Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Vmn1r189-202ENSMUST00000227357 3245 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
Sox1P53783 Gm42715-201ENSMUST00000189629 12746 ntAPPRIS P5 TSL 5 BASIC5.46□□□□□ -1.54
Sox1P53783 Olfr1386-203ENSMUST00000213674 2457 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.54
Sox1P53783 Slc24a2-204ENSMUST00000107158 10499 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
Sox1P53783 Il18r1-206ENSMUST00000195684 2850 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
Sox1P53783 Nlrp5-201ENSMUST00000015866 3508 ntAPPRIS P4 TSL 1 (best) BASIC5.45□□□□□ -1.54
Sox1P53783 Mug2-201ENSMUST00000081777 4579 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
Sox1P53783 Gm17056-201ENSMUST00000164804 2299 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
Sox1P53783 Olfr799-202ENSMUST00000213820 1627 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
Sox1P53783 Ncoa4-201ENSMUST00000111994 3343 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
Sox1P53783 2810428J06Rik-201ENSMUST00000198336 2696 ntBASIC5.45□□□□□ -1.54
Sox1P53783 Lgalsl-201ENSMUST00000047028 3362 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
Sox1P53783 Gm18360-201ENSMUST00000173327 1524 ntBASIC5.45□□□□□ -1.54
Sox1P53783 Gm28964-202ENSMUST00000186771 1502 ntTSL 5 BASIC5.45□□□□□ -1.54
Sox1P53783 Gm29301-202ENSMUST00000189344 1502 ntTSL 5 BASIC5.45□□□□□ -1.54
Sox1P53783 Gm5946-202ENSMUST00000182652 2724 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
Sox1P53783 Gm830-201ENSMUST00000142458 3502 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
Sox1P53783 Ryr3-201ENSMUST00000080673 15422 ntAPPRIS ALT2 TSL 5 BASIC5.45□□□□□ -1.54
Sox1P53783 Gm14878-201ENSMUST00000118167 293 ntBASIC5.45□□□□□ -1.54
Sox1P53783 Hmgb1-ps4-201ENSMUST00000118281 635 ntBASIC5.45□□□□□ -1.54
Sox1P53783 Gm12235-201ENSMUST00000118596 170 ntBASIC5.45□□□□□ -1.54
Sox1P53783 Gm9043-201ENSMUST00000119677 314 ntBASIC5.45□□□□□ -1.54
Sox1P53783 Gm11556-201ENSMUST00000120751 288 ntBASIC5.45□□□□□ -1.54
Sox1P53783 Gm14049-201ENSMUST00000121009 636 ntBASIC5.45□□□□□ -1.54
Sox1P53783 n-R5s174-201ENSMUST00000122638 121 ntBASIC5.45□□□□□ -1.54
Sox1P53783 Mir3471-2-201ENSMUST00000174896 102 ntBASIC5.45□□□□□ -1.54
Sox1P53783 Vmn2r-ps116-201ENSMUST00000175997 126 ntBASIC5.45□□□□□ -1.54
Sox1P53783 Trav7d-4-201ENSMUST00000178768 451 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
Sox1P53783 Cypt14-201ENSMUST00000179096 508 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
Sox1P53783 Trav7-4-201ENSMUST00000181728 451 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
Sox1P53783 Gm36983-201ENSMUST00000192280 1102 ntBASIC5.45□□□□□ -1.54
Sox1P53783 Gm37603-201ENSMUST00000192368 219 ntBASIC5.45□□□□□ -1.54
Sox1P53783 Gm37416-201ENSMUST00000193596 318 ntBASIC5.45□□□□□ -1.54
