q8C6K9 Uty-205ENSMUST00000143286 5083 ntAPPRIS ALT2 TSL 1 (best) BASIC2.81□□□□□ -1.96
Col6a6Q8C6K9 Scai-201ENSMUST00000038874 10709 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
Col6a6Q8C6K9 Gm43875-201ENSMUST00000203319 2475 ntBASIC2.81□□□□□ -1.96
Col6a6Q8C6K9 Zfp534-201ENSMUST00000117638 2885 ntAPPRIS P1 TSL 2 BASIC2.8□□□□□ -1.96
Col6a6Q8C6K9 AC158921.1-201ENSMUST00000227861 3468 ntBASIC2.8□□□□□ -1.96
Col6a6Q8C6K9 Ighv1-54-201ENSMUST00000103525 377 ntAPPRIS P1 BASIC2.8□□□□□ -1.96
Col6a6Q8C6K9 Gm20651-201ENSMUST00000177219 329 ntBASIC2.8□□□□□ -1.96
Col6a6Q8C6K9 Gm37473-201ENSMUST00000195079 674 ntTSL 5 BASIC2.8□□□□□ -1.96
Col6a6Q8C6K9 Gm43521-201ENSMUST00000197838 255 ntBASIC2.8□□□□□ -1.96
Col6a6Q8C6K9 Gm43107-201ENSMUST00000198729 255 ntBASIC2.8□□□□□ -1.96
Col6a6Q8C6K9 Olfr1311-201ENSMUST00000208536 943 ntAPPRIS P1 BASIC2.8□□□□□ -1.96
Col6a6Q8C6K9 CT025680.1-201ENSMUST00000217375 375 ntBASIC2.8□□□□□ -1.96
Col6a6Q8C6K9 4930559C10Rik-201ENSMUST00000223202 649 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
Col6a6Q8C6K9 AC166369.3-201ENSMUST00000227286 409 ntBASIC2.8□□□□□ -1.96
Col6a6Q8C6K9 Olfr1093-201ENSMUST00000055273 969 ntAPPRIS P1 BASIC2.8□□□□□ -1.96
Col6a6Q8C6K9 Gm4945-201ENSMUST00000075152 453 ntBASIC2.8□□□□□ -1.96
Col6a6Q8C6K9 AC124346.2-201ENSMUST00000217986 5083 ntBASIC2.8□□□□□ -1.96
Col6a6Q8C6K9 Olfr205-202ENSMUST00000213910 1650 ntAPPRIS P1 TSL 5 BASIC2.8□□□□□ -1.96
Col6a6Q8C6K9 Vmn2r-ps43-201ENSMUST00000173798 2473 ntBASIC2.8□□□□□ -1.96
Col6a6Q8C6K9 Trav8n-2-201ENSMUST00000103632 408 ntAPPRIS P1 BASIC2.8□□□□□ -1.96
Col6a6Q8C6K9 Gm23911-201ENSMUST00000104596 134 ntBASIC2.8□□□□□ -1.96
Col6a6Q8C6K9 Gm12568-201ENSMUST00000117362 624 ntBASIC2.8□□□□□ -1.96
Col6a6Q8C6K9 Hmgb1-ps2-201ENSMUST00000117548 636 ntBASIC2.8□□□□□ -1.96
Col6a6Q8C6K9 Gm13379-201ENSMUST00000118053 621 ntBASIC2.8□□□□□ -1.96
Col6a6Q8C6K9 Hmgb1-ps4-201ENSMUST00000118281 635 ntBASIC2.8□□□□□ -1.96
Col6a6Q8C6K9 Hmgb1-ps3-201ENSMUST00000118415 636 ntBASIC2.8□□□□□ -1.96
Col6a6Q8C6K9 Gm11881-201ENSMUST00000119408 572 ntBASIC2.8□□□□□ -1.96
Col6a6Q8C6K9 Gm13438-201ENSMUST00000120100 573 ntBASIC2.8□□□□□ -1.96
Col6a6Q8C6K9 Gm14562-201ENSMUST00000129885 543 ntBASIC2.8□□□□□ -1.96
Col6a6Q8C6K9 Gm13411-201ENSMUST00000149429 414 ntTSL 2 BASIC2.8□□□□□ -1.96
Col6a6Q8C6K9 Gm22532-201ENSMUST00000158822 140 ntBASIC2.8□□□□□ -1.96
Col6a6Q8C6K9 Gm10075-201ENSMUST00000162030 545 ntBASIC2.8□□□□□ -1.96
Col6a6Q8C6K9 Hmgb1-ps9-201ENSMUST00000179479 645 ntBASIC2.8□□□□□ -1.96
Col6a6Q8C6K9 Gm5527-201ENSMUST00000179821 642 ntBASIC2.8□□□□□ -1.96
Retrieved 100 of 76,532 protein–RNA pairs in 82.9 ms