Protein–RNA interactions for Protein: Q80VI1

Trim56, E3 ubiquitin-protein ligase TRIM56, mousemouse

Known RBP Predictions only

Length 734 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim56Q80VI1 Vmn2r117-201ENSMUST00000171996 2574 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Trim56Q80VI1 Olfr178-202ENSMUST00000206523 2095 ntAPPRIS P1 TSL 3 BASIC5.81□□□□□ -1.48
Trim56Q80VI1 Gm38243-201ENSMUST00000194737 1567 ntBASIC5.81□□□□□ -1.48
Trim56Q80VI1 Olfr1290-204ENSMUST00000217611 2729 ntAPPRIS P1 TSL 3 BASIC5.81□□□□□ -1.48
Trim56Q80VI1 Gm12845-201ENSMUST00000203629 1767 ntAPPRIS P5 TSL 5 BASIC5.81□□□□□ -1.48
Trim56Q80VI1 Olfr979-202ENSMUST00000215523 3397 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
Trim56Q80VI1 Mir450-2-201ENSMUST00000102444 69 ntBASIC5.81□□□□□ -1.48
Trim56Q80VI1 Trappc1-203ENSMUST00000102602 751 ntAPPRIS P1 TSL 2 BASIC5.81□□□□□ -1.48
Trim56Q80VI1 Trav6n-6-201ENSMUST00000103613 287 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
Trim56Q80VI1 Gm10972-201ENSMUST00000107276 81 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
Trim56Q80VI1 Gm9059-201ENSMUST00000118319 183 ntBASIC5.81□□□□□ -1.48
Trim56Q80VI1 Gm5384-201ENSMUST00000120313 463 ntBASIC5.81□□□□□ -1.48
Trim56Q80VI1 Gm13867-201ENSMUST00000120844 395 ntBASIC5.81□□□□□ -1.48
Trim56Q80VI1 2610024D14Rik-201ENSMUST00000121233 294 ntBASIC5.81□□□□□ -1.48
Trim56Q80VI1 Nell1os-201ENSMUST00000134584 489 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Trim56Q80VI1 Gm13942-201ENSMUST00000136950 325 ntTSL 3 BASIC5.81□□□□□ -1.48
Trim56Q80VI1 Pagr1a-201ENSMUST00000162069 422 ntTSL 3 BASIC5.81□□□□□ -1.48
Trim56Q80VI1 Gm20523-201ENSMUST00000174340 1124 ntBASIC5.81□□□□□ -1.48
Trim56Q80VI1 Mir3090-201ENSMUST00000175597 87 ntBASIC5.81□□□□□ -1.48
Trim56Q80VI1 Gm22307-201ENSMUST00000180019 107 ntBASIC5.81□□□□□ -1.48
Trim56Q80VI1 Trav12-2-201ENSMUST00000180972 426 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
Trim56Q80VI1 Gm27202-201ENSMUST00000183838 512 ntTSL 5 BASIC5.81□□□□□ -1.48
Trim56Q80VI1 Gm4322-201ENSMUST00000191094 336 ntBASIC5.81□□□□□ -1.48
Trim56Q80VI1 Gm38316-201ENSMUST00000194838 469 ntTSL 5 BASIC5.81□□□□□ -1.48
Trim56Q80VI1 Gm42425-201ENSMUST00000197756 565 ntTSL 5 BASIC5.81□□□□□ -1.48
Trim56Q80VI1 Gm43428-201ENSMUST00000200108 3845 ntBASIC5.81□□□□□ -1.48
Trim56Q80VI1 Gm42468-201ENSMUST00000200360 703 ntTSL 3 BASIC5.81□□□□□ -1.48
Trim56Q80VI1 4930518J21Rik-201ENSMUST00000209557 573 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Trim56Q80VI1 Gm31698-202ENSMUST00000214385 527 ntTSL 5 BASIC5.81□□□□□ -1.48
Trim56Q80VI1 AC152946.2-201ENSMUST00000219071 337 ntBASIC5.81□□□□□ -1.48
Trim56Q80VI1 Gm31931-201ENSMUST00000219666 222 ntBASIC5.81□□□□□ -1.48
Trim56Q80VI1 AC122924.2-201ENSMUST00000220799 298 ntBASIC5.81□□□□□ -1.48
