Protein–RNA interactions for Protein: Q9R060

Nubp1, Cytosolic Fe-S cluster assembly factor NUBP1, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nubp1Q9R060 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Nubp1Q9R060 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Nubp1Q9R060 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Nubp1Q9R060 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Nubp1Q9R060 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Nubp1Q9R060 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Nubp1Q9R060 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Nubp1Q9R060 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC15.14■□□□□ 0.01
Nubp1Q9R060 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Nubp1Q9R060 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Nubp1Q9R060 Gm27357-201ENSMUST00000183754 135 ntBASIC15.14■□□□□ 0.01
Nubp1Q9R060 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC15.14■□□□□ 0.01
Nubp1Q9R060 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Nubp1Q9R060 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Nubp1Q9R060 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Nubp1Q9R060 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Nubp1Q9R060 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Nubp1Q9R060 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Nubp1Q9R060 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Nubp1Q9R060 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Nubp1Q9R060 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Nubp1Q9R060 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Nubp1Q9R060 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Nubp1Q9R060 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC15.14■□□□□ 0.01
Nubp1Q9R060 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Nubp1Q9R060 Ddx41-204ENSMUST00000224765 2199 ntBASIC15.14■□□□□ 0.01
Nubp1Q9R060 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Nubp1Q9R060 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Nubp1Q9R060 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Nubp1Q9R060 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Nubp1Q9R060 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC15.13■□□□□ 0.01
Nubp1Q9R060 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Nubp1Q9R060 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Nubp1Q9R060 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Nubp1Q9R060 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Nubp1Q9R060 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Nubp1Q9R060 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Nubp1Q9R060 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Nubp1Q9R060 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Nubp1Q9R060 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC15.13■□□□□ 0.01
Nubp1Q9R060 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Nubp1Q9R060 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Nubp1Q9R060 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Nubp1Q9R060 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Nubp1Q9R060 Gm19324-201ENSMUST00000213229 1169 ntBASIC15.13■□□□□ 0.01
Nubp1Q9R060 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Nubp1Q9R060 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Nubp1Q9R060 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Nubp1Q9R060 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Nubp1Q9R060 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Nubp1Q9R060 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Nubp1Q9R060 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Nubp1Q9R060 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Nubp1Q9R060 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Nubp1Q9R060 Gm10461-201ENSMUST00000202073 4786 ntBASIC15.13■□□□□ 0.01
Nubp1Q9R060 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Nubp1Q9R060 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Nubp1Q9R060 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Nubp1Q9R060 Gm44544-201ENSMUST00000207052 1844 ntBASIC15.13■□□□□ 0.01
Nubp1Q9R060 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Nubp1Q9R060 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Nubp1Q9R060 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Nubp1Q9R060 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Nubp1Q9R060 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Nubp1Q9R060 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Nubp1Q9R060 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Nubp1Q9R060 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Nubp1Q9R060 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC15.12■□□□□ 0.01
Nubp1Q9R060 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Nubp1Q9R060 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Nubp1Q9R060 Gm17808-201ENSMUST00000200859 894 ntBASIC15.12■□□□□ 0.01
Nubp1Q9R060 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC15.12■□□□□ 0.01
Nubp1Q9R060 Gm2594-201ENSMUST00000214774 742 ntBASIC15.12■□□□□ 0.01
Nubp1Q9R060 Mzt1-203ENSMUST00000227948 952 ntBASIC15.12■□□□□ 0.01
Nubp1Q9R060 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Nubp1Q9R060 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Nubp1Q9R060 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Nubp1Q9R060 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Nubp1Q9R060 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Nubp1Q9R060 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Nubp1Q9R060 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Nubp1Q9R060 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Nubp1Q9R060 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Nubp1Q9R060 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Nubp1Q9R060 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Nubp1Q9R060 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC15.12■□□□□ 0.01
Nubp1Q9R060 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Nubp1Q9R060 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC15.12■□□□□ 0.01
Nubp1Q9R060 Fam105a-203ENSMUST00000226170 3043 ntBASIC15.11■□□□□ 0.01
Nubp1Q9R060 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Nubp1Q9R060 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Nubp1Q9R060 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Nubp1Q9R060 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Nubp1Q9R060 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Nubp1Q9R060 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Nubp1Q9R060 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Nubp1Q9R060 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Nubp1Q9R060 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Nubp1Q9R060 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Nubp1Q9R060 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC15.11■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms