Protein–RNA interactions for Protein: Q9JLR1

Sec61a2, Protein transport protein Sec61 subunit alpha isoform 2, mousemouse

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a2Q9JLR1 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Sec61a2Q9JLR1 Idnk-204ENSMUST00000226010 1898 ntBASIC15.65■□□□□ 0.1
Sec61a2Q9JLR1 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Sec61a2Q9JLR1 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Sec61a2Q9JLR1 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Sec61a2Q9JLR1 Gm43702-201ENSMUST00000198772 2546 ntBASIC15.64■□□□□ 0.09
Sec61a2Q9JLR1 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
Sec61a2Q9JLR1 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Sec61a2Q9JLR1 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Sec61a2Q9JLR1 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Sec61a2Q9JLR1 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
Sec61a2Q9JLR1 Mtag2-201ENSMUST00000058665 714 ntBASIC15.64■□□□□ 0.09
Sec61a2Q9JLR1 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Sec61a2Q9JLR1 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Sec61a2Q9JLR1 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Sec61a2Q9JLR1 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC15.64■□□□□ 0.09
Sec61a2Q9JLR1 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Sec61a2Q9JLR1 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Sec61a2Q9JLR1 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Sec61a2Q9JLR1 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Sec61a2Q9JLR1 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC15.63■□□□□ 0.09
Sec61a2Q9JLR1 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Sec61a2Q9JLR1 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC15.63■□□□□ 0.09
Sec61a2Q9JLR1 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Sec61a2Q9JLR1 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Sec61a2Q9JLR1 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Sec61a2Q9JLR1 AC108858.1-201ENSMUST00000228461 1498 ntBASIC15.63■□□□□ 0.09
Sec61a2Q9JLR1 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Sec61a2Q9JLR1 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
Sec61a2Q9JLR1 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Sec61a2Q9JLR1 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Sec61a2Q9JLR1 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC15.62■□□□□ 0.09
Sec61a2Q9JLR1 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Sec61a2Q9JLR1 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Sec61a2Q9JLR1 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Sec61a2Q9JLR1 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Sec61a2Q9JLR1 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Sec61a2Q9JLR1 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Sec61a2Q9JLR1 Gm13168-201ENSMUST00000121771 632 ntBASIC15.62■□□□□ 0.09
Sec61a2Q9JLR1 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
Sec61a2Q9JLR1 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Sec61a2Q9JLR1 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Sec61a2Q9JLR1 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Sec61a2Q9JLR1 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC15.62■□□□□ 0.09
Sec61a2Q9JLR1 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
Sec61a2Q9JLR1 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
Sec61a2Q9JLR1 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Sec61a2Q9JLR1 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Sec61a2Q9JLR1 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Sec61a2Q9JLR1 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Sec61a2Q9JLR1 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
Sec61a2Q9JLR1 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Sec61a2Q9JLR1 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Sec61a2Q9JLR1 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Sec61a2Q9JLR1 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
Sec61a2Q9JLR1 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Sec61a2Q9JLR1 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
Sec61a2Q9JLR1 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
Sec61a2Q9JLR1 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Sec61a2Q9JLR1 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Sec61a2Q9JLR1 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Sec61a2Q9JLR1 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Sec61a2Q9JLR1 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
Sec61a2Q9JLR1 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Sec61a2Q9JLR1 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Sec61a2Q9JLR1 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Sec61a2Q9JLR1 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Sec61a2Q9JLR1 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
Sec61a2Q9JLR1 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Sec61a2Q9JLR1 Gm21596-201ENSMUST00000178049 1316 ntBASIC15.61■□□□□ 0.09
Sec61a2Q9JLR1 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC15.61■□□□□ 0.09
Sec61a2Q9JLR1 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Sec61a2Q9JLR1 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Sec61a2Q9JLR1 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Sec61a2Q9JLR1 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Sec61a2Q9JLR1 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Sec61a2Q9JLR1 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Sec61a2Q9JLR1 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Sec61a2Q9JLR1 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Sec61a2Q9JLR1 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC15.6■□□□□ 0.09
Sec61a2Q9JLR1 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC15.6■□□□□ 0.09
Sec61a2Q9JLR1 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Sec61a2Q9JLR1 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
Sec61a2Q9JLR1 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Sec61a2Q9JLR1 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Sec61a2Q9JLR1 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Sec61a2Q9JLR1 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
Sec61a2Q9JLR1 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Sec61a2Q9JLR1 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
Sec61a2Q9JLR1 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Sec61a2Q9JLR1 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Sec61a2Q9JLR1 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Sec61a2Q9JLR1 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Sec61a2Q9JLR1 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Sec61a2Q9JLR1 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Sec61a2Q9JLR1 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Sec61a2Q9JLR1 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Sec61a2Q9JLR1 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Sec61a2Q9JLR1 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Sec61a2Q9JLR1 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 19.7 ms