Protein–RNA interactions for Protein: O88704

Hcn1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, mousemouse

Predictions only

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcn1O88704 2210418O10Rik-203ENSMUST00000136719 2314 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
Hcn1O88704 4930548K13Rik-201ENSMUST00000154459 561 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
Hcn1O88704 Prl3d2-202ENSMUST00000164964 675 ntAPPRIS ALT2 TSL 1 (best) BASIC3.91□□□□□ -1.78
Hcn1O88704 Gm9613-201ENSMUST00000171662 196 ntBASIC3.91□□□□□ -1.78
Hcn1O88704 Gm21865-201ENSMUST00000177713 498 ntTSL 5 BASIC3.91□□□□□ -1.78
Hcn1O88704 Mir3473f-201ENSMUST00000183743 136 ntBASIC3.91□□□□□ -1.78
Hcn1O88704 Mir8118-201ENSMUST00000183962 129 ntBASIC3.91□□□□□ -1.78
Hcn1O88704 Gm18667-201ENSMUST00000186523 484 ntBASIC3.91□□□□□ -1.78
Hcn1O88704 Gm29563-201ENSMUST00000187249 496 ntBASIC3.91□□□□□ -1.78
Hcn1O88704 1700121L16Rik-201ENSMUST00000189166 561 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
Hcn1O88704 Gm17777-201ENSMUST00000189740 1276 ntBASIC3.91□□□□□ -1.78
Hcn1O88704 2610001A08Rik-201ENSMUST00000193315 867 ntBASIC3.91□□□□□ -1.78
Hcn1O88704 Trbv11-201ENSMUST00000194354 260 ntBASIC3.91□□□□□ -1.78
Hcn1O88704 Gm42958-201ENSMUST00000197595 318 ntBASIC3.91□□□□□ -1.78
Hcn1O88704 Dnajc5g-202ENSMUST00000201740 581 ntAPPRIS ALT2 TSL 3 BASIC3.91□□□□□ -1.78
Hcn1O88704 2200007N16Rik-201ENSMUST00000206367 238 ntBASIC3.91□□□□□ -1.78
Hcn1O88704 Gm44742-201ENSMUST00000207190 1412 ntBASIC3.91□□□□□ -1.78
Hcn1O88704 Gm7407-201ENSMUST00000208301 568 ntBASIC3.91□□□□□ -1.78
Hcn1O88704 Bc1-ps1-201ENSMUST00000208471 318 ntBASIC3.91□□□□□ -1.78
Hcn1O88704 Gm6657-204ENSMUST00000211288 1091 ntAPPRIS P5 TSL 5 BASIC3.91□□□□□ -1.78
Hcn1O88704 Gm45727-201ENSMUST00000212886 572 ntBASIC3.91□□□□□ -1.78
Hcn1O88704 AC156504.1-201ENSMUST00000214608 157 ntBASIC3.91□□□□□ -1.78
Hcn1O88704 AC131677.1-201ENSMUST00000218721 535 ntBASIC3.91□□□□□ -1.78
Hcn1O88704 CT009765.2-201ENSMUST00000221331 392 ntBASIC3.91□□□□□ -1.78
Hcn1O88704 Gm7093-201ENSMUST00000223004 581 ntBASIC3.91□□□□□ -1.78
Hcn1O88704 AC102352.1-201ENSMUST00000224187 582 ntBASIC3.91□□□□□ -1.78
Hcn1O88704 AC239878.1-201ENSMUST00000224212 506 ntBASIC3.91□□□□□ -1.78
Hcn1O88704 AC160756.1-201ENSMUST00000227266 235 ntBASIC3.91□□□□□ -1.78
Hcn1O88704 March1-202ENSMUST00000072482 3953 ntTSL 5 BASIC3.91□□□□□ -1.78
Hcn1O88704 Olfr969-201ENSMUST00000074566 936 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
Hcn1O88704 Olfr1369-ps1-201ENSMUST00000079050 954 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
Hcn1O88704 Gm23928-201ENSMUST00000082469 145 ntBASIC3.91□□□□□ -1.78
Hcn1O88704 Cd300ld2-201ENSMUST00000092463 381 ntTSL 5 BASIC3.91□□□□□ -1.78
Hcn1O88704 Olfr382-201ENSMUST00000092921 939 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