Sox1P53783 Gm19202-201ENSMUST00000198096 808 ntBASIC5.45□□□□□ -1.54
Sox1P53783 Nxpe1-ps-203ENSMUST00000210879 822 ntTSL 5 BASIC5.45□□□□□ -1.54
Sox1P53783 2210414F02Rik-201ENSMUST00000215316 396 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
Sox1P53783 CT025606.1-201ENSMUST00000218273 324 ntBASIC5.45□□□□□ -1.54
Sox1P53783 AC121966.1-201ENSMUST00000221458 282 ntBASIC5.45□□□□□ -1.54
Sox1P53783 AC119241.1-201ENSMUST00000223651 534 ntBASIC5.45□□□□□ -1.54
Sox1P53783 AC154271.1-201ENSMUST00000224780 383 ntBASIC5.45□□□□□ -1.54
Sox1P53783 Gm25929-201ENSMUST00000082784 107 ntBASIC5.45□□□□□ -1.54
Sox1P53783 Mir323-201ENSMUST00000083683 86 ntBASIC5.45□□□□□ -1.54
Sox1P53783 Xpo7-202ENSMUST00000167242 15121 ntAPPRIS ALT1 TSL 5 BASIC5.45□□□□□ -1.54
Sox1P53783 Zbbx-203ENSMUST00000107776 1978 ntAPPRIS ALT2 TSL 5 BASIC5.45□□□□□ -1.54
Sox1P53783 Gm12018-201ENSMUST00000150694 3375 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
Sox1P53783 Gm43793-201ENSMUST00000201645 1333 ntBASIC5.45□□□□□ -1.54
Sox1P53783 Prom1-216ENSMUST00000197750 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC5.45□□□□□ -1.54
Sox1P53783 Alkbh8-204ENSMUST00000211933 7674 ntAPPRIS P2 TSL 1 (best) BASIC5.45□□□□□ -1.54
Sox1P53783 Olfr1246-204ENSMUST00000217254 5411 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
Sox1P53783 Glb1l3-201ENSMUST00000034448 2468 ntAPPRIS ALT2 TSL 5 BASIC5.45□□□□□ -1.54
Sox1P53783 9430062P05Rik-201ENSMUST00000192703 3345 ntBASIC5.45□□□□□ -1.54
Sox1P53783 AC121844.3-201ENSMUST00000219124 1785 ntBASIC5.44□□□□□ -1.54
Sox1P53783 Ireb2-201ENSMUST00000034843 5770 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
Sox1P53783 Nol8-201ENSMUST00000021824 4242 ntAPPRIS P2 TSL 5 BASIC5.44□□□□□ -1.54
Sox1P53783 Klhl24-201ENSMUST00000023509 6683 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
Sox1P53783 Gm10165-201ENSMUST00000217666 2380 ntTSL 2 BASIC5.44□□□□□ -1.54
Sox1P53783 Prom1-206ENSMUST00000171543 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC5.44□□□□□ -1.54
Sox1P53783 Olfr1359-203ENSMUST00000214435 4425 ntAPPRIS P1 TSL 2 BASIC5.44□□□□□ -1.54
Sox1P53783 Spef2-206ENSMUST00000208854 7038 ntAPPRIS ALT2 TSL 5 BASIC5.44□□□□□ -1.54
Sox1P53783 Trhr-201ENSMUST00000038856 3608 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
Sox1P53783 Dnah3-204ENSMUST00000209154 12265 ntAPPRIS P5 TSL 5 BASIC5.44□□□□□ -1.54
Sox1P53783 Mir761-201ENSMUST00000103245 76 ntBASIC5.44□□□□□ -1.54
Sox1P53783 Gm23273-201ENSMUST00000104058 135 ntBASIC5.44□□□□□ -1.54
Sox1P53783 Gm13717-201ENSMUST00000119868 365 ntBASIC5.44□□□□□ -1.54
Sox1P53783 Gm13973-201ENSMUST00000121371 894 ntBASIC5.44□□□□□ -1.54
Sox1P53783 n-R5s48-201ENSMUST00000122482 110 ntBASIC5.44□□□□□ -1.54
Sox1P53783 Gm12505-201ENSMUST00000146041 757 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
