Protein–RNA interactions for Protein: Q9WUH2

Lhx9, LIM/homeobox protein Lhx9, mousemouse

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx9Q9WUH2 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
Lhx9Q9WUH2 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
Lhx9Q9WUH2 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC16.52■□□□□ 0.23
Lhx9Q9WUH2 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
Lhx9Q9WUH2 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Lhx9Q9WUH2 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Lhx9Q9WUH2 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Lhx9Q9WUH2 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC16.52■□□□□ 0.23
Lhx9Q9WUH2 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC16.52■□□□□ 0.23
Lhx9Q9WUH2 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Lhx9Q9WUH2 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Lhx9Q9WUH2 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Lhx9Q9WUH2 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Lhx9Q9WUH2 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Lhx9Q9WUH2 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Lhx9Q9WUH2 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Lhx9Q9WUH2 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC16.51■□□□□ 0.23
Lhx9Q9WUH2 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
Lhx9Q9WUH2 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Lhx9Q9WUH2 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC16.51■□□□□ 0.23
Lhx9Q9WUH2 Gm18959-201ENSMUST00000208954 655 ntBASIC16.51■□□□□ 0.23
Lhx9Q9WUH2 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Lhx9Q9WUH2 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Lhx9Q9WUH2 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Lhx9Q9WUH2 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Lhx9Q9WUH2 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Lhx9Q9WUH2 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Lhx9Q9WUH2 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Lhx9Q9WUH2 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Lhx9Q9WUH2 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Lhx9Q9WUH2 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC16.5■□□□□ 0.23
Lhx9Q9WUH2 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Lhx9Q9WUH2 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Lhx9Q9WUH2 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Lhx9Q9WUH2 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC16.5■□□□□ 0.23
Lhx9Q9WUH2 Gm38027-201ENSMUST00000192315 235 ntBASIC16.5■□□□□ 0.23
Lhx9Q9WUH2 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC16.5■□□□□ 0.23
Lhx9Q9WUH2 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC16.5■□□□□ 0.23
Lhx9Q9WUH2 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Lhx9Q9WUH2 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Lhx9Q9WUH2 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Lhx9Q9WUH2 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Lhx9Q9WUH2 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Lhx9Q9WUH2 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC16.5■□□□□ 0.23
Lhx9Q9WUH2 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Lhx9Q9WUH2 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Lhx9Q9WUH2 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
Lhx9Q9WUH2 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Lhx9Q9WUH2 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Lhx9Q9WUH2 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
Lhx9Q9WUH2 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Lhx9Q9WUH2 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Lhx9Q9WUH2 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Lhx9Q9WUH2 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC16.49■□□□□ 0.23
Lhx9Q9WUH2 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC16.49■□□□□ 0.23
Lhx9Q9WUH2 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Lhx9Q9WUH2 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Lhx9Q9WUH2 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Lhx9Q9WUH2 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Lhx9Q9WUH2 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Lhx9Q9WUH2 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Lhx9Q9WUH2 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Lhx9Q9WUH2 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Lhx9Q9WUH2 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Lhx9Q9WUH2 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Lhx9Q9WUH2 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Lhx9Q9WUH2 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC16.48■□□□□ 0.23
Lhx9Q9WUH2 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Lhx9Q9WUH2 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Lhx9Q9WUH2 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC16.48■□□□□ 0.23
Lhx9Q9WUH2 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC16.48■□□□□ 0.23
Lhx9Q9WUH2 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
Lhx9Q9WUH2 Gm4974-201ENSMUST00000209974 875 ntBASIC16.48■□□□□ 0.23
Lhx9Q9WUH2 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
Lhx9Q9WUH2 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC16.48■□□□□ 0.23
Lhx9Q9WUH2 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Lhx9Q9WUH2 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Lhx9Q9WUH2 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Lhx9Q9WUH2 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Lhx9Q9WUH2 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Lhx9Q9WUH2 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC16.48■□□□□ 0.23
Lhx9Q9WUH2 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Lhx9Q9WUH2 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Lhx9Q9WUH2 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
Lhx9Q9WUH2 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC16.47■□□□□ 0.23
Lhx9Q9WUH2 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Lhx9Q9WUH2 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
Lhx9Q9WUH2 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Lhx9Q9WUH2 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Lhx9Q9WUH2 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Lhx9Q9WUH2 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC16.47■□□□□ 0.23
Lhx9Q9WUH2 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Lhx9Q9WUH2 Gm6659-201ENSMUST00000174752 547 ntBASIC16.47■□□□□ 0.23
Lhx9Q9WUH2 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC16.47■□□□□ 0.23
Lhx9Q9WUH2 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Lhx9Q9WUH2 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Lhx9Q9WUH2 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
Lhx9Q9WUH2 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Lhx9Q9WUH2 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Lhx9Q9WUH2 Gm37519-201ENSMUST00000191687 2210 ntBASIC16.47■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 36.6 ms