Hcn1O88704 Gm13212-201ENSMUST00000097794 1221 ntTSL 5 BASIC3.91□□□□□ -1.78
Hcn1O88704 Vmn1r82-201ENSMUST00000072801 4784 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
Hcn1O88704 Cubn-201ENSMUST00000091436 11262 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
Hcn1O88704 Gm8402-201ENSMUST00000118183 1770 ntBASIC3.91□□□□□ -1.78
Hcn1O88704 Gm8383-201ENSMUST00000121179 1770 ntBASIC3.91□□□□□ -1.78
Hcn1O88704 Gm2912-201ENSMUST00000223472 1799 ntTSL 5 BASIC3.91□□□□□ -1.78
Hcn1O88704 Olfr729-202ENSMUST00000213163 4283 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
Hcn1O88704 Cfh-203ENSMUST00000111977 4100 ntAPPRIS ALT2 TSL 1 (best) BASIC3.91□□□□□ -1.78
Hcn1O88704 Olfr736-202ENSMUST00000213402 2402 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
Hcn1O88704 BC002059-202ENSMUST00000190415 1964 ntTSL 2 BASIC3.91□□□□□ -1.78
Hcn1O88704 Vmn1r89-204ENSMUST00000227239 1992 ntAPPRIS P2 BASIC3.91□□□□□ -1.78
Hcn1O88704 Casp12-201ENSMUST00000027009 2649 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
Hcn1O88704 Xrn1-202ENSMUST00000185633 10256 ntAPPRIS ALT2 TSL 1 (best) BASIC3.91□□□□□ -1.78
Hcn1O88704 Gm37045-201ENSMUST00000192016 2463 ntBASIC3.9□□□□□ -1.78
Hcn1O88704 Nap1l1-202ENSMUST00000171797 3926 ntTSL 1 (best) BASIC3.9□□□□□ -1.78
Hcn1O88704 Nap1l1-204ENSMUST00000218828 3934 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
Hcn1O88704 Mmp12-201ENSMUST00000005950 3607 ntAPPRIS P3 TSL 1 (best) BASIC3.9□□□□□ -1.78
Hcn1O88704 Olfr741-203ENSMUST00000213903 3305 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.78
Hcn1O88704 AC156560.3-201ENSMUST00000222978 3841 ntBASIC3.9□□□□□ -1.78
Hcn1O88704 Gm44708-201ENSMUST00000205580 2237 ntBASIC3.9□□□□□ -1.78
Hcn1O88704 Ndst4-204ENSMUST00000173932 7417 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.78
Hcn1O88704 Gm43320-201ENSMUST00000196047 2916 ntBASIC3.9□□□□□ -1.78
Hcn1O88704 A230081H15Rik-201ENSMUST00000218326 2929 ntBASIC3.9□□□□□ -1.78
Hcn1O88704 Gm43260-201ENSMUST00000197378 2430 ntBASIC3.9□□□□□ -1.78
Hcn1O88704 2310001H17Rik-203ENSMUST00000181517 3981 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
Hcn1O88704 Tom1l1-201ENSMUST00000020849 4308 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
Hcn1O88704 Gm23481-201ENSMUST00000104173 131 ntBASIC3.9□□□□□ -1.79
Hcn1O88704 Gm22488-201ENSMUST00000116811 127 ntBASIC3.9□□□□□ -1.79
Hcn1O88704 Gm11432-201ENSMUST00000117334 231 ntBASIC3.9□□□□□ -1.79
Hcn1O88704 Gm11625-201ENSMUST00000119535 296 ntBASIC3.9□□□□□ -1.79
Hcn1O88704 Gm12873-201ENSMUST00000119988 422 ntBASIC3.9□□□□□ -1.79
Hcn1O88704 4930451E10Rik-201ENSMUST00000130840 409 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
Hcn1O88704 Gm25908-201ENSMUST00000157624 98 ntBASIC3.9□□□□□ -1.79
