Protein–RNA interactions for Protein: Q2UY11

Col28a1, Collagen alpha-1(XXVIII) chain, mousemouse

Predictions only

Length 1,141 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col28a1Q2UY11 Vmn2r-ps43-201ENSMUST00000173798 2473 ntBASIC4.25□□□□□ -1.73
Col28a1Q2UY11 Gm3665-201ENSMUST00000177214 2461 ntBASIC4.25□□□□□ -1.73
Col28a1Q2UY11 Vmn2r-ps51-201ENSMUST00000177271 2461 ntBASIC4.25□□□□□ -1.73
Col28a1Q2UY11 Olr1-204ENSMUST00000183258 468 ntAPPRIS ALT2 TSL 1 (best) BASIC4.25□□□□□ -1.73
Col28a1Q2UY11 Gm28364-201ENSMUST00000187908 334 ntTSL 3 BASIC4.25□□□□□ -1.73
Col28a1Q2UY11 Gm5252-201ENSMUST00000189030 909 ntBASIC4.25□□□□□ -1.73
Col28a1Q2UY11 Gm29276-201ENSMUST00000190453 932 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
Col28a1Q2UY11 Gm19694-201ENSMUST00000192364 505 ntBASIC4.25□□□□□ -1.73
Col28a1Q2UY11 Igkv13-57-2-201ENSMUST00000196590 336 ntBASIC4.25□□□□□ -1.73
Col28a1Q2UY11 Gm18971-201ENSMUST00000197240 374 ntBASIC4.25□□□□□ -1.73
Col28a1Q2UY11 Gm44736-201ENSMUST00000205943 667 ntTSL 3 BASIC4.25□□□□□ -1.73
Col28a1Q2UY11 Gm29920-201ENSMUST00000206876 754 ntBASIC4.25□□□□□ -1.73
Col28a1Q2UY11 Gm19232-201ENSMUST00000211621 652 ntBASIC4.25□□□□□ -1.73
Col28a1Q2UY11 Olfr1086-202ENSMUST00000213198 1153 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
Col28a1Q2UY11 Olfr946-ps1-201ENSMUST00000217547 341 ntBASIC4.25□□□□□ -1.73
Col28a1Q2UY11 Gm18704-201ENSMUST00000219736 446 ntBASIC4.25□□□□□ -1.73
Col28a1Q2UY11 AC141642.1-201ENSMUST00000220598 229 ntBASIC4.25□□□□□ -1.73
Col28a1Q2UY11 AC154335.2-201ENSMUST00000225916 638 ntBASIC4.25□□□□□ -1.73
Col28a1Q2UY11 AC124569.1-201ENSMUST00000225932 101 ntBASIC4.25□□□□□ -1.73
Col28a1Q2UY11 AC154532.2-201ENSMUST00000228947 598 ntBASIC4.25□□□□□ -1.73
Col28a1Q2UY11 Olfr1495-201ENSMUST00000061669 1089 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
Col28a1Q2UY11 Gm7099-201ENSMUST00000080066 554 ntBASIC4.25□□□□□ -1.73
Col28a1Q2UY11 Gm5185-201ENSMUST00000080271 619 ntBASIC4.25□□□□□ -1.73
Col28a1Q2UY11 Mir28a-201ENSMUST00000083560 86 ntBASIC4.25□□□□□ -1.73
Col28a1Q2UY11 2700016F22Rik-201ENSMUST00000181556 3605 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
Col28a1Q2UY11 Vmn2r116-201ENSMUST00000164856 2571 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
Col28a1Q2UY11 Rgs13-202ENSMUST00000111941 1545 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
Col28a1Q2UY11 Gm7451-201ENSMUST00000208382 1392 ntBASIC4.25□□□□□ -1.73
Col28a1Q2UY11 Gm26869-201ENSMUST00000181241 3523 ntTSL 2 BASIC4.25□□□□□ -1.73
Col28a1Q2UY11 Gm42949-201ENSMUST00000197054 2202 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
Col28a1Q2UY11 Neto2-201ENSMUST00000109686 5610 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
Col28a1Q2UY11 AY358078-201ENSMUST00000053821 1461 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
