Protein–RNA interactions for Protein: Q69ZI1

Sh3rf1, E3 ubiquitin-protein ligase SH3RF1, mousemouse

Predictions only

Length 892 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf1Q69ZI1 Gm13905-201ENSMUST00000140009 579 ntTSL 3 BASIC5.36□□□□□ -1.55
Sh3rf1Q69ZI1 Gm24289-201ENSMUST00000157629 135 ntBASIC5.36□□□□□ -1.55
Sh3rf1Q69ZI1 Gm23581-201ENSMUST00000158531 63 ntBASIC5.36□□□□□ -1.55
Sh3rf1Q69ZI1 Gm8161-201ENSMUST00000168739 481 ntBASIC5.36□□□□□ -1.55
Sh3rf1Q69ZI1 Mir5624-201ENSMUST00000176635 61 ntBASIC5.36□□□□□ -1.55
Sh3rf1Q69ZI1 Vmn2r-ps8-201ENSMUST00000177088 898 ntBASIC5.36□□□□□ -1.55
Sh3rf1Q69ZI1 Mir6986-201ENSMUST00000184483 58 ntBASIC5.36□□□□□ -1.55
Sh3rf1Q69ZI1 Gm28353-201ENSMUST00000186482 570 ntBASIC5.36□□□□□ -1.55
Sh3rf1Q69ZI1 Gm28533-201ENSMUST00000186741 570 ntBASIC5.36□□□□□ -1.55
Sh3rf1Q69ZI1 Gm28863-201ENSMUST00000186888 431 ntTSL 3 BASIC5.36□□□□□ -1.55
Sh3rf1Q69ZI1 Gm29186-201ENSMUST00000189178 660 ntTSL 2 BASIC5.36□□□□□ -1.55
Sh3rf1Q69ZI1 Gm28075-201ENSMUST00000189179 354 ntTSL 3 BASIC5.36□□□□□ -1.55
Sh3rf1Q69ZI1 Gm28506-201ENSMUST00000189937 150 ntBASIC5.36□□□□□ -1.55
Sh3rf1Q69ZI1 Gm37495-201ENSMUST00000194590 264 ntBASIC5.36□□□□□ -1.55
Sh3rf1Q69ZI1 Gm43078-201ENSMUST00000197222 168 ntBASIC5.36□□□□□ -1.55
Sh3rf1Q69ZI1 Gm43712-201ENSMUST00000198020 291 ntBASIC5.36□□□□□ -1.55
Sh3rf1Q69ZI1 Gm9332-201ENSMUST00000198431 730 ntBASIC5.36□□□□□ -1.55
Sh3rf1Q69ZI1 Gm42814-201ENSMUST00000199370 460 ntBASIC5.36□□□□□ -1.55
Sh3rf1Q69ZI1 Gm43522-202ENSMUST00000200185 442 ntTSL 3 BASIC5.36□□□□□ -1.55
Sh3rf1Q69ZI1 Gm7825-201ENSMUST00000204046 416 ntBASIC5.36□□□□□ -1.55
Sh3rf1Q69ZI1 Zfp813-ps-202ENSMUST00000204773 618 ntTSL 5 BASIC5.36□□□□□ -1.55
Sh3rf1Q69ZI1 Gm31510-202ENSMUST00000206795 239 ntTSL 3 BASIC5.36□□□□□ -1.55
Sh3rf1Q69ZI1 Gm45614-201ENSMUST00000209994 721 ntBASIC5.36□□□□□ -1.55
Sh3rf1Q69ZI1 Gm45494-201ENSMUST00000211167 545 ntTSL 3 BASIC5.36□□□□□ -1.55
Sh3rf1Q69ZI1 Gm36445-205ENSMUST00000211729 1100 ntTSL 5 BASIC5.36□□□□□ -1.55
Sh3rf1Q69ZI1 Olfr6-204ENSMUST00000219365 951 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
Sh3rf1Q69ZI1 Gm40692-201ENSMUST00000220411 491 ntBASIC5.36□□□□□ -1.55
Sh3rf1Q69ZI1 AC140285.1-201ENSMUST00000220472 452 ntTSL 3 BASIC5.36□□□□□ -1.55
Sh3rf1Q69ZI1 Gm6049-201ENSMUST00000222369 458 ntBASIC5.36□□□□□ -1.55
Sh3rf1Q69ZI1 AC125399.1-201ENSMUST00000224236 595 ntBASIC5.36□□□□□ -1.55
Sh3rf1Q69ZI1 AC154788.1-201ENSMUST00000225003 340 ntBASIC5.36□□□□□ -1.55
Sh3rf1Q69ZI1 CT025157.1-201ENSMUST00000226241 292 ntBASIC5.36□□□□□ -1.55
Sh3rf1Q69ZI1 AL607142.1-201ENSMUST00000226560 78 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
Sh3rf1Q69ZI1 Olfr655-201ENSMUST00000057385 927 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
