Protein–RNA interactions for Protein: Q60847

Col12a1, Collagen alpha-1(XII) chain, mousemouse

Predictions only

Length 3,120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col12a1Q60847 Gm21693-201ENSMUST00000178531 1143 ntAPPRIS P1 TSL 5 BASIC3.03□□□□□ -1.92
Col12a1Q60847 Gm21677-201ENSMUST00000179508 1143 ntAPPRIS P1 TSL 5 BASIC3.03□□□□□ -1.92
Col12a1Q60847 Gm3376-201ENSMUST00000180202 1143 ntAPPRIS P1 TSL 5 BASIC3.03□□□□□ -1.92
Col12a1Q60847 Gm21708-201ENSMUST00000180310 1143 ntAPPRIS P1 TSL 5 BASIC3.03□□□□□ -1.92
Col12a1Q60847 1700025F22Rik-202ENSMUST00000180678 658 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
Col12a1Q60847 Gm36551-201ENSMUST00000196787 300 ntTSL 5 BASIC3.03□□□□□ -1.92
Col12a1Q60847 Gm7422-201ENSMUST00000220115 640 ntBASIC3.03□□□□□ -1.92
Col12a1Q60847 AC122924.1-201ENSMUST00000222044 163 ntBASIC3.03□□□□□ -1.92
Col12a1Q60847 Olfr725-201ENSMUST00000089844 1110 ntAPPRIS P1 BASIC3.03□□□□□ -1.92
Col12a1Q60847 Gm12586-201ENSMUST00000117328 1316 ntBASIC3.03□□□□□ -1.92
Col12a1Q60847 Olfr491-202ENSMUST00000209545 1944 ntAPPRIS P1 TSL 5 BASIC3.03□□□□□ -1.92
Col12a1Q60847 Gm12568-201ENSMUST00000117362 624 ntBASIC3.02□□□□□ -1.93
Col12a1Q60847 Hmgb1-ps2-201ENSMUST00000117548 636 ntBASIC3.02□□□□□ -1.93
Col12a1Q60847 Gm13379-201ENSMUST00000118053 621 ntBASIC3.02□□□□□ -1.93
Col12a1Q60847 Hmgb1-ps4-201ENSMUST00000118281 635 ntBASIC3.02□□□□□ -1.93
Col12a1Q60847 Hmgb1-ps3-201ENSMUST00000118415 636 ntBASIC3.02□□□□□ -1.93
Col12a1Q60847 Rpl30-ps9-201ENSMUST00000122265 345 ntBASIC3.02□□□□□ -1.93
Col12a1Q60847 Prl2c5-202ENSMUST00000126540 971 ntAPPRIS ALT2 TSL 1 (best) BASIC3.02□□□□□ -1.93
Col12a1Q60847 Gm22600-201ENSMUST00000157598 269 ntBASIC3.02□□□□□ -1.93
Col12a1Q60847 Gm24402-201ENSMUST00000157873 91 ntBASIC3.02□□□□□ -1.93
Col12a1Q60847 Gm10075-201ENSMUST00000162030 545 ntBASIC3.02□□□□□ -1.93
Col12a1Q60847 Hmgb1-ps9-201ENSMUST00000179479 645 ntBASIC3.02□□□□□ -1.93
Col12a1Q60847 Gm5527-201ENSMUST00000179821 642 ntBASIC3.02□□□□□ -1.93
Col12a1Q60847 Gm35667-201ENSMUST00000199122 711 ntTSL 5 BASIC3.02□□□□□ -1.93
Col12a1Q60847 Gm8319-201ENSMUST00000205708 641 ntBASIC3.02□□□□□ -1.93
Col12a1Q60847 AC155305.1-201ENSMUST00000222207 319 ntBASIC3.02□□□□□ -1.93
Col12a1Q60847 Etd-201ENSMUST00000074232 478 ntAPPRIS P1 TSL 2 BASIC3.02□□□□□ -1.93
Col12a1Q60847 Vmn2r107-201ENSMUST00000042090 2586 ntAPPRIS P1 TSL 5 BASIC3.02□□□□□ -1.93
Col12a1Q60847 Gm13088-201ENSMUST00000105771 1819 ntAPPRIS P1 TSL 5 BASIC3.02□□□□□ -1.93
Col12a1Q60847 Nfat5-202ENSMUST00000077440 12773 ntAPPRIS ALT2 TSL 5 BASIC3.02□□□□□ -1.93
Col12a1Q60847 Gm15361-201ENSMUST00000119320 444 ntBASIC3.02□□□□□ -1.93
Col12a1Q60847 Mir5123-201ENSMUST00000177794 83 ntBASIC3.02□□□□□ -1.93
