Protein–RNA interactions for Protein: Q5NCC3

Trim41, E3 ubiquitin-protein ligase TRIM41, mousemouse

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim41Q5NCC3 Gm21572-201ENSMUST00000180134 498 ntBASIC9.6□□□□□ -0.87
Trim41Q5NCC3 Gm21529-201ENSMUST00000180175 498 ntBASIC9.6□□□□□ -0.87
Trim41Q5NCC3 Mir6363-201ENSMUST00000184880 114 ntBASIC9.6□□□□□ -0.87
Trim41Q5NCC3 Gm29370-202ENSMUST00000187476 499 ntBASIC9.6□□□□□ -0.87
Trim41Q5NCC3 Gm37416-201ENSMUST00000193596 318 ntBASIC9.6□□□□□ -0.87
Trim41Q5NCC3 CT025665.1-201ENSMUST00000215251 1199 ntBASIC9.6□□□□□ -0.87
Trim41Q5NCC3 AC125531.1-201ENSMUST00000219849 221 ntBASIC9.6□□□□□ -0.87
Trim41Q5NCC3 AC122367.2-201ENSMUST00000220987 534 ntTSL 2 BASIC9.6□□□□□ -0.87
Trim41Q5NCC3 CT010486.1-201ENSMUST00000224609 422 ntBASIC9.6□□□□□ -0.87
Trim41Q5NCC3 Olfr308-201ENSMUST00000044256 1056 ntAPPRIS P1 BASIC9.6□□□□□ -0.87
Trim41Q5NCC3 Gm2710-201ENSMUST00000073196 603 ntBASIC9.6□□□□□ -0.87
Trim41Q5NCC3 Gm26329-201ENSMUST00000093723 110 ntBASIC9.6□□□□□ -0.87
Trim41Q5NCC3 Gm43469-201ENSMUST00000196084 4634 ntBASIC9.6□□□□□ -0.87
Trim41Q5NCC3 Arhgap12-202ENSMUST00000077128 4431 ntAPPRIS ALT2 TSL 1 (best) BASIC9.6□□□□□ -0.87
Trim41Q5NCC3 Mdm4-ps-201ENSMUST00000121299 6514 ntBASIC9.6□□□□□ -0.87
Trim41Q5NCC3 Anapc10-201ENSMUST00000048147 2801 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Trim41Q5NCC3 Cpb2-201ENSMUST00000022576 1477 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Trim41Q5NCC3 AC158982.1-205ENSMUST00000227339 1876 ntBASIC9.59□□□□□ -0.87
Trim41Q5NCC3 Usp47-202ENSMUST00000210309 5816 ntAPPRIS ALT2 TSL 1 (best) BASIC9.59□□□□□ -0.87
Trim41Q5NCC3 Zbed6-201ENSMUST00000190574 5007 ntAPPRIS P1 BASIC9.59□□□□□ -0.87
Trim41Q5NCC3 F630028O10Rik-201ENSMUST00000133125 2771 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Trim41Q5NCC3 Zbbx-203ENSMUST00000107776 1978 ntAPPRIS ALT2 TSL 5 BASIC9.59□□□□□ -0.87
Trim41Q5NCC3 Gm16513-202ENSMUST00000201663 2485 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Trim41Q5NCC3 Rc3h2-202ENSMUST00000112934 8948 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Trim41Q5NCC3 Olfr813-202ENSMUST00000204622 2410 ntAPPRIS P1 TSL 5 BASIC9.59□□□□□ -0.87
Trim41Q5NCC3 Smpx-202ENSMUST00000112520 503 ntAPPRIS P1 TSL 5 BASIC9.59□□□□□ -0.87
Trim41Q5NCC3 Gm12255-201ENSMUST00000117184 284 ntBASIC9.59□□□□□ -0.87
Trim41Q5NCC3 Gm5757-201ENSMUST00000117494 528 ntBASIC9.59□□□□□ -0.87
Trim41Q5NCC3 Vmn1r-ps68-201ENSMUST00000174638 399 ntBASIC9.59□□□□□ -0.87
Trim41Q5NCC3 Gm24819-201ENSMUST00000175094 166 ntBASIC9.59□□□□□ -0.87
Trim41Q5NCC3 Gm24167-201ENSMUST00000177733 124 ntBASIC9.59□□□□□ -0.87
Trim41Q5NCC3 Gm24028-201ENSMUST00000178991 124 ntBASIC9.59□□□□□ -0.87
Trim41Q5NCC3 Gm27521-201ENSMUST00000184022 64 ntBASIC9.59□□□□□ -0.87