Sh3rf1Q69ZI1 Mir134-201ENSMUST00000083492 71 ntBASIC5.36□□□□□ -1.55
Sh3rf1Q69ZI1 Snhg14-214ENSMUST00000191191 3991 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
Sh3rf1Q69ZI1 Usp25-201ENSMUST00000023580 4412 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
Sh3rf1Q69ZI1 Aadacl2-201ENSMUST00000169794 1590 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
Sh3rf1Q69ZI1 Gm4724-201ENSMUST00000109045 1659 ntAPPRIS P1 TSL 2 BASIC5.36□□□□□ -1.55
Sh3rf1Q69ZI1 Olfr1471-204ENSMUST00000217249 1662 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
Sh3rf1Q69ZI1 Olfr988-202ENSMUST00000111597 1702 ntAPPRIS P1 TSL 3 BASIC5.36□□□□□ -1.55
Sh3rf1Q69ZI1 Gm10933-201ENSMUST00000221891 1861 ntBASIC5.36□□□□□ -1.55
Sh3rf1Q69ZI1 Gm37668-201ENSMUST00000193745 1944 ntBASIC5.36□□□□□ -1.55
Sh3rf1Q69ZI1 Olfr947-ps1-201ENSMUST00000214075 2165 ntAPPRIS P1 TSL 3 BASIC5.36□□□□□ -1.55
Sh3rf1Q69ZI1 Gm43333-201ENSMUST00000198340 2262 ntBASIC5.36□□□□□ -1.55
Sh3rf1Q69ZI1 Ttc37-205ENSMUST00000224386 6976 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
Sh3rf1Q69ZI1 Crebrf-201ENSMUST00000062519 7462 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
Sh3rf1Q69ZI1 Gm4070-202ENSMUST00000176467 9007 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
Sh3rf1Q69ZI1 Gvin1-202ENSMUST00000183409 9005 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
Sh3rf1Q69ZI1 Olfr427-202ENSMUST00000213832 3866 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
Sh3rf1Q69ZI1 Gm37529-201ENSMUST00000195618 4321 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
Sh3rf1Q69ZI1 Gm43437-201ENSMUST00000198535 3955 ntBASIC5.35□□□□□ -1.55
Sh3rf1Q69ZI1 Lrrn3-201ENSMUST00000043884 3865 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
Sh3rf1Q69ZI1 Akr1e1-201ENSMUST00000091848 3463 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
Sh3rf1Q69ZI1 4932411K12Rik-201ENSMUST00000190493 3156 ntTSL 2 BASIC5.35□□□□□ -1.55
Sh3rf1Q69ZI1 Gm43085-201ENSMUST00000202859 3132 ntBASIC5.35□□□□□ -1.55
Sh3rf1Q69ZI1 Olfr721-ps1-203ENSMUST00000215479 3075 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
Sh3rf1Q69ZI1 Olfr1226-203ENSMUST00000215562 2669 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
Sh3rf1Q69ZI1 AC131720.1-201ENSMUST00000218629 2132 ntBASIC5.35□□□□□ -1.55
Sh3rf1Q69ZI1 Ugt2b5-201ENSMUST00000067790 1858 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
Sh3rf1Q69ZI1 Olfr774-202ENSMUST00000203248 1429 ntAPPRIS P1 TSL 3 BASIC5.35□□□□□ -1.55
Sh3rf1Q69ZI1 Defb47-201ENSMUST00000100492 359 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
Sh3rf1Q69ZI1 Mir292-201ENSMUST00000104847 82 ntBASIC5.35□□□□□ -1.55
Sh3rf1Q69ZI1 Gm8595-201ENSMUST00000118250 630 ntBASIC5.35□□□□□ -1.55