Trim56Q80VI1 AC125399.1-201ENSMUST00000224236 595 ntBASIC5.81□□□□□ -1.48
Trim56Q80VI1 CT010506.2-201ENSMUST00000225618 183 ntBASIC5.81□□□□□ -1.48
Trim56Q80VI1 AC132112.1-201ENSMUST00000226354 505 ntBASIC5.81□□□□□ -1.48
Trim56Q80VI1 Vmn1r26-201ENSMUST00000049694 1020 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
Trim56Q80VI1 Gm24037-201ENSMUST00000082871 180 ntBASIC5.81□□□□□ -1.48
Trim56Q80VI1 Prl2b1-201ENSMUST00000091678 891 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
Trim56Q80VI1 Chrnb3-203ENSMUST00000211104 3241 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Trim56Q80VI1 AC124579.1-201ENSMUST00000223468 2520 ntBASIC5.81□□□□□ -1.48
Trim56Q80VI1 Gm7237-201ENSMUST00000148435 1401 ntTSL 5 BASIC5.81□□□□□ -1.48
Trim56Q80VI1 Gm42729-201ENSMUST00000201770 2930 ntBASIC5.81□□□□□ -1.48
Trim56Q80VI1 Fam83b-201ENSMUST00000098546 3136 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Trim56Q80VI1 Akap11-201ENSMUST00000022593 5688 ntAPPRIS ALT2 TSL 5 BASIC5.81□□□□□ -1.48
Trim56Q80VI1 Olfr1389-202ENSMUST00000216641 3707 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
Trim56Q80VI1 Dnah2-202ENSMUST00000108659 13704 ntAPPRIS P2 TSL 5 BASIC5.81□□□□□ -1.48
Trim56Q80VI1 Gm29488-201ENSMUST00000191427 2402 ntBASIC5.8□□□□□ -1.48
Trim56Q80VI1 Rbm41-203ENSMUST00000113007 3691 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Trim56Q80VI1 Ttc33-202ENSMUST00000081640 1583 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Trim56Q80VI1 Ryr3-211ENSMUST00000208290 15468 ntAPPRIS P3 TSL 5 BASIC5.8□□□□□ -1.48
Trim56Q80VI1 Olfr266-202ENSMUST00000213616 2195 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
Trim56Q80VI1 Zfp62-202ENSMUST00000109197 4029 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Trim56Q80VI1 Vmn1r32-202ENSMUST00000227014 2661 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
Trim56Q80VI1 AC117769.3-201ENSMUST00000225814 1664 ntBASIC5.8□□□□□ -1.48
Trim56Q80VI1 Gm16431-201ENSMUST00000117454 431 ntBASIC5.8□□□□□ -1.48
Trim56Q80VI1 Gm15297-201ENSMUST00000117795 290 ntBASIC5.8□□□□□ -1.48
Trim56Q80VI1 Gm11219-201ENSMUST00000118565 358 ntBASIC5.8□□□□□ -1.48
Trim56Q80VI1 Gm11313-201ENSMUST00000118779 432 ntBASIC5.8□□□□□ -1.48
Trim56Q80VI1 Gm15333-201ENSMUST00000118825 364 ntBASIC5.8□□□□□ -1.48
Trim56Q80VI1 Gm6591-201ENSMUST00000121063 434 ntBASIC5.8□□□□□ -1.48
Trim56Q80VI1 Olfr343-ps1-201ENSMUST00000121883 303 ntBASIC5.8□□□□□ -1.48
Trim56Q80VI1 Gm25103-201ENSMUST00000122671 318 ntBASIC5.8□□□□□ -1.48
Trim56Q80VI1 Vmn1r-ps65-201ENSMUST00000174235 951 ntBASIC5.8□□□□□ -1.48
Trim56Q80VI1 Gm21788-201ENSMUST00000177878 543 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
Trim56Q80VI1 Gm17916-202ENSMUST00000187634 1187 ntBASIC5.8□□□□□ -1.48
Trim56Q80VI1 Npn2-202ENSMUST00000189275 235 ntBASIC5.8□□□□□ -1.48
Trim56Q80VI1 Gm44468-201ENSMUST00000199516 105 ntBASIC5.8□□□□□ -1.48
