Protein–RNA interactions for Protein: S4R1G7

H2afb3, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb3S4R1G7 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
H2afb3S4R1G7 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC15.63■□□□□ 0.09
H2afb3S4R1G7 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
H2afb3S4R1G7 Gm45244-201ENSMUST00000211328 2200 ntBASIC15.63■□□□□ 0.09
H2afb3S4R1G7 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
H2afb3S4R1G7 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
H2afb3S4R1G7 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
H2afb3S4R1G7 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
H2afb3S4R1G7 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC15.63■□□□□ 0.09
H2afb3S4R1G7 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
H2afb3S4R1G7 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
H2afb3S4R1G7 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
H2afb3S4R1G7 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
H2afb3S4R1G7 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
H2afb3S4R1G7 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
H2afb3S4R1G7 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
H2afb3S4R1G7 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
H2afb3S4R1G7 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
H2afb3S4R1G7 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
H2afb3S4R1G7 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
H2afb3S4R1G7 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
H2afb3S4R1G7 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
H2afb3S4R1G7 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
H2afb3S4R1G7 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
H2afb3S4R1G7 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
H2afb3S4R1G7 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC15.62■□□□□ 0.09
H2afb3S4R1G7 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
H2afb3S4R1G7 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
H2afb3S4R1G7 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
H2afb3S4R1G7 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
H2afb3S4R1G7 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC15.62■□□□□ 0.09
H2afb3S4R1G7 Gm13148-201ENSMUST00000118892 745 ntBASIC15.62■□□□□ 0.09
H2afb3S4R1G7 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
H2afb3S4R1G7 Gm43808-201ENSMUST00000202534 2065 ntBASIC15.62■□□□□ 0.09
H2afb3S4R1G7 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
H2afb3S4R1G7 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
H2afb3S4R1G7 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
H2afb3S4R1G7 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
H2afb3S4R1G7 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
H2afb3S4R1G7 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
H2afb3S4R1G7 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
H2afb3S4R1G7 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
H2afb3S4R1G7 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC15.61■□□□□ 0.09
H2afb3S4R1G7 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
H2afb3S4R1G7 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
H2afb3S4R1G7 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
H2afb3S4R1G7 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
H2afb3S4R1G7 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
H2afb3S4R1G7 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
H2afb3S4R1G7 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC15.61■□□□□ 0.09
H2afb3S4R1G7 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
H2afb3S4R1G7 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC15.61■□□□□ 0.09
H2afb3S4R1G7 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
H2afb3S4R1G7 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
H2afb3S4R1G7 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC15.61■□□□□ 0.09
H2afb3S4R1G7 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
H2afb3S4R1G7 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC15.61■□□□□ 0.09
H2afb3S4R1G7 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC15.61■□□□□ 0.09
H2afb3S4R1G7 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
H2afb3S4R1G7 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
H2afb3S4R1G7 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
H2afb3S4R1G7 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC15.6■□□□□ 0.09
H2afb3S4R1G7 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
H2afb3S4R1G7 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
H2afb3S4R1G7 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
H2afb3S4R1G7 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
H2afb3S4R1G7 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
H2afb3S4R1G7 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
H2afb3S4R1G7 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
H2afb3S4R1G7 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
H2afb3S4R1G7 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
H2afb3S4R1G7 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
H2afb3S4R1G7 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
H2afb3S4R1G7 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
H2afb3S4R1G7 Gm15847-201ENSMUST00000121417 1065 ntBASIC15.6■□□□□ 0.09
H2afb3S4R1G7 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
H2afb3S4R1G7 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
H2afb3S4R1G7 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC15.6■□□□□ 0.09
H2afb3S4R1G7 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
H2afb3S4R1G7 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
H2afb3S4R1G7 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
H2afb3S4R1G7 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC15.6■□□□□ 0.09
H2afb3S4R1G7 Gm45412-201ENSMUST00000210217 2275 ntBASIC15.6■□□□□ 0.09
H2afb3S4R1G7 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
H2afb3S4R1G7 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
H2afb3S4R1G7 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
H2afb3S4R1G7 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
H2afb3S4R1G7 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
H2afb3S4R1G7 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
H2afb3S4R1G7 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
H2afb3S4R1G7 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
H2afb3S4R1G7 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC15.59■□□□□ 0.09
H2afb3S4R1G7 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
H2afb3S4R1G7 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
H2afb3S4R1G7 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
H2afb3S4R1G7 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
H2afb3S4R1G7 Gm12933-201ENSMUST00000120203 872 ntBASIC15.59■□□□□ 0.09
H2afb3S4R1G7 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC15.59■□□□□ 0.09
H2afb3S4R1G7 Gm5408-201ENSMUST00000197998 747 ntBASIC15.59■□□□□ 0.09
H2afb3S4R1G7 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 20.3 ms