Protein–RNA interactions for Protein: Q8BUM9

Usp43, Ubiquitin carboxyl-terminal hydrolase 43, mousemouse

Predictions only

Length 1,132 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp43Q8BUM9 Gm28699-201ENSMUST00000189193 696 ntBASIC4.29□□□□□ -1.72
Usp43Q8BUM9 Gm19224-201ENSMUST00000190477 793 ntBASIC4.29□□□□□ -1.72
Usp43Q8BUM9 Gm28655-201ENSMUST00000191538 692 ntBASIC4.29□□□□□ -1.72
Usp43Q8BUM9 Gm38353-201ENSMUST00000192351 617 ntTSL 3 BASIC4.29□□□□□ -1.72
Usp43Q8BUM9 Gm42830-201ENSMUST00000196642 313 ntBASIC4.29□□□□□ -1.72
Usp43Q8BUM9 Gm44376-201ENSMUST00000197570 128 ntBASIC4.29□□□□□ -1.72
Usp43Q8BUM9 Gm43431-201ENSMUST00000198577 340 ntBASIC4.29□□□□□ -1.72
Usp43Q8BUM9 Csn2-209ENSMUST00000199624 890 ntAPPRIS P3 TSL 5 BASIC4.29□□□□□ -1.72
Usp43Q8BUM9 Gm31230-201ENSMUST00000199725 785 ntBASIC4.29□□□□□ -1.72
Usp43Q8BUM9 Dnajc5g-202ENSMUST00000201740 581 ntAPPRIS ALT2 TSL 3 BASIC4.29□□□□□ -1.72
Usp43Q8BUM9 Gm43884-201ENSMUST00000204251 559 ntBASIC4.29□□□□□ -1.72
Usp43Q8BUM9 Gm39469-201ENSMUST00000214845 461 ntTSL 2 BASIC4.29□□□□□ -1.72
Usp43Q8BUM9 AC118733.1-201ENSMUST00000217387 1217 ntBASIC4.29□□□□□ -1.72
Usp43Q8BUM9 AC122301.3-201ENSMUST00000217707 716 ntTSL 5 BASIC4.29□□□□□ -1.72
Usp43Q8BUM9 Gm30893-201ENSMUST00000220479 903 ntTSL 5 BASIC4.29□□□□□ -1.72
Usp43Q8BUM9 CR974429.1-201ENSMUST00000220877 827 ntBASIC4.29□□□□□ -1.72
Usp43Q8BUM9 Gm19786-201ENSMUST00000222589 580 ntBASIC4.29□□□□□ -1.72
Usp43Q8BUM9 AC126253.2-201ENSMUST00000226518 205 ntBASIC4.29□□□□□ -1.72
Usp43Q8BUM9 Dnah6-203ENSMUST00000114040 12513 ntAPPRIS ALT2 TSL 5 BASIC4.29□□□□□ -1.72
Usp43Q8BUM9 mt-Co1-201ENSMUST00000082402 1545 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
Usp43Q8BUM9 Gm42927-201ENSMUST00000200624 3841 ntBASIC4.29□□□□□ -1.72
Usp43Q8BUM9 Gm17308-201ENSMUST00000181749 1997 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
Usp43Q8BUM9 Cysltr1-202ENSMUST00000113480 5142 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
Usp43Q8BUM9 Stk-ps2-201ENSMUST00000051224 4667 ntTSL 2 BASIC4.28□□□□□ -1.72
Usp43Q8BUM9 Syne1-205ENSMUST00000215295 27908 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
Usp43Q8BUM9 Gm37345-201ENSMUST00000193062 3138 ntBASIC4.28□□□□□ -1.72
Usp43Q8BUM9 Olfr709-ps1-202ENSMUST00000215468 5078 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
Usp43Q8BUM9 Gm8104-201ENSMUST00000168165 1761 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
Usp43Q8BUM9 4930533N22Rik-202ENSMUST00000206684 1503 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
Usp43Q8BUM9 Olfr393-201ENSMUST00000102523 939 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
Usp43Q8BUM9 Gm25537-201ENSMUST00000103851 109 ntBASIC4.28□□□□□ -1.72
Usp43Q8BUM9 Gm24469-201ENSMUST00000104487 131 ntBASIC4.28□□□□□ -1.72