Col12a1Q60847 Gm19124-201ENSMUST00000191041 832 ntBASIC3.02□□□□□ -1.93
Col12a1Q60847 Gm43685-201ENSMUST00000198876 706 ntTSL 3 BASIC3.02□□□□□ -1.93
Col12a1Q60847 Gm43812-201ENSMUST00000200976 581 ntTSL 5 BASIC3.02□□□□□ -1.93
Col12a1Q60847 Gm44212-201ENSMUST00000205016 897 ntBASIC3.02□□□□□ -1.93
Col12a1Q60847 1700061N14Rik-201ENSMUST00000212295 463 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
Col12a1Q60847 Gm26494-201ENSMUST00000083154 143 ntBASIC3.02□□□□□ -1.93
Col12a1Q60847 Gm24493-201ENSMUST00000083805 143 ntBASIC3.02□□□□□ -1.93
Col12a1Q60847 Epgn-201ENSMUST00000041516 1760 ntAPPRIS P2 TSL 1 (best) BASIC3.02□□□□□ -1.93
Col12a1Q60847 Gm36931-201ENSMUST00000192997 4801 ntBASIC3.02□□□□□ -1.93
Col12a1Q60847 Rbms3-206ENSMUST00000111773 7908 ntAPPRIS ALT2 TSL 1 (best) BASIC3.02□□□□□ -1.93
Col12a1Q60847 Enam-202ENSMUST00000199104 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC3.02□□□□□ -1.93
Col12a1Q60847 Trav14d-2-201ENSMUST00000103597 276 ntAPPRIS P1 BASIC3.02□□□□□ -1.93
Col12a1Q60847 Trav14n-2-201ENSMUST00000103623 276 ntAPPRIS P1 BASIC3.02□□□□□ -1.93
Col12a1Q60847 Gm14821-201ENSMUST00000121975 435 ntBASIC3.02□□□□□ -1.93
Col12a1Q60847 Mir7669-201ENSMUST00000183442 58 ntBASIC3.02□□□□□ -1.93
Col12a1Q60847 Trav14-2-202ENSMUST00000184874 276 ntAPPRIS P1 BASIC3.02□□□□□ -1.93
Col12a1Q60847 Gm5368-201ENSMUST00000189012 589 ntBASIC3.02□□□□□ -1.93
Col12a1Q60847 Gm28492-201ENSMUST00000190899 1019 ntBASIC3.02□□□□□ -1.93
Col12a1Q60847 Gm18433-202ENSMUST00000195682 196 ntBASIC3.02□□□□□ -1.93
Col12a1Q60847 Trdn-202ENSMUST00000217779 1182 ntAPPRIS ALT2 TSL 1 (best) BASIC3.02□□□□□ -1.93
Col12a1Q60847 Slc22a30-203ENSMUST00000120540 2598 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
Col12a1Q60847 Abca16-202ENSMUST00000120490 5088 ntAPPRIS P5 TSL 5 BASIC3.01□□□□□ -1.93
Col12a1Q60847 Olfr59-204ENSMUST00000214048 3363 ntAPPRIS P1 TSL 2 BASIC3.01□□□□□ -1.93
Col12a1Q60847 Gm26767-201ENSMUST00000180936 4476 ntTSL 5 BASIC3.01□□□□□ -1.93
Col12a1Q60847 Gm3636-202ENSMUST00000163850 1746 ntAPPRIS ALT2 TSL 5 BASIC3.01□□□□□ -1.93
Col12a1Q60847 Olfr535-207ENSMUST00000217235 5186 ntAPPRIS P1 TSL 5 BASIC3.01□□□□□ -1.93
Col12a1Q60847 Gm15022-201ENSMUST00000122074 746 ntBASIC3.01□□□□□ -1.93
Col12a1Q60847 Tnfaip8-206ENSMUST00000145726 632 ntTSL 3 BASIC3.01□□□□□ -1.93
Col12a1Q60847 Gm25153-201ENSMUST00000157118 156 ntBASIC3.01□□□□□ -1.93
Col12a1Q60847 Gm19104-201ENSMUST00000198392 679 ntBASIC3.01□□□□□ -1.93
Col12a1Q60847 Gm7439-201ENSMUST00000214053 835 ntBASIC3.01□□□□□ -1.93
Col12a1Q60847 Mir410-201ENSMUST00000083563 81 ntBASIC3.01□□□□□ -1.93
Col12a1Q60847 Olfr1104-201ENSMUST00000099869 933 ntAPPRIS P1 BASIC3.01□□□□□ -1.93
Col12a1Q60847 Dlx6os1-201ENSMUST00000159568 4608 ntTSL 5 BASIC3.01□□□□□ -1.93
