Protein–RNA interactions for Protein: Q9Z2L7

Crlf3, Cytokine receptor-like factor 3, mousemouse

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Crlf3Q9Z2L7 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.4
Crlf3Q9Z2L7 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC17.58■□□□□ 0.4
Crlf3Q9Z2L7 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC17.58■□□□□ 0.4
Crlf3Q9Z2L7 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Crlf3Q9Z2L7 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Crlf3Q9Z2L7 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Crlf3Q9Z2L7 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Crlf3Q9Z2L7 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Crlf3Q9Z2L7 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Crlf3Q9Z2L7 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Crlf3Q9Z2L7 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Crlf3Q9Z2L7 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
Crlf3Q9Z2L7 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Crlf3Q9Z2L7 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Crlf3Q9Z2L7 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Crlf3Q9Z2L7 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC17.57■□□□□ 0.4
Crlf3Q9Z2L7 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Crlf3Q9Z2L7 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Crlf3Q9Z2L7 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Crlf3Q9Z2L7 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Crlf3Q9Z2L7 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Crlf3Q9Z2L7 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Crlf3Q9Z2L7 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Crlf3Q9Z2L7 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Crlf3Q9Z2L7 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Crlf3Q9Z2L7 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Crlf3Q9Z2L7 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Crlf3Q9Z2L7 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC17.56■□□□□ 0.4
Crlf3Q9Z2L7 Gm7514-201ENSMUST00000209475 934 ntBASIC17.56■□□□□ 0.4
Crlf3Q9Z2L7 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC17.56■□□□□ 0.4
Crlf3Q9Z2L7 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC17.56■□□□□ 0.4
Crlf3Q9Z2L7 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Crlf3Q9Z2L7 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Crlf3Q9Z2L7 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Crlf3Q9Z2L7 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Crlf3Q9Z2L7 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Crlf3Q9Z2L7 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Crlf3Q9Z2L7 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Crlf3Q9Z2L7 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Crlf3Q9Z2L7 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Crlf3Q9Z2L7 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Crlf3Q9Z2L7 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Crlf3Q9Z2L7 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Crlf3Q9Z2L7 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Crlf3Q9Z2L7 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Crlf3Q9Z2L7 Gm10655-201ENSMUST00000098658 1397 ntBASIC17.55■□□□□ 0.4
Crlf3Q9Z2L7 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Crlf3Q9Z2L7 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Crlf3Q9Z2L7 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Crlf3Q9Z2L7 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Crlf3Q9Z2L7 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Crlf3Q9Z2L7 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Crlf3Q9Z2L7 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Crlf3Q9Z2L7 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Crlf3Q9Z2L7 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Crlf3Q9Z2L7 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Crlf3Q9Z2L7 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Crlf3Q9Z2L7 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Crlf3Q9Z2L7 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Crlf3Q9Z2L7 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Crlf3Q9Z2L7 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Crlf3Q9Z2L7 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC17.55■□□□□ 0.4
Crlf3Q9Z2L7 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Crlf3Q9Z2L7 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Crlf3Q9Z2L7 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Crlf3Q9Z2L7 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Crlf3Q9Z2L7 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Crlf3Q9Z2L7 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Crlf3Q9Z2L7 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Crlf3Q9Z2L7 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC17.54■□□□□ 0.4
Crlf3Q9Z2L7 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Crlf3Q9Z2L7 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Crlf3Q9Z2L7 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Crlf3Q9Z2L7 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Crlf3Q9Z2L7 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Crlf3Q9Z2L7 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Crlf3Q9Z2L7 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Crlf3Q9Z2L7 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC17.54■□□□□ 0.4
Crlf3Q9Z2L7 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC17.54■□□□□ 0.4
Crlf3Q9Z2L7 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Crlf3Q9Z2L7 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Crlf3Q9Z2L7 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Crlf3Q9Z2L7 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Crlf3Q9Z2L7 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Crlf3Q9Z2L7 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Crlf3Q9Z2L7 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Crlf3Q9Z2L7 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Crlf3Q9Z2L7 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Crlf3Q9Z2L7 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC17.53■□□□□ 0.4
Crlf3Q9Z2L7 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Crlf3Q9Z2L7 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Crlf3Q9Z2L7 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Crlf3Q9Z2L7 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Crlf3Q9Z2L7 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC17.53■□□□□ 0.4
Crlf3Q9Z2L7 Haglr-201ENSMUST00000100000 2085 ntBASIC17.53■□□□□ 0.4
Crlf3Q9Z2L7 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC17.53■□□□□ 0.4
Crlf3Q9Z2L7 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC17.53■□□□□ 0.4
Crlf3Q9Z2L7 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC17.53■□□□□ 0.4
Crlf3Q9Z2L7 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Crlf3Q9Z2L7 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 24.1 ms