Protein–RNA interactions for Protein: Q4VGL6

Rc3h1, Roquin-1, mousemouse

Known RBP Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rc3h1Q4VGL6 Snora23-201ENSMUST00000082517 184 ntBASIC6.33□□□□□ -1.4
Rc3h1Q4VGL6 Gm25187-201ENSMUST00000083906 133 ntBASIC6.33□□□□□ -1.4
Rc3h1Q4VGL6 Defa5-201ENSMUST00000098892 376 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Rc3h1Q4VGL6 Gm5796-201ENSMUST00000096184 1817 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Rc3h1Q4VGL6 Zfp638-220ENSMUST00000204751 9033 ntAPPRIS P3 TSL 1 (best) BASIC6.33□□□□□ -1.4
Rc3h1Q4VGL6 Nlrp4g-201ENSMUST00000067621 2030 ntBASIC6.33□□□□□ -1.4
Rc3h1Q4VGL6 Vmn1r66-203ENSMUST00000227719 2765 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
Rc3h1Q4VGL6 Gm37064-201ENSMUST00000193851 2231 ntBASIC6.33□□□□□ -1.4
Rc3h1Q4VGL6 Asxl3-202ENSMUST00000120223 11485 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
Rc3h1Q4VGL6 4732416N19Rik-201ENSMUST00000203932 3479 ntBASIC6.33□□□□□ -1.4
Rc3h1Q4VGL6 Gm13544-201ENSMUST00000131189 2940 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Rc3h1Q4VGL6 Gm26691-202ENSMUST00000181952 4183 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Rc3h1Q4VGL6 Tdrd3-203ENSMUST00000169504 5280 ntAPPRIS ALT2 TSL 1 (best) BASIC6.32□□□□□ -1.4
Rc3h1Q4VGL6 Gm3962-201ENSMUST00000173027 2587 ntBASIC6.32□□□□□ -1.4
Rc3h1Q4VGL6 Gm38065-201ENSMUST00000193147 3492 ntBASIC6.32□□□□□ -1.4
Rc3h1Q4VGL6 Usp29-203ENSMUST00000198068 4420 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
Rc3h1Q4VGL6 Vmn1r6-202ENSMUST00000226689 8453 ntAPPRIS P2 BASIC6.32□□□□□ -1.4
Rc3h1Q4VGL6 Agbl2-204ENSMUST00000111481 3448 ntAPPRIS P2 TSL 5 BASIC6.32□□□□□ -1.4
Rc3h1Q4VGL6 Gm15084-201ENSMUST00000178585 1502 ntBASIC6.32□□□□□ -1.4
Rc3h1Q4VGL6 Chrna6-201ENSMUST00000033882 2906 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Rc3h1Q4VGL6 Gm14838-201ENSMUST00000118913 248 ntBASIC6.32□□□□□ -1.4
Rc3h1Q4VGL6 Gm15803-201ENSMUST00000120118 394 ntBASIC6.32□□□□□ -1.4
Rc3h1Q4VGL6 A630023P12Rik-204ENSMUST00000142879 524 ntTSL 3 BASIC6.32□□□□□ -1.4
Rc3h1Q4VGL6 Gm13467-201ENSMUST00000145568 281 ntTSL 5 BASIC6.32□□□□□ -1.4
Rc3h1Q4VGL6 Scarna6-201ENSMUST00000158656 265 ntBASIC6.32□□□□□ -1.4
Rc3h1Q4VGL6 Gm20397-201ENSMUST00000174520 362 ntBASIC6.32□□□□□ -1.4
Rc3h1Q4VGL6 Mir5103-201ENSMUST00000175111 79 ntBASIC6.32□□□□□ -1.4
Rc3h1Q4VGL6 Gm11395-201ENSMUST00000181011 499 ntBASIC6.32□□□□□ -1.4
Rc3h1Q4VGL6 Gm11394-201ENSMUST00000181421 517 ntBASIC6.32□□□□□ -1.4
Rc3h1Q4VGL6 Mir6343-201ENSMUST00000183584 84 ntBASIC6.32□□□□□ -1.4
Rc3h1Q4VGL6 Topbp1-ps2-201ENSMUST00000191289 189 ntBASIC6.32□□□□□ -1.4
Rc3h1Q4VGL6 Gm45434-201ENSMUST00000210550 293 ntBASIC6.32□□□□□ -1.4
Rc3h1Q4VGL6 Gm45721-201ENSMUST00000212267 607 ntTSL 3 BASIC6.32□□□□□ -1.4
Rc3h1Q4VGL6 Olfr879-ps1-201ENSMUST00000212455 694 ntBASIC6.32□□□□□ -1.4
