Protein–RNA interactions for Protein: Q9WTN0

Ggps1, Geranylgeranyl pyrophosphate synthase, mousemouse

Predictions only

Length 300 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ggps1Q9WTN0 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ggps1Q9WTN0 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC19.25■□□□□ 0.67
Ggps1Q9WTN0 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC19.25■□□□□ 0.67
Ggps1Q9WTN0 Ank2-226ENSMUST00000189368 339 ntBASIC19.25■□□□□ 0.67
Ggps1Q9WTN0 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ggps1Q9WTN0 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC19.25■□□□□ 0.67
Ggps1Q9WTN0 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Ggps1Q9WTN0 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ggps1Q9WTN0 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ggps1Q9WTN0 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC19.25■□□□□ 0.67
Ggps1Q9WTN0 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Ggps1Q9WTN0 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Ggps1Q9WTN0 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ggps1Q9WTN0 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ggps1Q9WTN0 Gm9013-201ENSMUST00000132939 882 ntBASIC19.24■□□□□ 0.67
Ggps1Q9WTN0 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Ggps1Q9WTN0 Gm3272-201ENSMUST00000181181 1229 ntBASIC19.24■□□□□ 0.67
Ggps1Q9WTN0 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ggps1Q9WTN0 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ggps1Q9WTN0 Gm10566-201ENSMUST00000086739 996 ntBASIC19.24■□□□□ 0.67
Ggps1Q9WTN0 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ggps1Q9WTN0 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ggps1Q9WTN0 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC19.24■□□□□ 0.67
Ggps1Q9WTN0 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ggps1Q9WTN0 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Ggps1Q9WTN0 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Ggps1Q9WTN0 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ggps1Q9WTN0 Gm43272-201ENSMUST00000200599 1584 ntBASIC19.23■□□□□ 0.67
Ggps1Q9WTN0 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ggps1Q9WTN0 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ggps1Q9WTN0 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ggps1Q9WTN0 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Ggps1Q9WTN0 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ggps1Q9WTN0 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC19.23■□□□□ 0.67
Ggps1Q9WTN0 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Ggps1Q9WTN0 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Ggps1Q9WTN0 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Ggps1Q9WTN0 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ggps1Q9WTN0 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ggps1Q9WTN0 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ggps1Q9WTN0 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ggps1Q9WTN0 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ggps1Q9WTN0 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ggps1Q9WTN0 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ggps1Q9WTN0 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
Ggps1Q9WTN0 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ggps1Q9WTN0 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC19.22■□□□□ 0.67
Ggps1Q9WTN0 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ggps1Q9WTN0 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ggps1Q9WTN0 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ggps1Q9WTN0 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC19.22■□□□□ 0.67
Ggps1Q9WTN0 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ggps1Q9WTN0 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ggps1Q9WTN0 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ggps1Q9WTN0 Grk6-206ENSMUST00000224995 2971 ntBASIC19.22■□□□□ 0.67
Ggps1Q9WTN0 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Ggps1Q9WTN0 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Ggps1Q9WTN0 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ggps1Q9WTN0 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ggps1Q9WTN0 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Ggps1Q9WTN0 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ggps1Q9WTN0 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ggps1Q9WTN0 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Ggps1Q9WTN0 Gm9103-201ENSMUST00000119371 405 ntBASIC19.21■□□□□ 0.67
Ggps1Q9WTN0 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC19.21■□□□□ 0.67
Ggps1Q9WTN0 Gm29518-201ENSMUST00000190858 372 ntBASIC19.21■□□□□ 0.67
Ggps1Q9WTN0 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Ggps1Q9WTN0 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC19.21■□□□□ 0.67
Ggps1Q9WTN0 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ggps1Q9WTN0 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ggps1Q9WTN0 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ggps1Q9WTN0 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC19.21■□□□□ 0.67
Ggps1Q9WTN0 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ggps1Q9WTN0 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC19.21■□□□□ 0.67
Ggps1Q9WTN0 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ggps1Q9WTN0 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ggps1Q9WTN0 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ggps1Q9WTN0 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Ggps1Q9WTN0 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Ggps1Q9WTN0 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ggps1Q9WTN0 Gm19721-201ENSMUST00000195284 1764 ntBASIC19.2■□□□□ 0.66
Ggps1Q9WTN0 Gm11355-201ENSMUST00000121120 306 ntBASIC19.2■□□□□ 0.66
Ggps1Q9WTN0 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ggps1Q9WTN0 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ggps1Q9WTN0 Gm26039-201ENSMUST00000158152 144 ntBASIC19.2■□□□□ 0.66
Ggps1Q9WTN0 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Ggps1Q9WTN0 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ggps1Q9WTN0 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ggps1Q9WTN0 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Ggps1Q9WTN0 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ggps1Q9WTN0 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ggps1Q9WTN0 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC19.19■□□□□ 0.66
Ggps1Q9WTN0 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ggps1Q9WTN0 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ggps1Q9WTN0 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ggps1Q9WTN0 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ggps1Q9WTN0 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ggps1Q9WTN0 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ggps1Q9WTN0 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
Ggps1Q9WTN0 Gm27704-201ENSMUST00000185094 107 ntBASIC19.19■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 24.3 ms