Sh3rf1Q69ZI1 Gm7670-201ENSMUST00000121272 641 ntBASIC5.35□□□□□ -1.55
Sh3rf1Q69ZI1 Gm12413-201ENSMUST00000121508 312 ntBASIC5.35□□□□□ -1.55
Sh3rf1Q69ZI1 Tnfaip8-203ENSMUST00000126666 906 ntTSL 2 BASIC5.35□□□□□ -1.55
Sh3rf1Q69ZI1 Gm16208-201ENSMUST00000128476 471 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
Sh3rf1Q69ZI1 Gm14012-201ENSMUST00000136025 677 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
Sh3rf1Q69ZI1 Gm14330-201ENSMUST00000155455 455 ntTSL 5 BASIC5.35□□□□□ -1.55
Sh3rf1Q69ZI1 Gm11507-201ENSMUST00000156462 412 ntBASIC5.35□□□□□ -1.55
Sh3rf1Q69ZI1 Gm24584-201ENSMUST00000157972 107 ntBASIC5.35□□□□□ -1.55
Sh3rf1Q69ZI1 Gm3531-201ENSMUST00000162698 489 ntBASIC5.35□□□□□ -1.55
Sh3rf1Q69ZI1 Olfr753-ps1-202ENSMUST00000174673 919 ntBASIC5.35□□□□□ -1.55
Sh3rf1Q69ZI1 Gm22716-201ENSMUST00000177596 107 ntBASIC5.35□□□□□ -1.55
Sh3rf1Q69ZI1 Gm25194-201ENSMUST00000177987 79 ntBASIC5.35□□□□□ -1.55
Sh3rf1Q69ZI1 Gm13698-201ENSMUST00000178325 732 ntTSL 5 BASIC5.35□□□□□ -1.55
Sh3rf1Q69ZI1 Gm13694-202ENSMUST00000178655 732 ntTSL 5 BASIC5.35□□□□□ -1.55
Sh3rf1Q69ZI1 Gm13696-201ENSMUST00000179311 732 ntTSL 5 BASIC5.35□□□□□ -1.55
Sh3rf1Q69ZI1 Gm13693-202ENSMUST00000179448 732 ntTSL 5 BASIC5.35□□□□□ -1.55
Sh3rf1Q69ZI1 Gm13695-202ENSMUST00000179504 732 ntTSL 5 BASIC5.35□□□□□ -1.55
Sh3rf1Q69ZI1 Gm13697-202ENSMUST00000179552 732 ntTSL 5 BASIC5.35□□□□□ -1.55
Sh3rf1Q69ZI1 Gm22286-201ENSMUST00000179708 107 ntBASIC5.35□□□□□ -1.55
Sh3rf1Q69ZI1 Gm25939-201ENSMUST00000179876 191 ntBASIC5.35□□□□□ -1.55
Sh3rf1Q69ZI1 Trav12-2-201ENSMUST00000180972 426 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
Sh3rf1Q69ZI1 Gm8649-201ENSMUST00000181799 233 ntBASIC5.35□□□□□ -1.55
Sh3rf1Q69ZI1 Mir7087-201ENSMUST00000184840 70 ntBASIC5.35□□□□□ -1.55
Sh3rf1Q69ZI1 Gm6543-201ENSMUST00000197353 808 ntBASIC5.35□□□□□ -1.55
Sh3rf1Q69ZI1 Gm18482-201ENSMUST00000202405 760 ntBASIC5.35□□□□□ -1.55
Sh3rf1Q69ZI1 Gm8719-201ENSMUST00000203602 534 ntBASIC5.35□□□□□ -1.55
Sh3rf1Q69ZI1 Gm18924-201ENSMUST00000211929 316 ntBASIC5.35□□□□□ -1.55
Sh3rf1Q69ZI1 Gm21112-201ENSMUST00000212224 578 ntBASIC5.35□□□□□ -1.55
Sh3rf1Q69ZI1 AC156950.1-201ENSMUST00000219604 456 ntBASIC5.35□□□□□ -1.55
Sh3rf1Q69ZI1 AC159244.1-201ENSMUST00000220964 594 ntBASIC5.35□□□□□ -1.55
Sh3rf1Q69ZI1 Glod5-201ENSMUST00000033503 673 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
Sh3rf1Q69ZI1 Gm23623-201ENSMUST00000082461 107 ntBASIC5.35□□□□□ -1.55
Sh3rf1Q69ZI1 Gm22749-201ENSMUST00000082490 107 ntBASIC5.35□□□□□ -1.55
Sh3rf1Q69ZI1 Gm24856-201ENSMUST00000082809 107 ntBASIC5.35□□□□□ -1.55
Sh3rf1Q69ZI1 Gm25258-201ENSMUST00000083049 107 ntBASIC5.35□□□□□ -1.55
Sh3rf1Q69ZI1 Gm24535-201ENSMUST00000083140 107 ntBASIC5.35□□□□□ -1.55
Retrieved 100 of 76,532 protein–RNA pairs in 80.5 ms