Col28a1Q2UY11 Tdo2-201ENSMUST00000029645 3431 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
Col28a1Q2UY11 Tfpi-205ENSMUST00000111717 2962 ntTSL 5 BASIC4.24□□□□□ -1.73
Col28a1Q2UY11 Olfr726-203ENSMUST00000213345 1728 ntAPPRIS P1 TSL 2 BASIC4.24□□□□□ -1.73
Col28a1Q2UY11 Cntn3-201ENSMUST00000032159 5183 ntAPPRIS P1 TSL 2 BASIC4.24□□□□□ -1.73
Col28a1Q2UY11 Gm20939-201ENSMUST00000108007 1572 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
Col28a1Q2UY11 Gm5746-201ENSMUST00000183550 2200 ntBASIC4.24□□□□□ -1.73
Col28a1Q2UY11 Cdh10-201ENSMUST00000040562 3407 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
Col28a1Q2UY11 4930522H14Rik-202ENSMUST00000102725 854 ntAPPRIS P3 TSL 1 (best) BASIC4.24□□□□□ -1.73
Col28a1Q2UY11 Mir804-201ENSMUST00000103251 95 ntBASIC4.24□□□□□ -1.73
Col28a1Q2UY11 Gm25726-201ENSMUST00000104529 129 ntBASIC4.24□□□□□ -1.73
Col28a1Q2UY11 Ceacam13-202ENSMUST00000108488 1005 ntAPPRIS ALT2 TSL 1 (best) BASIC4.24□□□□□ -1.73
Col28a1Q2UY11 Gm15752-201ENSMUST00000117427 394 ntBASIC4.24□□□□□ -1.73
Col28a1Q2UY11 Gm11262-201ENSMUST00000119326 833 ntBASIC4.24□□□□□ -1.73
Col28a1Q2UY11 Gm14067-201ENSMUST00000119340 314 ntBASIC4.24□□□□□ -1.73
Col28a1Q2UY11 Gm11692-201ENSMUST00000122121 902 ntBASIC4.24□□□□□ -1.73
Col28a1Q2UY11 Gm16274-201ENSMUST00000139251 592 ntBASIC4.24□□□□□ -1.73
Col28a1Q2UY11 Gm14651-201ENSMUST00000147192 442 ntBASIC4.24□□□□□ -1.73
Col28a1Q2UY11 Gm13324-201ENSMUST00000148607 569 ntTSL 3 BASIC4.24□□□□□ -1.73
Col28a1Q2UY11 Gm23501-201ENSMUST00000157744 256 ntBASIC4.24□□□□□ -1.73
Col28a1Q2UY11 C130026I21Rik-207ENSMUST00000162421 591 ntAPPRIS ALT2 TSL 1 (best) BASIC4.24□□□□□ -1.73
Col28a1Q2UY11 Vmn1r-ps15-201ENSMUST00000177365 910 ntBASIC4.24□□□□□ -1.73
Col28a1Q2UY11 A630095N17Rik-202ENSMUST00000180101 571 ntAPPRIS P4 TSL 3 BASIC4.24□□□□□ -1.73
Col28a1Q2UY11 Gm26983-201ENSMUST00000182051 388 ntBASIC4.24□□□□□ -1.73
Col28a1Q2UY11 Mir7022-201ENSMUST00000183749 61 ntBASIC4.24□□□□□ -1.73
Col28a1Q2UY11 Mir6951-201ENSMUST00000183910 75 ntBASIC4.24□□□□□ -1.73
Col28a1Q2UY11 Gm28596-201ENSMUST00000185870 696 ntBASIC4.24□□□□□ -1.73
Col28a1Q2UY11 Gm28779-201ENSMUST00000189678 323 ntBASIC4.24□□□□□ -1.73
Col28a1Q2UY11 Gm32295-201ENSMUST00000192558 696 ntBASIC4.24□□□□□ -1.73
Col28a1Q2UY11 Gm31260-201ENSMUST00000193478 696 ntBASIC4.24□□□□□ -1.73
Col28a1Q2UY11 Gm44403-201ENSMUST00000198554 129 ntBASIC4.24□□□□□ -1.73
Col28a1Q2UY11 Gm43449-201ENSMUST00000202955 371 ntTSL 3 BASIC4.24□□□□□ -1.73
Col28a1Q2UY11 Gm43941-201ENSMUST00000203303 1073 ntBASIC4.24□□□□□ -1.73
Col28a1Q2UY11 Olfr500-ps1-201ENSMUST00000208818 933 ntBASIC4.24□□□□□ -1.73
Col28a1Q2UY11 Gm18258-201ENSMUST00000210413 542 ntBASIC4.24□□□□□ -1.73
Col28a1Q2UY11 Olfr151-201ENSMUST00000211893 1128 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
Col28a1Q2UY11 AC140930.4-201ENSMUST00000220750 150 ntBASIC4.24□□□□□ -1.73
Col28a1Q2UY11 AC132112.1-201ENSMUST00000226354 505 ntBASIC4.24□□□□□ -1.73
Col28a1Q2UY11 Olfr1109-201ENSMUST00000099863 939 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
Col28a1Q2UY11 Olfr1341-203ENSMUST00000215117 4700 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
Col28a1Q2UY11 Igf1-202ENSMUST00000095360 7052 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
Col28a1Q2UY11 Ifi208-202ENSMUST00000169857 1767 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
Col28a1Q2UY11 Zfp951-201ENSMUST00000089906 1356 ntAPPRIS ALT2 TSL 5 BASIC4.24□□□□□ -1.73
Col28a1Q2UY11 Dync2h1-206ENSMUST00000147193 13103 ntAPPRIS ALT2 TSL 5 BASIC4.24□□□□□ -1.73
Col28a1Q2UY11 A530099J19Rik-201ENSMUST00000151029 2764 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
Col28a1Q2UY11 Olfr715b-202ENSMUST00000215713 3879 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
Col28a1Q2UY11 Macc1-205ENSMUST00000222784 4710 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
Col28a1Q2UY11 Olfr1308-202ENSMUST00000207560 2093 ntAPPRIS P1 TSL 3 BASIC4.23□□□□□ -1.73
Col28a1Q2UY11 Cwf19l2-201ENSMUST00000027027 4446 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
Col28a1Q2UY11 Evi2-202ENSMUST00000170422 3944 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
Col28a1Q2UY11 Primpol-201ENSMUST00000040468 3772 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
Col28a1Q2UY11 Gm44288-201ENSMUST00000205061 2795 ntBASIC4.23□□□□□ -1.73
Col28a1Q2UY11 CAAA01194877.1-201ENSMUST00000213137 4233 ntBASIC4.23□□□□□ -1.73
Col28a1Q2UY11 AC124446.1-201ENSMUST00000221027 2644 ntBASIC4.23□□□□□ -1.73
Col28a1Q2UY11 Olfr826-202ENSMUST00000203720 1535 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
Col28a1Q2UY11 6720464F23Rik-201ENSMUST00000193946 3496 ntBASIC4.23□□□□□ -1.73
Col28a1Q2UY11 Gm614-201ENSMUST00000101358 748 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
Col28a1Q2UY11 Gm13803-201ENSMUST00000117547 489 ntBASIC4.23□□□□□ -1.73
Col28a1Q2UY11 Gm14794-201ENSMUST00000118181 192 ntBASIC4.23□□□□□ -1.73
Col28a1Q2UY11 Gm13785-201ENSMUST00000119099 690 ntBASIC4.23□□□□□ -1.73
Col28a1Q2UY11 Gm11512-201ENSMUST00000119669 663 ntBASIC4.23□□□□□ -1.73
Col28a1Q2UY11 Cyp2j7-ps3-201ENSMUST00000121405 206 ntBASIC4.23□□□□□ -1.73
Col28a1Q2UY11 Gm12358-201ENSMUST00000121842 520 ntBASIC4.23□□□□□ -1.73
Col28a1Q2UY11 Chrna1os-201ENSMUST00000125413 680 ntTSL 3 BASIC4.23□□□□□ -1.73
Col28a1Q2UY11 4930405D11Rik-201ENSMUST00000132218 568 ntTSL 3 BASIC4.23□□□□□ -1.73
Col28a1Q2UY11 Gm24751-201ENSMUST00000157844 102 ntBASIC4.23□□□□□ -1.73
Col28a1Q2UY11 Gm3091-201ENSMUST00000163408 484 ntBASIC4.23□□□□□ -1.73
Col28a1Q2UY11 Cylc2-203ENSMUST00000166749 1297 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
Col28a1Q2UY11 Vmn1r115-201ENSMUST00000169374 888 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
Retrieved 100 of 76,532 protein–RNA pairs in 138.3 ms