Protein–RNA interactions for Protein: Q8BWR4

Usp40, Ubiquitin carboxyl-terminal hydrolase 40, mousemouse

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp40Q8BWR4 Gm26655-203ENSMUST00000181095 2078 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Usp40Q8BWR4 Gm26680-203ENSMUST00000181701 2078 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Usp40Q8BWR4 Gm26630-204ENSMUST00000181759 2078 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Usp40Q8BWR4 Gm26650-204ENSMUST00000181881 2078 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Usp40Q8BWR4 AC174797.3-203ENSMUST00000225749 2078 ntBASIC6.09□□□□□ -1.43
Usp40Q8BWR4 Ralgapa1-211ENSMUST00000220367 7473 ntAPPRIS ALT2 TSL 5 BASIC6.09□□□□□ -1.44
Usp40Q8BWR4 Gm43011-201ENSMUST00000197897 4433 ntBASIC6.09□□□□□ -1.44
Usp40Q8BWR4 Hmgb1-203ENSMUST00000110505 1720 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Usp40Q8BWR4 Vmn1r171-205ENSMUST00000226771 2718 ntAPPRIS ALT2 BASIC6.08□□□□□ -1.44
Usp40Q8BWR4 Hc-201ENSMUST00000028233 5445 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Usp40Q8BWR4 Tnpo1-201ENSMUST00000109399 8445 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Usp40Q8BWR4 Tom1l1-201ENSMUST00000020849 4308 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Usp40Q8BWR4 Gm11823-201ENSMUST00000130582 2278 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Usp40Q8BWR4 Igkv1-88-201ENSMUST00000103336 362 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
Usp40Q8BWR4 Clec1b-203ENSMUST00000112081 614 ntAPPRIS ALT2 TSL 1 (best) BASIC6.08□□□□□ -1.44
Usp40Q8BWR4 Gm15076-201ENSMUST00000117076 474 ntBASIC6.08□□□□□ -1.44
Usp40Q8BWR4 Gm12102-201ENSMUST00000118251 604 ntBASIC6.08□□□□□ -1.44
Usp40Q8BWR4 Gm14881-201ENSMUST00000120366 372 ntBASIC6.08□□□□□ -1.44
Usp40Q8BWR4 Olfr990-ps1-201ENSMUST00000120485 904 ntBASIC6.08□□□□□ -1.44
Usp40Q8BWR4 Gm12880-201ENSMUST00000120652 494 ntBASIC6.08□□□□□ -1.44
Usp40Q8BWR4 Sult2a-ps2-201ENSMUST00000121135 405 ntBASIC6.08□□□□□ -1.44
Usp40Q8BWR4 Gm6619-201ENSMUST00000159229 608 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Usp40Q8BWR4 4430402I18Rik-203ENSMUST00000160542 1057 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Usp40Q8BWR4 5430401F13Rik-202ENSMUST00000161385 608 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Usp40Q8BWR4 Gm3191-201ENSMUST00000167139 346 ntBASIC6.08□□□□□ -1.44
Usp40Q8BWR4 Vmn1r-ps31-201ENSMUST00000174112 238 ntBASIC6.08□□□□□ -1.44
Usp40Q8BWR4 Gm28016-201ENSMUST00000184594 196 ntBASIC6.08□□□□□ -1.44
Usp40Q8BWR4 Gm28847-201ENSMUST00000186778 700 ntBASIC6.08□□□□□ -1.44
Usp40Q8BWR4 4930584F24Rik-203ENSMUST00000197091 954 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Usp40Q8BWR4 Gm18867-201ENSMUST00000198022 1179 ntBASIC6.08□□□□□ -1.44
Usp40Q8BWR4 Gm44058-201ENSMUST00000204335 467 ntBASIC6.08□□□□□ -1.44
Usp40Q8BWR4 Gm44055-201ENSMUST00000204376 247 ntBASIC6.08□□□□□ -1.44