Sox1P53783 Gm24499-201ENSMUST00000158446 104 ntBASIC5.44□□□□□ -1.54
Sox1P53783 Gm27999-201ENSMUST00000183539 193 ntBASIC5.44□□□□□ -1.54
Sox1P53783 Gm29260-201ENSMUST00000186391 2759 ntTSL 3 BASIC5.44□□□□□ -1.54
Sox1P53783 Gm18964-201ENSMUST00000193013 563 ntBASIC5.44□□□□□ -1.54
Sox1P53783 Gm45083-201ENSMUST00000205216 712 ntTSL 3 BASIC5.44□□□□□ -1.54
Sox1P53783 Gm6009-201ENSMUST00000210848 280 ntBASIC5.44□□□□□ -1.54
Sox1P53783 Gm45710-201ENSMUST00000212847 215 ntBASIC5.44□□□□□ -1.54
Sox1P53783 Xpo7-203ENSMUST00000226448 3663 ntBASIC5.44□□□□□ -1.54
Sox1P53783 Vmn1r171-212ENSMUST00000228674 2488 ntAPPRIS ALT2 BASIC5.44□□□□□ -1.54
Sox1P53783 Sucnr1-201ENSMUST00000029326 1571 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
Sox1P53783 Bglap-201ENSMUST00000076048 440 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
Sox1P53783 Olfr1458-201ENSMUST00000076729 906 ntAPPRIS ALT2 BASIC5.44□□□□□ -1.54
Sox1P53783 Tcf7l2-202ENSMUST00000061496 4053 ntAPPRIS P3 TSL 5 BASIC5.44□□□□□ -1.54
Sox1P53783 Gm45671-201ENSMUST00000210229 3920 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
Sox1P53783 Gm14327-202ENSMUST00000108935 1451 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
Sox1P53783 Dhrs9-201ENSMUST00000063690 4281 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
Sox1P53783 Zfp945-201ENSMUST00000088696 4285 ntAPPRIS ALT2 TSL 1 (best) BASIC5.44□□□□□ -1.54
Sox1P53783 Ccdc7a-205ENSMUST00000214889 5544 ntAPPRIS ALT2 TSL 5 BASIC5.44□□□□□ -1.54
Sox1P53783 Vmn2r1-201ENSMUST00000029406 2739 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
Sox1P53783 Gm37023-201ENSMUST00000192895 2426 ntBASIC5.44□□□□□ -1.54
Sox1P53783 Kmt2d-201ENSMUST00000023741 19823 ntAPPRIS P2 TSL 5 BASIC5.44□□□□□ -1.54
Sox1P53783 Slc9a9-201ENSMUST00000033463 3468 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
Sox1P53783 Zfp113-201ENSMUST00000049393 6470 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
Sox1P53783 Zfp287-201ENSMUST00000005399 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC5.43□□□□□ -1.54
Sox1P53783 Chd9-201ENSMUST00000048665 12008 ntAPPRIS P3 TSL 1 (best) BASIC5.43□□□□□ -1.54
Sox1P53783 Gm43891-201ENSMUST00000205132 3112 ntBASIC5.43□□□□□ -1.54
Sox1P53783 Olfr744-203ENSMUST00000216690 1765 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
Sox1P53783 Gm13452-201ENSMUST00000120896 1097 ntBASIC5.43□□□□□ -1.54
Sox1P53783 Gm4912-201ENSMUST00000122212 1044 ntBASIC5.43□□□□□ -1.54
Sox1P53783 Gm14027-201ENSMUST00000135186 622 ntTSL 3 BASIC5.43□□□□□ -1.54
Sox1P53783 Gm22383-201ENSMUST00000158188 327 ntBASIC5.43□□□□□ -1.54
Sox1P53783 Gm24175-201ENSMUST00000158931 129 ntBASIC5.43□□□□□ -1.54
Sox1P53783 Gm22290-201ENSMUST00000177655 107 ntBASIC5.43□□□□□ -1.54
Retrieved 100 of 76,532 protein–RNA pairs in 67.5 ms