Protein–RNA interactions for Protein: Q6IFX4

Krt39, Keratin, type I cytoskeletal 39, mousemouse

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt39Q6IFX4 Gm27033-201ENSMUST00000183226 544 ntBASIC4.28□□□□□ -1.72
Krt39Q6IFX4 Mir6393-201ENSMUST00000183709 94 ntBASIC4.28□□□□□ -1.72
Krt39Q6IFX4 Mir3620-201ENSMUST00000184710 61 ntBASIC4.28□□□□□ -1.72
Krt39Q6IFX4 Mir6715-201ENSMUST00000184990 57 ntBASIC4.28□□□□□ -1.72
Krt39Q6IFX4 1700067G17Rik-201ENSMUST00000186180 603 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
Krt39Q6IFX4 AV026068-206ENSMUST00000187461 513 ntTSL 2 BASIC4.28□□□□□ -1.72
Krt39Q6IFX4 Gm36964-201ENSMUST00000191876 198 ntBASIC4.28□□□□□ -1.72
Krt39Q6IFX4 Olfr241-ps1-201ENSMUST00000197024 633 ntBASIC4.28□□□□□ -1.72
Krt39Q6IFX4 Gm42796-201ENSMUST00000199913 1087 ntBASIC4.28□□□□□ -1.72
Krt39Q6IFX4 Gm42474-201ENSMUST00000201073 505 ntBASIC4.28□□□□□ -1.72
Krt39Q6IFX4 CT025680.1-201ENSMUST00000217375 375 ntBASIC4.28□□□□□ -1.72
Krt39Q6IFX4 Gm31931-201ENSMUST00000219666 222 ntBASIC4.28□□□□□ -1.72
Krt39Q6IFX4 4930455B14Rik-204ENSMUST00000224776 848 ntBASIC4.28□□□□□ -1.72
Krt39Q6IFX4 AC183092.2-201ENSMUST00000225542 1153 ntBASIC4.28□□□□□ -1.72
Krt39Q6IFX4 CT571256.1-201ENSMUST00000226045 585 ntBASIC4.28□□□□□ -1.72
Krt39Q6IFX4 AC102815.1-201ENSMUST00000226662 1061 ntBASIC4.28□□□□□ -1.72
Krt39Q6IFX4 AC131068.1-201ENSMUST00000226891 482 ntBASIC4.28□□□□□ -1.72
Krt39Q6IFX4 AC154467.1-201ENSMUST00000227527 449 ntBASIC4.28□□□□□ -1.72
Krt39Q6IFX4 Gm22043-201ENSMUST00000082993 158 ntBASIC4.28□□□□□ -1.72
Krt39Q6IFX4 Mir30e-201ENSMUST00000083475 92 ntBASIC4.28□□□□□ -1.72
Krt39Q6IFX4 Olfr1278-201ENSMUST00000090330 942 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
Krt39Q6IFX4 2410024N13Rik-201ENSMUST00000090704 669 ntBASIC4.28□□□□□ -1.72
Krt39Q6IFX4 Olfr1290-201ENSMUST00000099616 939 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
Krt39Q6IFX4 Gm44682-201ENSMUST00000208501 2614 ntBASIC4.28□□□□□ -1.72
Krt39Q6IFX4 Vmn1r34-205ENSMUST00000227332 3075 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
Krt39Q6IFX4 Olfr1031-202ENSMUST00000216807 1946 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
Krt39Q6IFX4 Slc22a30-203ENSMUST00000120540 2598 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
Krt39Q6IFX4 Ddx60-201ENSMUST00000070631 6535 ntAPPRIS P2 TSL 5 BASIC4.28□□□□□ -1.72
Krt39Q6IFX4 Gm44800-201ENSMUST00000207510 1855 ntBASIC4.28□□□□□ -1.72
Krt39Q6IFX4 Mga-204ENSMUST00000110774 13931 ntAPPRIS P3 TSL 5 BASIC4.28□□□□□ -1.72
Krt39Q6IFX4 Gm45263-201ENSMUST00000210377 1375 ntBASIC4.27□□□□□ -1.73
Krt39Q6IFX4 Dnah7b-201ENSMUST00000069293 12314 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