Usp43Q8BUM9 Vmn1r-ps2-201ENSMUST00000118464 834 ntBASIC4.28□□□□□ -1.72
Usp43Q8BUM9 Gm12358-201ENSMUST00000121842 520 ntBASIC4.28□□□□□ -1.72
Usp43Q8BUM9 Gm2165-201ENSMUST00000124609 1118 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
Usp43Q8BUM9 Gm14553-201ENSMUST00000126711 1118 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
Usp43Q8BUM9 Gm2101-204ENSMUST00000137421 1118 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
Usp43Q8BUM9 Gm3669-205ENSMUST00000144018 1118 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
Usp43Q8BUM9 Gm14902-201ENSMUST00000145576 1007 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
Usp43Q8BUM9 1700129C05Rik-204ENSMUST00000162674 566 ntAPPRIS ALT2 TSL 3 BASIC4.28□□□□□ -1.72
Usp43Q8BUM9 Reg3d-202ENSMUST00000167492 644 ntTSL 5 BASIC4.28□□□□□ -1.72
Usp43Q8BUM9 Vmn1r-ps146-201ENSMUST00000176131 525 ntBASIC4.28□□□□□ -1.72
Usp43Q8BUM9 Vmn1r-ps150-201ENSMUST00000176659 736 ntBASIC4.28□□□□□ -1.72
Usp43Q8BUM9 Gm23269-201ENSMUST00000178701 107 ntBASIC4.28□□□□□ -1.72
Usp43Q8BUM9 Gm6113-201ENSMUST00000180319 639 ntBASIC4.28□□□□□ -1.72
Usp43Q8BUM9 Mir6926-201ENSMUST00000184562 68 ntBASIC4.28□□□□□ -1.72
Usp43Q8BUM9 Gm19503-201ENSMUST00000187109 241 ntBASIC4.28□□□□□ -1.72
Usp43Q8BUM9 Gm29186-201ENSMUST00000189178 660 ntTSL 2 BASIC4.28□□□□□ -1.72
Usp43Q8BUM9 Gm43140-201ENSMUST00000197317 456 ntTSL 2 BASIC4.28□□□□□ -1.72
Usp43Q8BUM9 Hcfc1r1-ps2-201ENSMUST00000199379 339 ntBASIC4.28□□□□□ -1.72
Usp43Q8BUM9 Gm44254-201ENSMUST00000204184 322 ntBASIC4.28□□□□□ -1.72
Usp43Q8BUM9 Gm19908-201ENSMUST00000204684 391 ntBASIC4.28□□□□□ -1.72
Usp43Q8BUM9 Gm44032-201ENSMUST00000204841 166 ntBASIC4.28□□□□□ -1.72
Usp43Q8BUM9 Gm8132-201ENSMUST00000204938 640 ntBASIC4.28□□□□□ -1.72
Usp43Q8BUM9 Reg3d-203ENSMUST00000205240 544 ntTSL 2 BASIC4.28□□□□□ -1.72
Usp43Q8BUM9 2200007N16Rik-201ENSMUST00000206367 238 ntBASIC4.28□□□□□ -1.72
Usp43Q8BUM9 Gm45593-201ENSMUST00000211415 752 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
Usp43Q8BUM9 Gm18160-201ENSMUST00000214279 827 ntBASIC4.28□□□□□ -1.72
Usp43Q8BUM9 AL603630.1-201ENSMUST00000214781 147 ntBASIC4.28□□□□□ -1.72
Usp43Q8BUM9 Gm46138-201ENSMUST00000215294 426 ntBASIC4.28□□□□□ -1.72
Usp43Q8BUM9 Gm46369-201ENSMUST00000221577 401 ntBASIC4.28□□□□□ -1.72
Usp43Q8BUM9 Creg1-201ENSMUST00000040298 425 ntTSL 3 BASIC4.28□□□□□ -1.72
Usp43Q8BUM9 Olfr986-201ENSMUST00000062229 1016 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
Usp43Q8BUM9 Reg3d-201ENSMUST00000089667 782 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
Usp43Q8BUM9 Olfr1116-201ENSMUST00000090717 924 ntAPPRIS P2 BASIC4.28□□□□□ -1.72
Usp43Q8BUM9 Gm42483-201ENSMUST00000197556 1742 ntBASIC4.28□□□□□ -1.72
Usp43Q8BUM9 Gm28168-201ENSMUST00000191265 2630 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
