Protein–RNA interactions for Protein: Q9QWF0

Chaf1a, Chromatin assembly factor 1 subunit A, mousemouse

Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chaf1aQ9QWF0 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Chaf1aQ9QWF0 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Chaf1aQ9QWF0 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Chaf1aQ9QWF0 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Chaf1aQ9QWF0 Gm27405-201ENSMUST00000184201 112 ntBASIC19.44■□□□□ 0.7
Chaf1aQ9QWF0 Gm26524-201ENSMUST00000192339 390 ntBASIC19.44■□□□□ 0.7
Chaf1aQ9QWF0 AC164629.5-201ENSMUST00000220387 632 ntBASIC19.44■□□□□ 0.7
Chaf1aQ9QWF0 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
Chaf1aQ9QWF0 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Chaf1aQ9QWF0 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
Chaf1aQ9QWF0 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
Chaf1aQ9QWF0 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Chaf1aQ9QWF0 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC19.44■□□□□ 0.7
Chaf1aQ9QWF0 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Chaf1aQ9QWF0 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC19.43■□□□□ 0.7
Chaf1aQ9QWF0 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Chaf1aQ9QWF0 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Chaf1aQ9QWF0 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Chaf1aQ9QWF0 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC19.43■□□□□ 0.7
Chaf1aQ9QWF0 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Chaf1aQ9QWF0 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC19.43■□□□□ 0.7
Chaf1aQ9QWF0 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC19.43■□□□□ 0.7
Chaf1aQ9QWF0 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Chaf1aQ9QWF0 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Chaf1aQ9QWF0 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Chaf1aQ9QWF0 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Chaf1aQ9QWF0 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Chaf1aQ9QWF0 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC19.43■□□□□ 0.7
Chaf1aQ9QWF0 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
Chaf1aQ9QWF0 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Chaf1aQ9QWF0 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Chaf1aQ9QWF0 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Chaf1aQ9QWF0 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Chaf1aQ9QWF0 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
Chaf1aQ9QWF0 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Chaf1aQ9QWF0 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Chaf1aQ9QWF0 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Chaf1aQ9QWF0 Gm38285-201ENSMUST00000192928 922 ntBASIC19.42■□□□□ 0.7
Chaf1aQ9QWF0 Gm44549-201ENSMUST00000208351 577 ntBASIC19.42■□□□□ 0.7
Chaf1aQ9QWF0 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC19.42■□□□□ 0.7
Chaf1aQ9QWF0 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Chaf1aQ9QWF0 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Chaf1aQ9QWF0 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Chaf1aQ9QWF0 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC19.42■□□□□ 0.7
Chaf1aQ9QWF0 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Chaf1aQ9QWF0 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Chaf1aQ9QWF0 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Chaf1aQ9QWF0 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Chaf1aQ9QWF0 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Chaf1aQ9QWF0 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Chaf1aQ9QWF0 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Chaf1aQ9QWF0 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Chaf1aQ9QWF0 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC19.41■□□□□ 0.7
Chaf1aQ9QWF0 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Chaf1aQ9QWF0 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Chaf1aQ9QWF0 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC19.41■□□□□ 0.7
Chaf1aQ9QWF0 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Chaf1aQ9QWF0 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Chaf1aQ9QWF0 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Chaf1aQ9QWF0 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Chaf1aQ9QWF0 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Chaf1aQ9QWF0 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC19.41■□□□□ 0.7
Chaf1aQ9QWF0 Mir5133-201ENSMUST00000174955 77 ntBASIC19.41■□□□□ 0.7
Chaf1aQ9QWF0 Gm8969-201ENSMUST00000199694 526 ntBASIC19.41■□□□□ 0.7
Chaf1aQ9QWF0 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Chaf1aQ9QWF0 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Chaf1aQ9QWF0 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC19.41■□□□□ 0.7
Chaf1aQ9QWF0 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC19.41■□□□□ 0.7
Chaf1aQ9QWF0 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Chaf1aQ9QWF0 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
Chaf1aQ9QWF0 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Chaf1aQ9QWF0 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Chaf1aQ9QWF0 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Chaf1aQ9QWF0 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Chaf1aQ9QWF0 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC19.4■□□□□ 0.7
Chaf1aQ9QWF0 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Chaf1aQ9QWF0 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Chaf1aQ9QWF0 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Chaf1aQ9QWF0 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC19.4■□□□□ 0.7
Chaf1aQ9QWF0 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC19.4■□□□□ 0.7
Chaf1aQ9QWF0 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Chaf1aQ9QWF0 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Chaf1aQ9QWF0 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC19.4■□□□□ 0.7
Chaf1aQ9QWF0 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Chaf1aQ9QWF0 Wnt10b-205ENSMUST00000226846 1204 ntBASIC19.4■□□□□ 0.7
Chaf1aQ9QWF0 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Chaf1aQ9QWF0 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Chaf1aQ9QWF0 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC19.4■□□□□ 0.7
Chaf1aQ9QWF0 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Chaf1aQ9QWF0 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Chaf1aQ9QWF0 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
Chaf1aQ9QWF0 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Chaf1aQ9QWF0 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Chaf1aQ9QWF0 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC19.4■□□□□ 0.7
Chaf1aQ9QWF0 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Chaf1aQ9QWF0 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
Chaf1aQ9QWF0 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Chaf1aQ9QWF0 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Chaf1aQ9QWF0 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.7
Chaf1aQ9QWF0 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 22.1 ms