Usp40Q8BWR4 Gm17987-201ENSMUST00000206902 603 ntBASIC6.08□□□□□ -1.44
Usp40Q8BWR4 Olfr200-ps1-201ENSMUST00000207964 874 ntBASIC6.08□□□□□ -1.44
Usp40Q8BWR4 Olfr638-201ENSMUST00000209757 966 ntAPPRIS P2 BASIC6.08□□□□□ -1.44
Usp40Q8BWR4 2210414F02Rik-201ENSMUST00000215316 396 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Usp40Q8BWR4 Gm18016-201ENSMUST00000216119 801 ntBASIC6.08□□□□□ -1.44
Usp40Q8BWR4 Gm46994-201ENSMUST00000221523 219 ntBASIC6.08□□□□□ -1.44
Usp40Q8BWR4 Olfr57-201ENSMUST00000082244 1080 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
Usp40Q8BWR4 Olfr561-201ENSMUST00000098217 1071 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
Usp40Q8BWR4 Olfr1218-201ENSMUST00000099798 936 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
Usp40Q8BWR4 Gm43527-201ENSMUST00000198749 3178 ntBASIC6.08□□□□□ -1.44
Usp40Q8BWR4 Gm37780-201ENSMUST00000194117 1873 ntBASIC6.08□□□□□ -1.44
Usp40Q8BWR4 0610010F05Rik-202ENSMUST00000093267 3646 ntAPPRIS ALT2 TSL 5 BASIC6.08□□□□□ -1.44
Usp40Q8BWR4 Gm14912-201ENSMUST00000120166 1773 ntBASIC6.08□□□□□ -1.44
Usp40Q8BWR4 Fbxw28-201ENSMUST00000112039 1497 ntAPPRIS P4 TSL 1 (best) BASIC6.08□□□□□ -1.44
Usp40Q8BWR4 Fbxw15-201ENSMUST00000056745 1495 ntAPPRIS P2 TSL 1 (best) BASIC6.08□□□□□ -1.44
Usp40Q8BWR4 Lrp1b-208ENSMUST00000167270 10071 ntTSL 5 BASIC6.08□□□□□ -1.44
Usp40Q8BWR4 Zfp329-201ENSMUST00000072222 6727 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Usp40Q8BWR4 Ubtfl1-203ENSMUST00000169398 4430 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Usp40Q8BWR4 Gm20356-201ENSMUST00000193390 2477 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Usp40Q8BWR4 AC103672.3-201ENSMUST00000227649 3243 ntBASIC6.07□□□□□ -1.44
Usp40Q8BWR4 Brip1-201ENSMUST00000044423 6931 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Usp40Q8BWR4 Usf3-204ENSMUST00000169582 12604 ntAPPRIS P2 TSL 5 BASIC6.07□□□□□ -1.44
Usp40Q8BWR4 Gm22488-201ENSMUST00000116811 127 ntBASIC6.07□□□□□ -1.44
Usp40Q8BWR4 Gm14365-201ENSMUST00000117535 587 ntBASIC6.07□□□□□ -1.44
Usp40Q8BWR4 Gm14794-201ENSMUST00000118181 192 ntBASIC6.07□□□□□ -1.44
Usp40Q8BWR4 Gm22733-201ENSMUST00000158094 91 ntBASIC6.07□□□□□ -1.44
Usp40Q8BWR4 Vmn1r122-201ENSMUST00000164409 918 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
Usp40Q8BWR4 Vmn1r159-201ENSMUST00000167871 918 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
Usp40Q8BWR4 Gm27522-201ENSMUST00000183949 230 ntBASIC6.07□□□□□ -1.44
Usp40Q8BWR4 Gm28702-201ENSMUST00000188276 253 ntTSL 5 BASIC6.07□□□□□ -1.44
Usp40Q8BWR4 Gm38270-201ENSMUST00000192721 407 ntBASIC6.07□□□□□ -1.44
Usp40Q8BWR4 Gm37173-201ENSMUST00000194498 1017 ntBASIC6.07□□□□□ -1.44
Usp40Q8BWR4 Gm44463-201ENSMUST00000198895 137 ntBASIC6.07□□□□□ -1.44
Usp40Q8BWR4 Gm43150-201ENSMUST00000200931 636 ntTSL 3 BASIC6.07□□□□□ -1.44