Krt39Q6IFX4 Gm8734-201ENSMUST00000211669 1312 ntBASIC4.27□□□□□ -1.73
Krt39Q6IFX4 Hmgb1-203ENSMUST00000110505 1720 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
Krt39Q6IFX4 Dock11-202ENSMUST00000115264 1725 ntTSL 5 BASIC4.27□□□□□ -1.73
Krt39Q6IFX4 Olfr769-202ENSMUST00000215453 4143 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
Krt39Q6IFX4 Gm42993-201ENSMUST00000196856 7325 ntBASIC4.27□□□□□ -1.73
Krt39Q6IFX4 Fam111a-204ENSMUST00000151307 3687 ntAPPRIS ALT2 TSL 5 BASIC4.27□□□□□ -1.73
Krt39Q6IFX4 Mir551b-201ENSMUST00000102165 98 ntBASIC4.27□□□□□ -1.73
Krt39Q6IFX4 Igkv11-106-201ENSMUST00000103331 346 ntBASIC4.27□□□□□ -1.73
Krt39Q6IFX4 Sva-202ENSMUST00000117406 645 ntAPPRIS ALT2 TSL 1 (best) BASIC4.27□□□□□ -1.73
Krt39Q6IFX4 Gm9308-201ENSMUST00000119073 448 ntBASIC4.27□□□□□ -1.73
Krt39Q6IFX4 Gm14352-201ENSMUST00000119250 449 ntBASIC4.27□□□□□ -1.73
Krt39Q6IFX4 Gm11645-201ENSMUST00000121589 649 ntBASIC4.27□□□□□ -1.73
Krt39Q6IFX4 Gm5123-201ENSMUST00000121905 837 ntBASIC4.27□□□□□ -1.73
Krt39Q6IFX4 Gm5755-201ENSMUST00000152394 837 ntBASIC4.27□□□□□ -1.73
Krt39Q6IFX4 Gm11640-201ENSMUST00000155987 272 ntTSL 3 BASIC4.27□□□□□ -1.73
Krt39Q6IFX4 Sult3a2-201ENSMUST00000165904 882 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
Krt39Q6IFX4 Vmn2r-ps73-201ENSMUST00000173890 1194 ntBASIC4.27□□□□□ -1.73
Krt39Q6IFX4 Gm21070-201ENSMUST00000182425 985 ntBASIC4.27□□□□□ -1.73
Krt39Q6IFX4 Scgb2b16-ps-201ENSMUST00000188720 333 ntBASIC4.27□□□□□ -1.73
Krt39Q6IFX4 Gm30280-201ENSMUST00000192214 262 ntBASIC4.27□□□□□ -1.73
Krt39Q6IFX4 Gm42750-201ENSMUST00000199745 353 ntTSL 2 BASIC4.27□□□□□ -1.73
Krt39Q6IFX4 Gm44857-201ENSMUST00000208331 196 ntBASIC4.27□□□□□ -1.73
Krt39Q6IFX4 Gm45551-201ENSMUST00000211459 928 ntBASIC4.27□□□□□ -1.73
Krt39Q6IFX4 Gm45727-201ENSMUST00000212886 572 ntBASIC4.27□□□□□ -1.73
Krt39Q6IFX4 Gm19987-201ENSMUST00000216339 499 ntBASIC4.27□□□□□ -1.73
Krt39Q6IFX4 CT025611.2-201ENSMUST00000220475 879 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
Krt39Q6IFX4 CT009733.1-201ENSMUST00000225322 425 ntBASIC4.27□□□□□ -1.73
Krt39Q6IFX4 AC122448.1-201ENSMUST00000226317 772 ntBASIC4.27□□□□□ -1.73
Krt39Q6IFX4 Vmn1r20-201ENSMUST00000226808 912 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
Krt39Q6IFX4 Znrd1as-201ENSMUST00000040177 976 ntAPPRIS P2 TSL 1 (best) BASIC4.27□□□□□ -1.73
Krt39Q6IFX4 Olfr357-201ENSMUST00000069578 1092 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
Krt39Q6IFX4 Gm24035-201ENSMUST00000082867 107 ntBASIC4.27□□□□□ -1.73
Krt39Q6IFX4 Mir34b-201ENSMUST00000083558 84 ntBASIC4.27□□□□□ -1.73
Krt39Q6IFX4 Srek1-204ENSMUST00000210489 6330 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