Col12a1Q60847 Akap6-201ENSMUST00000095737 14847 ntAPPRIS P2 TSL 1 (best) BASIC3.01□□□□□ -1.93
Col12a1Q60847 Olfr211-202ENSMUST00000203700 4880 ntAPPRIS P1 TSL 2 BASIC3.01□□□□□ -1.93
Col12a1Q60847 Gm6982-201ENSMUST00000118752 1560 ntBASIC3.01□□□□□ -1.93
Col12a1Q60847 Cep290-201ENSMUST00000164751 8006 ntAPPRIS P1 TSL 5 BASIC3.01□□□□□ -1.93
Col12a1Q60847 AC091683.1-201ENSMUST00000222307 2446 ntBASIC3.01□□□□□ -1.93
Col12a1Q60847 Catsper4-202ENSMUST00000105878 632 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
Col12a1Q60847 Gm13433-201ENSMUST00000121701 240 ntBASIC3.01□□□□□ -1.93
Col12a1Q60847 Gm18585-201ENSMUST00000215197 556 ntBASIC3.01□□□□□ -1.93
Col12a1Q60847 AC160984.2-201ENSMUST00000224927 791 ntBASIC3.01□□□□□ -1.93
Col12a1Q60847 Olfr1462-201ENSMUST00000076832 924 ntAPPRIS P1 BASIC3.01□□□□□ -1.93
Col12a1Q60847 Frmpd3-201ENSMUST00000044702 3141 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
Col12a1Q60847 Atp1b4-202ENSMUST00000115134 4189 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
Col12a1Q60847 Olfr231-202ENSMUST00000214446 5204 ntAPPRIS P1 TSL 5 BASIC3□□□□□ -1.93
Col12a1Q60847 Olfr653-202ENSMUST00000215585 4765 ntAPPRIS P1 TSL 5 BASIC3□□□□□ -1.93
Col12a1Q60847 Vmn2r81-201ENSMUST00000020547 3276 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
Col12a1Q60847 Olfr1231-202ENSMUST00000216144 3961 ntAPPRIS P1 TSL 3 BASIC3□□□□□ -1.93
Col12a1Q60847 Vmn1r83-202ENSMUST00000226701 2788 ntAPPRIS P1 BASIC3□□□□□ -1.93
Col12a1Q60847 Gm12723-201ENSMUST00000120700 451 ntBASIC3□□□□□ -1.93
Col12a1Q60847 Gm15786-201ENSMUST00000121079 450 ntBASIC3□□□□□ -1.93
Col12a1Q60847 Sult2a-ps4-201ENSMUST00000121421 386 ntBASIC3□□□□□ -1.93
Col12a1Q60847 Trav6-3-202ENSMUST00000183604 305 ntAPPRIS P1 BASIC3□□□□□ -1.93
Col12a1Q60847 Trav6d-3-202ENSMUST00000184883 308 ntAPPRIS P1 BASIC3□□□□□ -1.93
Col12a1Q60847 Gm29148-201ENSMUST00000188140 336 ntBASIC3□□□□□ -1.93
Col12a1Q60847 Gm42457-201ENSMUST00000197572 367 ntTSL 2 BASIC3□□□□□ -1.93
Col12a1Q60847 AC133498.1-206ENSMUST00000223254 385 ntTSL 5 BASIC3□□□□□ -1.93
Col12a1Q60847 Gm28362-201ENSMUST00000189430 2420 ntBASIC3□□□□□ -1.93
Col12a1Q60847 Gm43696-201ENSMUST00000199385 6071 ntBASIC3□□□□□ -1.93
Col12a1Q60847 Olfr1301-202ENSMUST00000207590 4820 ntAPPRIS P1 TSL 2 BASIC3□□□□□ -1.93
Col12a1Q60847 Gm23322-201ENSMUST00000104464 167 ntBASIC3□□□□□ -1.93
Col12a1Q60847 Gm37989-201ENSMUST00000195202 803 ntBASIC3□□□□□ -1.93
Col12a1Q60847 Gm42919-201ENSMUST00000197753 1284 ntBASIC3□□□□□ -1.93
Col12a1Q60847 Kap-202ENSMUST00000203168 464 ntAPPRIS ALT2 TSL 3 BASIC3□□□□□ -1.93
Col12a1Q60847 Gm18423-201ENSMUST00000205144 1074 ntBASIC3□□□□□ -1.93
Col12a1Q60847 Gm45600-201ENSMUST00000210828 234 ntTSL 5 BASIC3□□□□□ -1.93
Retrieved 100 of 76,532 protein–RNA pairs in 77.4 ms