Usp40Q8BWR4 Gm44389-201ENSMUST00000203795 182 ntBASIC6.07□□□□□ -1.44
Usp40Q8BWR4 Olfr277-ps1-201ENSMUST00000205749 285 ntBASIC6.07□□□□□ -1.44
Usp40Q8BWR4 Ifitm6-202ENSMUST00000209328 678 ntAPPRIS P2 TSL 5 BASIC6.07□□□□□ -1.44
Usp40Q8BWR4 Gm45789-201ENSMUST00000213038 364 ntBASIC6.07□□□□□ -1.44
Usp40Q8BWR4 Gm7692-201ENSMUST00000213534 409 ntBASIC6.07□□□□□ -1.44
Usp40Q8BWR4 AC122188.1-201ENSMUST00000217534 312 ntBASIC6.07□□□□□ -1.44
Usp40Q8BWR4 1700024I08Rik-203ENSMUST00000222372 754 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Usp40Q8BWR4 AC113031.5-201ENSMUST00000227116 606 ntBASIC6.07□□□□□ -1.44
Usp40Q8BWR4 AC154738.5-201ENSMUST00000227397 310 ntBASIC6.07□□□□□ -1.44
Usp40Q8BWR4 Olfr395-201ENSMUST00000072991 939 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
Usp40Q8BWR4 Zfp972-201ENSMUST00000081529 472 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
Usp40Q8BWR4 n-R5s160-201ENSMUST00000083096 120 ntBASIC6.07□□□□□ -1.44
Usp40Q8BWR4 Vmn1r81-201ENSMUST00000086232 921 ntAPPRIS P2 BASIC6.07□□□□□ -1.44
Usp40Q8BWR4 Gpm6a-201ENSMUST00000033915 3215 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Usp40Q8BWR4 Gm37733-201ENSMUST00000195478 2962 ntBASIC6.07□□□□□ -1.44
Usp40Q8BWR4 Vmn2r6-201ENSMUST00000165012 2484 ntAPPRIS P2 TSL 5 BASIC6.07□□□□□ -1.44
Usp40Q8BWR4 Vmn2r7-203ENSMUST00000168072 2484 ntAPPRIS P2 TSL 5 BASIC6.07□□□□□ -1.44
Usp40Q8BWR4 AC129085.3-201ENSMUST00000225686 1705 ntBASIC6.07□□□□□ -1.44
Usp40Q8BWR4 A730046J19Rik-201ENSMUST00000135687 4707 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Usp40Q8BWR4 Hmcn1-202ENSMUST00000137197 16554 ntTSL 5 BASIC6.07□□□□□ -1.44
Usp40Q8BWR4 A630033H20Rik-201ENSMUST00000067249 3004 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Usp40Q8BWR4 AC167192.3-201ENSMUST00000224096 1567 ntBASIC6.06□□□□□ -1.44
Usp40Q8BWR4 Btbd35f17-201ENSMUST00000105014 1960 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
Usp40Q8BWR4 Btbd35f28-201ENSMUST00000105015 1960 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
Usp40Q8BWR4 Btbd35f18-201ENSMUST00000105019 1960 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
Usp40Q8BWR4 Btbd35f11-201ENSMUST00000105020 1960 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
Usp40Q8BWR4 Ighv5-16-201ENSMUST00000103458 350 ntAPPRIS ALT2 BASIC6.06□□□□□ -1.44
Usp40Q8BWR4 Gm25876-201ENSMUST00000104329 119 ntBASIC6.06□□□□□ -1.44
Usp40Q8BWR4 Snora64-201ENSMUST00000104521 134 ntBASIC6.06□□□□□ -1.44
Usp40Q8BWR4 Gm10936-201ENSMUST00000105264 252 ntBASIC6.06□□□□□ -1.44
Usp40Q8BWR4 Olfr379-ps1-201ENSMUST00000117349 934 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
Usp40Q8BWR4 Gm14269-201ENSMUST00000120455 306 ntBASIC6.06□□□□□ -1.44
Usp40Q8BWR4 Gm14229-201ENSMUST00000121178 850 ntBASIC6.06□□□□□ -1.44
Usp40Q8BWR4 Gm10059-201ENSMUST00000131139 171 ntBASIC6.06□□□□□ -1.44
Retrieved 100 of 76,532 protein–RNA pairs in 112.4 ms