Trim56Q80VI1 Gm5917-201ENSMUST00000217638 721 ntBASIC5.8□□□□□ -1.48
Trim56Q80VI1 Erich6b-201ENSMUST00000022579 869 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Trim56Q80VI1 Magea3-201ENSMUST00000079867 963 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
Trim56Q80VI1 Gm23626-201ENSMUST00000082458 133 ntBASIC5.8□□□□□ -1.48
Trim56Q80VI1 Gm26439-201ENSMUST00000082592 106 ntBASIC5.8□□□□□ -1.48
Trim56Q80VI1 Olfr1167-201ENSMUST00000099832 1100 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
Trim56Q80VI1 Zfp143-201ENSMUST00000084727 3003 ntAPPRIS ALT1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Trim56Q80VI1 Olfr390-204ENSMUST00000215161 3740 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
Trim56Q80VI1 Gm15975-201ENSMUST00000122385 1402 ntBASIC5.8□□□□□ -1.48
Trim56Q80VI1 Olfr427-202ENSMUST00000213832 3866 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
Trim56Q80VI1 Olfr733-204ENSMUST00000216195 3669 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
Trim56Q80VI1 Wdr64-201ENSMUST00000094288 3817 ntAPPRIS P2 TSL 5 BASIC5.8□□□□□ -1.48
Trim56Q80VI1 Gm43209-201ENSMUST00000198949 1588 ntBASIC5.8□□□□□ -1.48
Trim56Q80VI1 Sult2a8-201ENSMUST00000063509 2143 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Trim56Q80VI1 Vmn1r80-206ENSMUST00000228028 6918 ntBASIC5.8□□□□□ -1.48
Trim56Q80VI1 Slc22a30-202ENSMUST00000096269 2255 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Trim56Q80VI1 Cfap61-207ENSMUST00000138774 3308 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Trim56Q80VI1 Mctp1-202ENSMUST00000109589 1653 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Trim56Q80VI1 Olfr1250-203ENSMUST00000215730 4632 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
Trim56Q80VI1 Med13-201ENSMUST00000043624 10546 ntAPPRIS P1 TSL 2 BASIC5.79□□□□□ -1.48
Trim56Q80VI1 Gm11784-201ENSMUST00000118568 474 ntBASIC5.79□□□□□ -1.48
Trim56Q80VI1 Gm14815-201ENSMUST00000120060 488 ntBASIC5.79□□□□□ -1.48
Trim56Q80VI1 Gm15177-201ENSMUST00000120491 577 ntBASIC5.79□□□□□ -1.48
Trim56Q80VI1 Gm13782-201ENSMUST00000149515 352 ntTSL 3 BASIC5.79□□□□□ -1.48
Trim56Q80VI1 Gm24965-201ENSMUST00000157922 106 ntBASIC5.79□□□□□ -1.48
Trim56Q80VI1 Vmn1r-ps25-201ENSMUST00000173545 799 ntBASIC5.79□□□□□ -1.48
Trim56Q80VI1 Gm20711-201ENSMUST00000177351 714 ntTSL 3 BASIC5.79□□□□□ -1.48
Trim56Q80VI1 Olfr1187-ps1-201ENSMUST00000177576 334 ntBASIC5.79□□□□□ -1.48
Trim56Q80VI1 Gm37313-201ENSMUST00000191673 290 ntBASIC5.79□□□□□ -1.48
Trim56Q80VI1 Gm37272-201ENSMUST00000193401 488 ntBASIC5.79□□□□□ -1.48
Trim56Q80VI1 Gm44319-201ENSMUST00000196974 93 ntBASIC5.79□□□□□ -1.48
Trim56Q80VI1 Rps27-206ENSMUST00000197361 329 ntTSL 3 BASIC5.79□□□□□ -1.48
Trim56Q80VI1 Gm43083-201ENSMUST00000199594 476 ntBASIC5.79□□□□□ -1.48
Retrieved 100 of 76,532 protein–RNA pairs in 78.9 ms