Rc3h1Q4VGL6 AC093926.1-201ENSMUST00000213730 243 ntBASIC6.32□□□□□ -1.4
Rc3h1Q4VGL6 Spata19-202ENSMUST00000214158 627 ntTSL 5 BASIC6.32□□□□□ -1.4
Rc3h1Q4VGL6 AC158803.1-201ENSMUST00000219495 316 ntBASIC6.32□□□□□ -1.4
Rc3h1Q4VGL6 Gm40692-201ENSMUST00000220411 491 ntBASIC6.32□□□□□ -1.4
Rc3h1Q4VGL6 Snord47-201ENSMUST00000083034 77 ntBASIC6.32□□□□□ -1.4
Rc3h1Q4VGL6 Gm7676-201ENSMUST00000084055 319 ntBASIC6.32□□□□□ -1.4
Rc3h1Q4VGL6 Gm11808-201ENSMUST00000089430 504 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
Rc3h1Q4VGL6 Mgat4c-202ENSMUST00000120748 2603 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Rc3h1Q4VGL6 Rfx6-201ENSMUST00000050455 3088 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Rc3h1Q4VGL6 AC155922.2-201ENSMUST00000220240 1458 ntTSL 5 BASIC6.32□□□□□ -1.4
Rc3h1Q4VGL6 Rc3h1-201ENSMUST00000035911 3476 ntAPPRIS ALT2 TSL 5 BASIC6.32□□□□□ -1.4
Rc3h1Q4VGL6 Zfp106-211ENSMUST00000171215 6391 ntTSL 5 BASIC6.32□□□□□ -1.4
Rc3h1Q4VGL6 Gm42484-201ENSMUST00000196075 2104 ntBASIC6.32□□□□□ -1.4
Rc3h1Q4VGL6 Gm14326-204ENSMUST00000178829 1665 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
Rc3h1Q4VGL6 Iqch-204ENSMUST00000163982 3375 ntAPPRIS P3 TSL 1 (best) BASIC6.32□□□□□ -1.4
Rc3h1Q4VGL6 Celf2-201ENSMUST00000002176 7718 ntAPPRIS P3 TSL 1 (best) BASIC6.32□□□□□ -1.4
Rc3h1Q4VGL6 Orc3-202ENSMUST00000108142 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC6.32□□□□□ -1.4
Rc3h1Q4VGL6 Ugt1a7c-202ENSMUST00000113135 3302 ntAPPRIS ALT2 TSL 1 (best) BASIC6.32□□□□□ -1.4
Rc3h1Q4VGL6 AC164297.1-201ENSMUST00000224484 1561 ntBASIC6.31□□□□□ -1.4
Rc3h1Q4VGL6 Vmn2r-ps38-201ENSMUST00000173752 2573 ntBASIC6.31□□□□□ -1.4
Rc3h1Q4VGL6 Olfr1313-203ENSMUST00000216071 2599 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
Rc3h1Q4VGL6 Olfr984-204ENSMUST00000217536 5114 ntAPPRIS P1 TSL 3 BASIC6.31□□□□□ -1.4
Rc3h1Q4VGL6 Dhrs9-201ENSMUST00000063690 4281 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Rc3h1Q4VGL6 Gm37833-201ENSMUST00000194342 3256 ntBASIC6.31□□□□□ -1.4
Rc3h1Q4VGL6 Crem-230ENSMUST00000151311 2485 ntAPPRIS ALT1 TSL 5 BASIC6.31□□□□□ -1.4
Rc3h1Q4VGL6 Zfand6-201ENSMUST00000069537 1658 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Rc3h1Q4VGL6 Gm5757-201ENSMUST00000117494 528 ntBASIC6.31□□□□□ -1.4
Rc3h1Q4VGL6 Gm14559-201ENSMUST00000121745 496 ntBASIC6.31□□□□□ -1.4
Rc3h1Q4VGL6 Gm25176-201ENSMUST00000122640 125 ntBASIC6.31□□□□□ -1.4
Rc3h1Q4VGL6 Gm23411-201ENSMUST00000157988 62 ntBASIC6.31□□□□□ -1.4
Rc3h1Q4VGL6 Vmn1r-ps68-201ENSMUST00000174638 399 ntBASIC6.31□□□□□ -1.4
Rc3h1Q4VGL6 Gm2367-201ENSMUST00000192374 472 ntBASIC6.31□□□□□ -1.4
Rc3h1Q4VGL6 Gm37421-201ENSMUST00000193088 132 ntBASIC6.31□□□□□ -1.4
Rc3h1Q4VGL6 Gm30097-201ENSMUST00000193581 447 ntTSL 5 BASIC6.31□□□□□ -1.4
