Protein–RNA interactions for Protein: Q9Z0G9

Cldn3, Claudin-3, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn3Q9Z0G9 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Cldn3Q9Z0G9 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC17.57■□□□□ 0.4
Cldn3Q9Z0G9 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
Cldn3Q9Z0G9 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cldn3Q9Z0G9 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cldn3Q9Z0G9 Gm10517-202ENSMUST00000192970 758 ntBASIC17.57■□□□□ 0.4
Cldn3Q9Z0G9 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC17.57■□□□□ 0.4
Cldn3Q9Z0G9 Gm4974-201ENSMUST00000209974 875 ntBASIC17.57■□□□□ 0.4
Cldn3Q9Z0G9 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cldn3Q9Z0G9 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cldn3Q9Z0G9 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC17.57■□□□□ 0.4
Cldn3Q9Z0G9 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC17.57■□□□□ 0.4
Cldn3Q9Z0G9 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cldn3Q9Z0G9 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cldn3Q9Z0G9 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC17.57■□□□□ 0.4
Cldn3Q9Z0G9 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cldn3Q9Z0G9 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Cldn3Q9Z0G9 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cldn3Q9Z0G9 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cldn3Q9Z0G9 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cldn3Q9Z0G9 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cldn3Q9Z0G9 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Cldn3Q9Z0G9 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC17.56■□□□□ 0.4
Cldn3Q9Z0G9 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cldn3Q9Z0G9 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cldn3Q9Z0G9 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cldn3Q9Z0G9 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cldn3Q9Z0G9 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
Cldn3Q9Z0G9 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Cldn3Q9Z0G9 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC17.56■□□□□ 0.4
Cldn3Q9Z0G9 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC17.56■□□□□ 0.4
Cldn3Q9Z0G9 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC17.56■□□□□ 0.4
Cldn3Q9Z0G9 AC153881.1-201ENSMUST00000214448 284 ntBASIC17.56■□□□□ 0.4
Cldn3Q9Z0G9 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Cldn3Q9Z0G9 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cldn3Q9Z0G9 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Cldn3Q9Z0G9 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cldn3Q9Z0G9 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cldn3Q9Z0G9 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC17.56■□□□□ 0.4
Cldn3Q9Z0G9 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cldn3Q9Z0G9 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cldn3Q9Z0G9 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Cldn3Q9Z0G9 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cldn3Q9Z0G9 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cldn3Q9Z0G9 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cldn3Q9Z0G9 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC17.55■□□□□ 0.4
Cldn3Q9Z0G9 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cldn3Q9Z0G9 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cldn3Q9Z0G9 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Cldn3Q9Z0G9 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cldn3Q9Z0G9 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Cldn3Q9Z0G9 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC17.55■□□□□ 0.4
Cldn3Q9Z0G9 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC17.55■□□□□ 0.4
Cldn3Q9Z0G9 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cldn3Q9Z0G9 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Cldn3Q9Z0G9 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC17.55■□□□□ 0.4
Cldn3Q9Z0G9 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cldn3Q9Z0G9 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cldn3Q9Z0G9 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cldn3Q9Z0G9 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Cldn3Q9Z0G9 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cldn3Q9Z0G9 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cldn3Q9Z0G9 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cldn3Q9Z0G9 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Cldn3Q9Z0G9 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cldn3Q9Z0G9 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC17.54■□□□□ 0.4
Cldn3Q9Z0G9 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Cldn3Q9Z0G9 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cldn3Q9Z0G9 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Cldn3Q9Z0G9 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cldn3Q9Z0G9 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cldn3Q9Z0G9 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cldn3Q9Z0G9 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Cldn3Q9Z0G9 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cldn3Q9Z0G9 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Cldn3Q9Z0G9 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Cldn3Q9Z0G9 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cldn3Q9Z0G9 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Cldn3Q9Z0G9 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cldn3Q9Z0G9 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cldn3Q9Z0G9 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cldn3Q9Z0G9 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Cldn3Q9Z0G9 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cldn3Q9Z0G9 Mir1199-201ENSMUST00000117015 119 ntBASIC17.53■□□□□ 0.4
Cldn3Q9Z0G9 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cldn3Q9Z0G9 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Cldn3Q9Z0G9 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cldn3Q9Z0G9 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Cldn3Q9Z0G9 Gm9694-201ENSMUST00000193347 1189 ntBASIC17.53■□□□□ 0.4
Cldn3Q9Z0G9 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cldn3Q9Z0G9 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
Cldn3Q9Z0G9 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Cldn3Q9Z0G9 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cldn3Q9Z0G9 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Cldn3Q9Z0G9 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Cldn3Q9Z0G9 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Cldn3Q9Z0G9 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Cldn3Q9Z0G9 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Cldn3Q9Z0G9 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC17.52■□□□□ 0.4
Cldn3Q9Z0G9 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms