Protein–RNA interactions for Protein: Q07563

Col17a1, Collagen alpha-1(XVII) chain, mousemouse

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col17a1Q07563 Grin2b-201ENSMUST00000053880 24060 ntAPPRIS P1 TSL 5 BASIC6.42□□□□□ -1.38
Col17a1Q07563 AC123705.2-201ENSMUST00000221653 2009 ntBASIC6.42□□□□□ -1.38
Col17a1Q07563 Clec2e-201ENSMUST00000032258 2099 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
Col17a1Q07563 Nckap5-204ENSMUST00000112583 7212 ntAPPRIS P3 TSL 5 BASIC6.42□□□□□ -1.38
Col17a1Q07563 9430025C20Rik-201ENSMUST00000068663 2115 ntBASIC6.42□□□□□ -1.38
Col17a1Q07563 AC154323.3-201ENSMUST00000226927 1660 ntBASIC6.42□□□□□ -1.38
Col17a1Q07563 Vmn1r201-203ENSMUST00000226965 4741 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
Col17a1Q07563 AC153150.1-201ENSMUST00000226065 3782 ntBASIC6.41□□□□□ -1.38
Col17a1Q07563 Igkv4-57-201ENSMUST00000103357 352 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
Col17a1Q07563 Gm23609-201ENSMUST00000104542 127 ntBASIC6.41□□□□□ -1.38
Col17a1Q07563 Gm14883-201ENSMUST00000120179 157 ntBASIC6.41□□□□□ -1.38
Col17a1Q07563 Gemin6-ps-201ENSMUST00000120444 501 ntBASIC6.41□□□□□ -1.38
Col17a1Q07563 Gm24840-201ENSMUST00000122603 147 ntBASIC6.41□□□□□ -1.38
Col17a1Q07563 Gm15629-201ENSMUST00000161819 476 ntTSL 5 BASIC6.41□□□□□ -1.38
Col17a1Q07563 Mir5101-201ENSMUST00000175181 83 ntBASIC6.41□□□□□ -1.38
Col17a1Q07563 Gm28008-201ENSMUST00000184021 186 ntBASIC6.41□□□□□ -1.38
Col17a1Q07563 Tmem167-ps1-201ENSMUST00000191236 214 ntBASIC6.41□□□□□ -1.38
Col17a1Q07563 4930520M14Rik-201ENSMUST00000196947 701 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
Col17a1Q07563 Gm44727-201ENSMUST00000204225 451 ntBASIC6.41□□□□□ -1.38
Col17a1Q07563 AC122901.2-201ENSMUST00000216926 285 ntBASIC6.41□□□□□ -1.38
Col17a1Q07563 AC133517.1-202ENSMUST00000224409 233 ntBASIC6.41□□□□□ -1.38
Col17a1Q07563 AC166095.1-203ENSMUST00000224591 233 ntBASIC6.41□□□□□ -1.38
Col17a1Q07563 AC125223.1-203ENSMUST00000225304 498 ntBASIC6.41□□□□□ -1.38
Col17a1Q07563 Mucl2-201ENSMUST00000037685 639 ntAPPRIS P2 TSL 1 (best) BASIC6.41□□□□□ -1.38
Col17a1Q07563 Olfr1008-201ENSMUST00000054868 942 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
Col17a1Q07563 Gm25200-201ENSMUST00000083094 130 ntBASIC6.41□□□□□ -1.38
Col17a1Q07563 Mir370-201ENSMUST00000083499 79 ntBASIC6.41□□□□□ -1.38
Col17a1Q07563 Adam24-201ENSMUST00000051614 2887 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
Col17a1Q07563 Vmn2r6-201ENSMUST00000165012 2484 ntAPPRIS P2 TSL 5 BASIC6.41□□□□□ -1.38
Col17a1Q07563 Vmn2r7-203ENSMUST00000168072 2484 ntAPPRIS P2 TSL 5 BASIC6.41□□□□□ -1.38
Col17a1Q07563 Pik3c2g-209ENSMUST00000187618 2023 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
Col17a1Q07563 Postn-203ENSMUST00000107985 3205 ntAPPRIS ALT2 TSL 1 (best) BASIC6.41□□□□□ -1.38
Col17a1Q07563 Olfr220-202ENSMUST00000194229 3286 ntAPPRIS P1 TSL 3 BASIC6.41□□□□□ -1.38
Col17a1Q07563 Slfn9-202ENSMUST00000092840 3862 ntAPPRIS P1 TSL 5 BASIC6.41□□□□□ -1.38
Col17a1Q07563 Vmn1r42-202ENSMUST00000226436 4045 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
Col17a1Q07563 Mtx3-201ENSMUST00000076169 6275 ntAPPRIS P1 TSL 5 BASIC6.41□□□□□ -1.38
Col17a1Q07563 Dync2h1-201ENSMUST00000048417 13972 ntAPPRIS P2 TSL 1 (best) BASIC6.41□□□□□ -1.38
Col17a1Q07563 Cnot1-203ENSMUST00000211887 8364 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
Col17a1Q07563 Ankrd28-204ENSMUST00000227089 3522 ntBASIC6.41□□□□□ -1.38
Col17a1Q07563 Pola1-201ENSMUST00000006856 5346 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
Col17a1Q07563 Gm6591-201ENSMUST00000121063 434 ntBASIC6.41□□□□□ -1.38
Col17a1Q07563 Gm11645-201ENSMUST00000121589 649 ntBASIC6.41□□□□□ -1.38
Col17a1Q07563 Gm15632-201ENSMUST00000135936 246 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
Col17a1Q07563 Gm22135-201ENSMUST00000158752 108 ntBASIC6.41□□□□□ -1.38
Col17a1Q07563 Gm17038-201ENSMUST00000166586 494 ntBASIC6.41□□□□□ -1.38
Col17a1Q07563 Gm27013-201ENSMUST00000182441 1024 ntBASIC6.41□□□□□ -1.38
Col17a1Q07563 Gm20997-201ENSMUST00000205148 231 ntBASIC6.41□□□□□ -1.38
Col17a1Q07563 Gm9628-201ENSMUST00000222169 725 ntBASIC6.41□□□□□ -1.38
Col17a1Q07563 AC173482.1-201ENSMUST00000224494 3815 ntBASIC6.41□□□□□ -1.38
Col17a1Q07563 AC154329.2-201ENSMUST00000225257 383 ntBASIC6.41□□□□□ -1.38
Col17a1Q07563 AC160930.1-201ENSMUST00000227194 337 ntBASIC6.41□□□□□ -1.38
Col17a1Q07563 Vmn1r26-201ENSMUST00000049694 1020 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
Col17a1Q07563 Mup14-201ENSMUST00000071005 652 ntAPPRIS P1 TSL 2 BASIC6.41□□□□□ -1.38
Col17a1Q07563 n-R5s3-201ENSMUST00000083879 112 ntBASIC6.41□□□□□ -1.38
Col17a1Q07563 Olfr1090-201ENSMUST00000099875 942 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
Col17a1Q07563 Ryr3-204ENSMUST00000134358 14958 ntAPPRIS ALT2 TSL 5 BASIC6.41□□□□□ -1.38
Col17a1Q07563 Cnot1-201ENSMUST00000068452 8152 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
Col17a1Q07563 Olfr995-202ENSMUST00000216933 1706 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.38
Col17a1Q07563 Vmn1r9-202ENSMUST00000227399 6778 ntAPPRIS P1 BASIC6.4□□□□□ -1.38
Col17a1Q07563 Muc15-203ENSMUST00000111017 3095 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
Col17a1Q07563 Mrc1-201ENSMUST00000028045 5374 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
Col17a1Q07563 Dnah1-201ENSMUST00000048603 12872 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.39
Col17a1Q07563 Gm23226-201ENSMUST00000116927 103 ntBASIC6.4□□□□□ -1.39
Col17a1Q07563 Gm11321-201ENSMUST00000121257 902 ntBASIC6.4□□□□□ -1.39
Col17a1Q07563 Gm22945-201ENSMUST00000158557 157 ntBASIC6.4□□□□□ -1.39
Col17a1Q07563 Gm21894-201ENSMUST00000179631 546 ntBASIC6.4□□□□□ -1.39
Col17a1Q07563 Tmsb15b2-202ENSMUST00000180194 243 ntAPPRIS P1 TSL 3 BASIC6.4□□□□□ -1.39
Col17a1Q07563 Rp31-ps19-201ENSMUST00000180929 353 ntBASIC6.4□□□□□ -1.39
Col17a1Q07563 Gm29062-201ENSMUST00000186032 694 ntBASIC6.4□□□□□ -1.39
Col17a1Q07563 Gm28255-201ENSMUST00000187101 694 ntBASIC6.4□□□□□ -1.39
Col17a1Q07563 Gm29545-201ENSMUST00000188878 694 ntBASIC6.4□□□□□ -1.39
Col17a1Q07563 Gm37650-201ENSMUST00000193570 248 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
Col17a1Q07563 Csn1s2a-203ENSMUST00000196749 917 ntAPPRIS ALT2 TSL 1 (best) BASIC6.4□□□□□ -1.39
Col17a1Q07563 Gm43825-201ENSMUST00000199650 734 ntBASIC6.4□□□□□ -1.39
Col17a1Q07563 Gm44223-201ENSMUST00000204854 114 ntBASIC6.4□□□□□ -1.39
Col17a1Q07563 Gm7948-201ENSMUST00000212607 844 ntBASIC6.4□□□□□ -1.39
Col17a1Q07563 AC117688.1-201ENSMUST00000213142 832 ntTSL 5 BASIC6.4□□□□□ -1.39
Col17a1Q07563 CT573422.1-201ENSMUST00000216655 405 ntBASIC6.4□□□□□ -1.39
Col17a1Q07563 AC164117.2-201ENSMUST00000222090 327 ntBASIC6.4□□□□□ -1.39
Col17a1Q07563 AC155241.1-201ENSMUST00000222709 415 ntTSL 5 BASIC6.4□□□□□ -1.39
Col17a1Q07563 CT571256.1-201ENSMUST00000226045 585 ntBASIC6.4□□□□□ -1.39
Col17a1Q07563 Olfr1499-201ENSMUST00000055672 1052 ntAPPRIS P1 BASIC6.4□□□□□ -1.39
Col17a1Q07563 Olfr661-201ENSMUST00000098168 964 ntAPPRIS P1 BASIC6.4□□□□□ -1.39
Col17a1Q07563 Gm10665-201ENSMUST00000098720 966 ntAPPRIS P1 BASIC6.4□□□□□ -1.39
Col17a1Q07563 Gm10670-201ENSMUST00000098744 966 ntAPPRIS P1 BASIC6.4□□□□□ -1.39
Col17a1Q07563 D730048I06Rik-201ENSMUST00000034619 1334 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
Col17a1Q07563 Mug1-201ENSMUST00000032228 4657 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
Col17a1Q07563 Gm5460-201ENSMUST00000100719 1903 ntAPPRIS P2 TSL 1 (best) BASIC6.4□□□□□ -1.39
Col17a1Q07563 Olfr963-202ENSMUST00000215649 2203 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
Col17a1Q07563 Vmn2r33-201ENSMUST00000165921 2586 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
Col17a1Q07563 Vmn2r-ps40-201ENSMUST00000174438 2558 ntBASIC6.39□□□□□ -1.39
Col17a1Q07563 Gm43000-201ENSMUST00000198482 3343 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Col17a1Q07563 Gm10723-201ENSMUST00000195366 6918 ntBASIC6.39□□□□□ -1.39
Col17a1Q07563 Rasgrp3-201ENSMUST00000095204 4657 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Col17a1Q07563 Gm3115-201ENSMUST00000166928 1797 ntAPPRIS P5 TSL 5 BASIC6.39□□□□□ -1.39
Col17a1Q07563 Mir1195-201ENSMUST00000116818 98 ntBASIC6.39□□□□□ -1.39
Col17a1Q07563 Gm15094-201ENSMUST00000118394 1131 ntBASIC6.39□□□□□ -1.39
Col17a1Q07563 Gm14360-201ENSMUST00000120670 393 ntBASIC6.39□□□□□ -1.39
Col17a1Q07563 Gm26000-201ENSMUST00000157991 107 ntBASIC6.39□□□□□ -1.39
Col17a1Q07563 Gm17521-201ENSMUST00000165345 468 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
Retrieved 100 of 76,532 protein–RNA pairs in 95.6 ms