Hcn1O88704 H2al2c-201ENSMUST00000163651 336 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
Hcn1O88704 H2al2b-201ENSMUST00000168551 336 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
Hcn1O88704 Vmn1r139-201ENSMUST00000169730 894 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
Hcn1O88704 Vmn1r112-201ENSMUST00000174538 894 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
Hcn1O88704 Vmn1r157-201ENSMUST00000178215 894 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
Hcn1O88704 Rp31-ps19-201ENSMUST00000180929 353 ntBASIC3.9□□□□□ -1.79
Hcn1O88704 Gm26933-201ENSMUST00000182320 827 ntBASIC3.9□□□□□ -1.79
Hcn1O88704 1700067G17Rik-201ENSMUST00000186180 603 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
Hcn1O88704 Gm19503-201ENSMUST00000187109 241 ntBASIC3.9□□□□□ -1.79
Hcn1O88704 Scgb2b16-ps-201ENSMUST00000188720 333 ntBASIC3.9□□□□□ -1.79
Hcn1O88704 Gm38270-201ENSMUST00000192721 407 ntBASIC3.9□□□□□ -1.79
Hcn1O88704 Tgif1-ps-201ENSMUST00000201864 736 ntBASIC3.9□□□□□ -1.79
Hcn1O88704 Gm43004-201ENSMUST00000201872 703 ntBASIC3.9□□□□□ -1.79
Hcn1O88704 Olfr442-ps1-201ENSMUST00000204261 316 ntBASIC3.9□□□□□ -1.79
Hcn1O88704 Gm17780-201ENSMUST00000207142 612 ntBASIC3.9□□□□□ -1.79
Hcn1O88704 Gm18602-201ENSMUST00000209794 851 ntBASIC3.9□□□□□ -1.79
Hcn1O88704 Gm18644-201ENSMUST00000211458 815 ntBASIC3.9□□□□□ -1.79
Hcn1O88704 Tas2r106-201ENSMUST00000076756 927 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
Hcn1O88704 Olfr857-201ENSMUST00000077023 930 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
Hcn1O88704 mt-Co2-201ENSMUST00000082405 684 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
Hcn1O88704 Gm26439-201ENSMUST00000082592 106 ntBASIC3.9□□□□□ -1.79
Hcn1O88704 Mir421-201ENSMUST00000083575 76 ntBASIC3.9□□□□□ -1.79
Hcn1O88704 Gm22578-201ENSMUST00000083730 107 ntBASIC3.9□□□□□ -1.79
Hcn1O88704 Vmn1r194-201ENSMUST00000091737 891 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
Hcn1O88704 Tas2r115-201ENSMUST00000095394 1033 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
Hcn1O88704 Vmn1r132-201ENSMUST00000098736 894 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
Hcn1O88704 4921515E04Rik-203ENSMUST00000227364 2309 ntBASIC3.9□□□□□ -1.79
Hcn1O88704 Zscan4f-202ENSMUST00000145237 1829 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
Hcn1O88704 Olfr112-205ENSMUST00000213274 3558 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.79
Hcn1O88704 AC153522.2-201ENSMUST00000218389 3853 ntBASIC3.9□□□□□ -1.79
Hcn1O88704 Cdh7-209ENSMUST00000172005 3353 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
Hcn1O88704 Gm10256-201ENSMUST00000179404 1358 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
Hcn1O88704 Gm37965-201ENSMUST00000195304 1362 ntBASIC3.89□□□□□ -1.79
Retrieved 100 of 76,532 protein–RNA pairs in 105.2 ms