Protein–RNA interactions for Protein: Q9R194

Cry2, Cryptochrome-2, mousemouse

Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cry2Q9R194 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Cry2Q9R194 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Cry2Q9R194 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Cry2Q9R194 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
Cry2Q9R194 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Cry2Q9R194 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Cry2Q9R194 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Cry2Q9R194 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Cry2Q9R194 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
Cry2Q9R194 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Cry2Q9R194 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Cry2Q9R194 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Cry2Q9R194 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC19.79■□□□□ 0.76
Cry2Q9R194 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Cry2Q9R194 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC19.79■□□□□ 0.76
Cry2Q9R194 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Cry2Q9R194 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC19.79■□□□□ 0.76
Cry2Q9R194 AC153889.1-201ENSMUST00000219257 330 ntBASIC19.79■□□□□ 0.76
Cry2Q9R194 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC19.79■□□□□ 0.76
Cry2Q9R194 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC19.79■□□□□ 0.76
Cry2Q9R194 Zkscan4-202ENSMUST00000225845 1506 ntBASIC19.79■□□□□ 0.76
Cry2Q9R194 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
Cry2Q9R194 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC19.79■□□□□ 0.76
Cry2Q9R194 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Cry2Q9R194 Gm38342-201ENSMUST00000195710 2980 ntBASIC19.79■□□□□ 0.76
Cry2Q9R194 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Cry2Q9R194 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Cry2Q9R194 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Cry2Q9R194 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Cry2Q9R194 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
Cry2Q9R194 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Cry2Q9R194 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Cry2Q9R194 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Cry2Q9R194 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Cry2Q9R194 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Cry2Q9R194 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Cry2Q9R194 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Cry2Q9R194 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Cry2Q9R194 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Cry2Q9R194 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC19.78■□□□□ 0.76
Cry2Q9R194 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC19.78■□□□□ 0.76
Cry2Q9R194 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Cry2Q9R194 AC125350.1-201ENSMUST00000225115 903 ntBASIC19.78■□□□□ 0.76
Cry2Q9R194 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC19.78■□□□□ 0.76
Cry2Q9R194 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Cry2Q9R194 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Cry2Q9R194 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC19.78■□□□□ 0.76
Cry2Q9R194 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Cry2Q9R194 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Cry2Q9R194 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Cry2Q9R194 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Cry2Q9R194 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
Cry2Q9R194 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC19.77■□□□□ 0.76
Cry2Q9R194 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Cry2Q9R194 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC19.77■□□□□ 0.76
Cry2Q9R194 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Cry2Q9R194 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
Cry2Q9R194 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Cry2Q9R194 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Cry2Q9R194 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Cry2Q9R194 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Cry2Q9R194 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
Cry2Q9R194 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Cry2Q9R194 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Cry2Q9R194 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Cry2Q9R194 Mir8098-201ENSMUST00000184011 137 ntBASIC19.76■□□□□ 0.75
Cry2Q9R194 Gm43514-201ENSMUST00000198852 424 ntBASIC19.76■□□□□ 0.75
Cry2Q9R194 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Cry2Q9R194 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC19.76■□□□□ 0.75
Cry2Q9R194 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
Cry2Q9R194 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Cry2Q9R194 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
Cry2Q9R194 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Cry2Q9R194 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Cry2Q9R194 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Cry2Q9R194 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Cry2Q9R194 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Cry2Q9R194 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
Cry2Q9R194 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Cry2Q9R194 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Cry2Q9R194 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Cry2Q9R194 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Cry2Q9R194 Gm13884-201ENSMUST00000118103 829 ntBASIC19.75■□□□□ 0.75
Cry2Q9R194 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC19.75■□□□□ 0.75
Cry2Q9R194 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
Cry2Q9R194 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
Cry2Q9R194 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC19.75■□□□□ 0.75
Cry2Q9R194 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Cry2Q9R194 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Cry2Q9R194 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Cry2Q9R194 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Cry2Q9R194 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Cry2Q9R194 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Cry2Q9R194 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Cry2Q9R194 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Cry2Q9R194 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Cry2Q9R194 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC19.74■□□□□ 0.75
Cry2Q9R194 Gm15372-201ENSMUST00000120729 834 ntBASIC19.74■□□□□ 0.75
Cry2Q9R194 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC19.74■□□□□ 0.75
Cry2Q9R194 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 18.2 ms