Krt39Q6IFX4 Xrn1-202ENSMUST00000185633 10256 ntAPPRIS ALT2 TSL 1 (best) BASIC4.27□□□□□ -1.73
Krt39Q6IFX4 Calcrl-202ENSMUST00000099944 3973 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
Krt39Q6IFX4 Oog1-202ENSMUST00000222112 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC4.27□□□□□ -1.73
Krt39Q6IFX4 Olfr330-202ENSMUST00000213188 2836 ntAPPRIS P1 TSL 2 BASIC4.27□□□□□ -1.73
Krt39Q6IFX4 Olfr133-204ENSMUST00000215549 2944 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
Krt39Q6IFX4 Vmn1r169-205ENSMUST00000228832 2749 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
Krt39Q6IFX4 Gm14172-201ENSMUST00000118255 644 ntBASIC4.26□□□□□ -1.73
Krt39Q6IFX4 Gm11566-201ENSMUST00000118550 203 ntBASIC4.26□□□□□ -1.73
Krt39Q6IFX4 Gm13155-201ENSMUST00000119277 646 ntBASIC4.26□□□□□ -1.73
Krt39Q6IFX4 Gm14605-201ENSMUST00000120599 268 ntBASIC4.26□□□□□ -1.73
Krt39Q6IFX4 Gm13743-201ENSMUST00000121486 724 ntBASIC4.26□□□□□ -1.73
Krt39Q6IFX4 Gm8178-201ENSMUST00000121570 646 ntBASIC4.26□□□□□ -1.73
Krt39Q6IFX4 Klra17-202ENSMUST00000122219 1167 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
Krt39Q6IFX4 Gm22613-201ENSMUST00000122679 292 ntBASIC4.26□□□□□ -1.73
Krt39Q6IFX4 Gm5963-201ENSMUST00000143451 236 ntBASIC4.26□□□□□ -1.73
Krt39Q6IFX4 Gm24976-201ENSMUST00000158972 135 ntBASIC4.26□□□□□ -1.73
Krt39Q6IFX4 Gm3123-201ENSMUST00000163480 480 ntBASIC4.26□□□□□ -1.73
Krt39Q6IFX4 Gm9376-201ENSMUST00000171107 729 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
Krt39Q6IFX4 Zfp456-202ENSMUST00000172266 679 ntTSL 3 BASIC4.26□□□□□ -1.73
Krt39Q6IFX4 Vmn1r-ps58-201ENSMUST00000174460 840 ntBASIC4.26□□□□□ -1.73
Krt39Q6IFX4 Obox4-ps29-201ENSMUST00000175956 1134 ntBASIC4.26□□□□□ -1.73
Krt39Q6IFX4 Vmn2r-ps118-201ENSMUST00000176785 908 ntBASIC4.26□□□□□ -1.73
Krt39Q6IFX4 Gm26915-201ENSMUST00000183080 748 ntBASIC4.26□□□□□ -1.73
Krt39Q6IFX4 Gm27834-201ENSMUST00000183427 125 ntBASIC4.26□□□□□ -1.73
Krt39Q6IFX4 Gm27695-201ENSMUST00000184301 91 ntBASIC4.26□□□□□ -1.73
Krt39Q6IFX4 Gm27952-201ENSMUST00000184748 105 ntBASIC4.26□□□□□ -1.73
Krt39Q6IFX4 Snhg14-204ENSMUST00000185890 756 ntTSL 5 BASIC4.26□□□□□ -1.73
Krt39Q6IFX4 Scgb1b8-ps-201ENSMUST00000189652 249 ntBASIC4.26□□□□□ -1.73
Krt39Q6IFX4 Scgb2b5-ps-201ENSMUST00000190227 270 ntBASIC4.26□□□□□ -1.73
Krt39Q6IFX4 Gm29130-201ENSMUST00000191015 618 ntTSL 5 BASIC4.26□□□□□ -1.73
Krt39Q6IFX4 Gm8790-201ENSMUST00000194108 322 ntBASIC4.26□□□□□ -1.73
Krt39Q6IFX4 Pgk1-ps3-201ENSMUST00000198338 1201 ntBASIC4.26□□□□□ -1.73
Krt39Q6IFX4 Gm18748-201ENSMUST00000198507 622 ntBASIC4.26□□□□□ -1.73
Krt39Q6IFX4 Gm35325-201ENSMUST00000208979 771 ntTSL 2 BASIC4.26□□□□□ -1.73
Retrieved 100 of 76,532 protein–RNA pairs in 80.4 ms