Trim41Q5NCC3 Gm37459-202ENSMUST00000195007 563 ntTSL 3 BASIC9.59□□□□□ -0.87
Trim41Q5NCC3 AC160031.2-201ENSMUST00000218242 274 ntBASIC9.59□□□□□ -0.87
Trim41Q5NCC3 Cycs-ps3-201ENSMUST00000223240 321 ntBASIC9.59□□□□□ -0.87
Trim41Q5NCC3 Rnase12-202ENSMUST00000227764 673 ntAPPRIS P1 BASIC9.59□□□□□ -0.87
Trim41Q5NCC3 Bcl2l15-201ENSMUST00000062945 833 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Trim41Q5NCC3 Gm22740-201ENSMUST00000083439 109 ntBASIC9.59□□□□□ -0.87
Trim41Q5NCC3 Rnase12-201ENSMUST00000089798 545 ntAPPRIS P1 BASIC9.59□□□□□ -0.87
Trim41Q5NCC3 Gm20789-201ENSMUST00000221002 4195 ntBASIC9.59□□□□□ -0.87
Trim41Q5NCC3 Tlr4-201ENSMUST00000048096 4077 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Trim41Q5NCC3 A230107N01Rik-201ENSMUST00000180894 2348 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Trim41Q5NCC3 Ipo5-201ENSMUST00000032898 4518 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Trim41Q5NCC3 Plcb4-202ENSMUST00000110109 5217 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.88
Trim41Q5NCC3 Kif18a-201ENSMUST00000028527 3369 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Trim41Q5NCC3 AC154755.2-201ENSMUST00000224384 2857 ntBASIC9.58□□□□□ -0.88
Trim41Q5NCC3 Olfr535-204ENSMUST00000214296 5120 ntAPPRIS P1 TSL 5 BASIC9.58□□□□□ -0.88
Trim41Q5NCC3 Scn2a-202ENSMUST00000100067 8690 ntAPPRIS P3 TSL 5 BASIC9.58□□□□□ -0.88
Trim41Q5NCC3 Gm42781-201ENSMUST00000201317 2719 ntBASIC9.58□□□□□ -0.88
Trim41Q5NCC3 Gm13977-201ENSMUST00000133648 4049 ntTSL 5 BASIC9.58□□□□□ -0.88
Trim41Q5NCC3 Gm37180-201ENSMUST00000195335 2819 ntBASIC9.58□□□□□ -0.88
Trim41Q5NCC3 Gm38190-201ENSMUST00000192350 4755 ntBASIC9.58□□□□□ -0.88
Trim41Q5NCC3 Gm15097-202ENSMUST00000112741 1953 ntAPPRIS ALT2 TSL 5 BASIC9.58□□□□□ -0.88
Trim41Q5NCC3 Gm9700-201ENSMUST00000193786 1617 ntBASIC9.58□□□□□ -0.88
Trim41Q5NCC3 Gm15526-201ENSMUST00000112504 204 ntBASIC9.58□□□□□ -0.88
Trim41Q5NCC3 Gm11975-201ENSMUST00000118772 481 ntBASIC9.58□□□□□ -0.88
Trim41Q5NCC3 2210418O10Rik-202ENSMUST00000135430 195 ntTSL 5 BASIC9.58□□□□□ -0.88
Trim41Q5NCC3 Gm23411-201ENSMUST00000157988 62 ntBASIC9.58□□□□□ -0.88
Trim41Q5NCC3 Gm25333-201ENSMUST00000158035 246 ntBASIC9.58□□□□□ -0.88
Trim41Q5NCC3 Gm32033-201ENSMUST00000193483 339 ntBASIC9.58□□□□□ -0.88
Trim41Q5NCC3 Gm43651-201ENSMUST00000199796 439 ntBASIC9.58□□□□□ -0.88
Trim41Q5NCC3 AC160931.2-201ENSMUST00000221445 351 ntBASIC9.58□□□□□ -0.88
Trim41Q5NCC3 AC154840.1-201ENSMUST00000225216 408 ntBASIC9.58□□□□□ -0.88
Trim41Q5NCC3 Anapc13-201ENSMUST00000038673 411 ntAPPRIS P1 TSL 5 BASIC9.58□□□□□ -0.88
Trim41Q5NCC3 Rpl21-ps13-201ENSMUST00000072532 483 ntBASIC9.58□□□□□ -0.88
Trim41Q5NCC3 Gm10719-202ENSMUST00000099049 675 ntAPPRIS ALT2 TSL 5 BASIC9.58□□□□□ -0.88