Usp43Q8BUM9 4921539E11Rik-202ENSMUST00000097944 1683 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
Usp43Q8BUM9 Gm43065-201ENSMUST00000198971 2092 ntBASIC4.28□□□□□ -1.72
Usp43Q8BUM9 Olfr1263-204ENSMUST00000217065 4186 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.73
Usp43Q8BUM9 Glra3-201ENSMUST00000000275 6508 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.73
Usp43Q8BUM9 Neb-202ENSMUST00000036934 22489 ntAPPRIS P2 TSL 5 BASIC4.27□□□□□ -1.73
Usp43Q8BUM9 Gm43826-201ENSMUST00000199604 2612 ntBASIC4.27□□□□□ -1.73
Usp43Q8BUM9 Gm42991-201ENSMUST00000196468 3837 ntBASIC4.27□□□□□ -1.73
Usp43Q8BUM9 AC124746.1-201ENSMUST00000227535 1300 ntBASIC4.27□□□□□ -1.73
Usp43Q8BUM9 Gm42721-201ENSMUST00000197165 1523 ntBASIC4.27□□□□□ -1.73
Usp43Q8BUM9 Ano5-201ENSMUST00000043944 7785 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
Usp43Q8BUM9 Vmn2r-ps43-201ENSMUST00000173798 2473 ntBASIC4.27□□□□□ -1.73
Usp43Q8BUM9 Gm3665-201ENSMUST00000177214 2461 ntBASIC4.27□□□□□ -1.73
Usp43Q8BUM9 Vmn2r-ps51-201ENSMUST00000177271 2461 ntBASIC4.27□□□□□ -1.73
Usp43Q8BUM9 Olfr1318-201ENSMUST00000058176 1690 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
Usp43Q8BUM9 Angptl3-201ENSMUST00000030280 1482 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
Usp43Q8BUM9 Gm26002-201ENSMUST00000101915 107 ntBASIC4.27□□□□□ -1.73
Usp43Q8BUM9 Gm26384-201ENSMUST00000102183 110 ntBASIC4.27□□□□□ -1.73
Usp43Q8BUM9 Ssx9-201ENSMUST00000103001 602 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
Usp43Q8BUM9 Gm14751-201ENSMUST00000117693 222 ntBASIC4.27□□□□□ -1.73
Usp43Q8BUM9 Gm15212-201ENSMUST00000122403 466 ntBASIC4.27□□□□□ -1.73
Usp43Q8BUM9 Gm15537-201ENSMUST00000126677 485 ntTSL 2 BASIC4.27□□□□□ -1.73
Usp43Q8BUM9 Gm13625-201ENSMUST00000149283 480 ntTSL 5 BASIC4.27□□□□□ -1.73
Usp43Q8BUM9 Gm25908-201ENSMUST00000157624 98 ntBASIC4.27□□□□□ -1.73
Usp43Q8BUM9 Gm22726-201ENSMUST00000158089 179 ntBASIC4.27□□□□□ -1.73
Usp43Q8BUM9 Gm26354-201ENSMUST00000158221 129 ntBASIC4.27□□□□□ -1.73
Usp43Q8BUM9 Gm16588-201ENSMUST00000162889 355 ntBASIC4.27□□□□□ -1.73
Usp43Q8BUM9 Gm3111-201ENSMUST00000167426 490 ntBASIC4.27□□□□□ -1.73
Usp43Q8BUM9 4930579O11Rik-202ENSMUST00000168243 672 ntTSL 3 BASIC4.27□□□□□ -1.73
Usp43Q8BUM9 Gm25037-201ENSMUST00000175418 110 ntBASIC4.27□□□□□ -1.73
Usp43Q8BUM9 Gm18588-201ENSMUST00000177308 492 ntBASIC4.27□□□□□ -1.73
Usp43Q8BUM9 Gm21883-201ENSMUST00000179028 372 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
Usp43Q8BUM9 Gm21789-201ENSMUST00000179547 372 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
Usp43Q8BUM9 Gm21870-201ENSMUST00000179973 372 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
Retrieved 100 of 76,532 protein–RNA pairs in 66.5 ms