Rc3h1Q4VGL6 Gstm2-ps1-201ENSMUST00000201478 657 ntBASIC6.31□□□□□ -1.4
Rc3h1Q4VGL6 Mir670hg-207ENSMUST00000211619 819 ntTSL 5 BASIC6.31□□□□□ -1.4
Rc3h1Q4VGL6 AL450317.1-201ENSMUST00000213941 291 ntBASIC6.31□□□□□ -1.4
Rc3h1Q4VGL6 1700054O05Rik-201ENSMUST00000214107 555 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Rc3h1Q4VGL6 AC160031.1-201ENSMUST00000219914 522 ntBASIC6.31□□□□□ -1.4
Rc3h1Q4VGL6 CT030166.2-201ENSMUST00000222021 368 ntBASIC6.31□□□□□ -1.4
Rc3h1Q4VGL6 Gm34719-201ENSMUST00000222231 382 ntTSL 5 BASIC6.31□□□□□ -1.4
Rc3h1Q4VGL6 CT030705.1-201ENSMUST00000223971 533 ntBASIC6.31□□□□□ -1.4
Rc3h1Q4VGL6 Rps4x-201ENSMUST00000033683 975 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Rc3h1Q4VGL6 Kap-201ENSMUST00000048032 707 ntAPPRIS P2 TSL 1 (best) BASIC6.31□□□□□ -1.4
Rc3h1Q4VGL6 Olfr937-201ENSMUST00000055567 936 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
Rc3h1Q4VGL6 Rps11-ps4-201ENSMUST00000062226 474 ntBASIC6.31□□□□□ -1.4
Rc3h1Q4VGL6 Gm25139-201ENSMUST00000083247 210 ntBASIC6.31□□□□□ -1.4
Rc3h1Q4VGL6 Slc44a1-205ENSMUST00000107651 4382 ntAPPRIS ALT1 TSL 5 BASIC6.31□□□□□ -1.4
Rc3h1Q4VGL6 Olfr237-ps1-203ENSMUST00000216411 4115 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
Rc3h1Q4VGL6 Vmn2r113-201ENSMUST00000170322 2571 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Rc3h1Q4VGL6 Zfp951-202ENSMUST00000186219 2904 ntAPPRIS P2 TSL 5 BASIC6.31□□□□□ -1.4
Rc3h1Q4VGL6 Olfr1143-203ENSMUST00000111568 1970 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
Rc3h1Q4VGL6 Gm43567-201ENSMUST00000197581 1978 ntBASIC6.31□□□□□ -1.4
Rc3h1Q4VGL6 Gm18913-201ENSMUST00000204311 1789 ntBASIC6.31□□□□□ -1.4
Rc3h1Q4VGL6 P2ry12-202ENSMUST00000170388 2101 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Rc3h1Q4VGL6 Olfr69-201ENSMUST00000106878 2829 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
Rc3h1Q4VGL6 Zfp945-201ENSMUST00000088696 4285 ntAPPRIS ALT2 TSL 1 (best) BASIC6.3□□□□□ -1.4
Rc3h1Q4VGL6 Olfr684-202ENSMUST00000215552 3174 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
Rc3h1Q4VGL6 Olfr684-204ENSMUST00000217136 3182 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
Rc3h1Q4VGL6 Prg4-206ENSMUST00000161611 3821 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
Rc3h1Q4VGL6 AC159896.3-201ENSMUST00000215904 3835 ntBASIC6.3□□□□□ -1.4
Rc3h1Q4VGL6 Gm37051-201ENSMUST00000194535 2943 ntBASIC6.3□□□□□ -1.4
Rc3h1Q4VGL6 Zfp426-208ENSMUST00000166005 1653 ntAPPRIS P3 TSL 5 BASIC6.3□□□□□ -1.4
Rc3h1Q4VGL6 Slc22a28-201ENSMUST00000065651 2004 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Rc3h1Q4VGL6 A630031M04Rik-201ENSMUST00000146587 3568 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Rc3h1Q4VGL6 Gm10352-201ENSMUST00000166474 1482 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
Retrieved 100 of 76,532 protein–RNA pairs in 78.2 ms