Trim41Q5NCC3 Gm10720-201ENSMUST00000099050 669 ntAPPRIS P1 TSL 5 BASIC9.58□□□□□ -0.88
Trim41Q5NCC3 Olfr1249-201ENSMUST00000099769 957 ntAPPRIS P1 BASIC9.58□□□□□ -0.88
Trim41Q5NCC3 Atad2-208ENSMUST00000228783 3472 ntAPPRIS ALT2 BASIC9.58□□□□□ -0.88
Trim41Q5NCC3 Vmn1r84-202ENSMUST00000226408 2898 ntAPPRIS ALT2 BASIC9.58□□□□□ -0.88
Trim41Q5NCC3 Mcf2-201ENSMUST00000033478 3659 ntAPPRIS ALT2 TSL 1 (best) BASIC9.58□□□□□ -0.88
Trim41Q5NCC3 Pramef25-201ENSMUST00000105766 1684 ntAPPRIS P1 TSL 5 BASIC9.58□□□□□ -0.88
Trim41Q5NCC3 Gm6866-202ENSMUST00000206653 3081 ntTSL 5 BASIC9.57□□□□□ -0.88
Trim41Q5NCC3 Olfr629-202ENSMUST00000213906 2548 ntAPPRIS P1 TSL 5 BASIC9.57□□□□□ -0.88
Trim41Q5NCC3 C230099D08Rik-201ENSMUST00000215772 2727 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Trim41Q5NCC3 Olfr477-202ENSMUST00000214677 2930 ntAPPRIS P1 TSL 5 BASIC9.57□□□□□ -0.88
Trim41Q5NCC3 Slfn8-206ENSMUST00000215239 2930 ntTSL 5 BASIC9.57□□□□□ -0.88
Trim41Q5NCC3 Naip2-201ENSMUST00000067975 4709 ntAPPRIS P2 TSL 1 (best) BASIC9.57□□□□□ -0.88
Trim41Q5NCC3 Olfr829-202ENSMUST00000212229 2590 ntAPPRIS ALT2 TSL 5 BASIC9.57□□□□□ -0.88
Trim41Q5NCC3 Iqch-203ENSMUST00000163624 3339 ntAPPRIS ALT2 TSL 1 (best) BASIC9.57□□□□□ -0.88
Trim41Q5NCC3 Vmn1r90-209ENSMUST00000227855 7362 ntAPPRIS P2 BASIC9.57□□□□□ -0.88
Trim41Q5NCC3 S100pbp-201ENSMUST00000049081 2769 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Trim41Q5NCC3 Gm23193-201ENSMUST00000102427 82 ntBASIC9.57□□□□□ -0.88
Trim41Q5NCC3 Swi5-204ENSMUST00000113400 522 ntAPPRIS ALT2 TSL 1 (best) BASIC9.57□□□□□ -0.88
Trim41Q5NCC3 Rpl23a-ps6-201ENSMUST00000119466 468 ntBASIC9.57□□□□□ -0.88
Trim41Q5NCC3 Gm14845-201ENSMUST00000121259 306 ntBASIC9.57□□□□□ -0.88
Trim41Q5NCC3 Gm24439-201ENSMUST00000157894 117 ntBASIC9.57□□□□□ -0.88
Trim41Q5NCC3 Gm22307-201ENSMUST00000180019 107 ntBASIC9.57□□□□□ -0.88
Trim41Q5NCC3 Sbp-205ENSMUST00000183017 700 ntTSL 5 BASIC9.57□□□□□ -0.88
Trim41Q5NCC3 Gm27541-201ENSMUST00000184078 122 ntBASIC9.57□□□□□ -0.88
Trim41Q5NCC3 Gm44009-201ENSMUST00000203539 521 ntTSL 5 BASIC9.57□□□□□ -0.88
Trim41Q5NCC3 Gm19790-201ENSMUST00000214414 251 ntBASIC9.57□□□□□ -0.88
Trim41Q5NCC3 AC154623.1-201ENSMUST00000224348 805 ntBASIC9.57□□□□□ -0.88
Trim41Q5NCC3 AC126275.2-201ENSMUST00000225224 253 ntBASIC9.57□□□□□ -0.88
Trim41Q5NCC3 Olfr738-203ENSMUST00000214853 2046 ntAPPRIS P1 TSL 5 BASIC9.56□□□□□ -0.88
Trim41Q5NCC3 Nlrp4g-201ENSMUST00000067621 2030 ntBASIC9.56□□□□□ -0.88
Trim41Q5NCC3 Olfr328-204ENSMUST00000216725 2904 ntAPPRIS P1 TSL 5 BASIC9.56□□□□□ -0.88
Trim41Q5NCC3 Nfatc3-206ENSMUST00000212742 3207 ntAPPRIS ALT2 TSL 1 (best) BASIC9.56□□□□□ -0.88
Trim41Q5NCC3 Olfr701-203ENSMUST00000217739 4100 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Retrieved 100 of 76,532 protein–RNA pairs in 119.8 ms