Protein–RNA interactions for Protein: Q9JJX7

Tdp2, Tyrosyl-DNA phosphodiesterase 2, mousemouse

Predictions only

Length 370 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tdp2Q9JJX7 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Tdp2Q9JJX7 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Tdp2Q9JJX7 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC17.13■□□□□ 0.33
Tdp2Q9JJX7 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Tdp2Q9JJX7 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Tdp2Q9JJX7 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Tdp2Q9JJX7 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Tdp2Q9JJX7 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Tdp2Q9JJX7 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Tdp2Q9JJX7 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Tdp2Q9JJX7 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Tdp2Q9JJX7 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Tdp2Q9JJX7 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Tdp2Q9JJX7 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC17.12■□□□□ 0.33
Tdp2Q9JJX7 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC17.12■□□□□ 0.33
Tdp2Q9JJX7 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Tdp2Q9JJX7 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Tdp2Q9JJX7 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Tdp2Q9JJX7 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC17.12■□□□□ 0.33
Tdp2Q9JJX7 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Tdp2Q9JJX7 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Tdp2Q9JJX7 Gm16499-203ENSMUST00000204633 2177 ntBASIC17.12■□□□□ 0.33
Tdp2Q9JJX7 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Tdp2Q9JJX7 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Tdp2Q9JJX7 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC17.11■□□□□ 0.33
Tdp2Q9JJX7 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Tdp2Q9JJX7 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Tdp2Q9JJX7 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Tdp2Q9JJX7 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Tdp2Q9JJX7 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC17.11■□□□□ 0.33
Tdp2Q9JJX7 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Tdp2Q9JJX7 AC122769.4-201ENSMUST00000228166 901 ntBASIC17.11■□□□□ 0.33
Tdp2Q9JJX7 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Tdp2Q9JJX7 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Tdp2Q9JJX7 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Tdp2Q9JJX7 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Tdp2Q9JJX7 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Tdp2Q9JJX7 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Tdp2Q9JJX7 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Tdp2Q9JJX7 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
Tdp2Q9JJX7 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Tdp2Q9JJX7 Flg-201ENSMUST00000050758 1488 ntBASIC17.11■□□□□ 0.33
Tdp2Q9JJX7 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Tdp2Q9JJX7 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Tdp2Q9JJX7 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Tdp2Q9JJX7 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Tdp2Q9JJX7 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Tdp2Q9JJX7 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Tdp2Q9JJX7 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Tdp2Q9JJX7 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Tdp2Q9JJX7 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Tdp2Q9JJX7 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Tdp2Q9JJX7 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC17.1■□□□□ 0.33
Tdp2Q9JJX7 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
Tdp2Q9JJX7 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC17.1■□□□□ 0.33
Tdp2Q9JJX7 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
Tdp2Q9JJX7 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
Tdp2Q9JJX7 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC17.1■□□□□ 0.33
Tdp2Q9JJX7 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
Tdp2Q9JJX7 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Tdp2Q9JJX7 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Tdp2Q9JJX7 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Tdp2Q9JJX7 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Tdp2Q9JJX7 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
Tdp2Q9JJX7 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Tdp2Q9JJX7 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Tdp2Q9JJX7 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Tdp2Q9JJX7 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Tdp2Q9JJX7 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Tdp2Q9JJX7 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Tdp2Q9JJX7 Gm11841-201ENSMUST00000117060 1963 ntBASIC17.09■□□□□ 0.33
Tdp2Q9JJX7 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Tdp2Q9JJX7 Gm28265-201ENSMUST00000188201 2319 ntBASIC17.09■□□□□ 0.33
Tdp2Q9JJX7 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Tdp2Q9JJX7 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Tdp2Q9JJX7 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Tdp2Q9JJX7 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Tdp2Q9JJX7 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC17.09■□□□□ 0.33
Tdp2Q9JJX7 Gm26524-201ENSMUST00000192339 390 ntBASIC17.09■□□□□ 0.33
Tdp2Q9JJX7 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC17.09■□□□□ 0.33
Tdp2Q9JJX7 Gm44672-201ENSMUST00000206944 1098 ntBASIC17.09■□□□□ 0.33
Tdp2Q9JJX7 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC17.09■□□□□ 0.33
Tdp2Q9JJX7 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Tdp2Q9JJX7 Gm10812-201ENSMUST00000099864 546 ntBASIC17.09■□□□□ 0.33
Tdp2Q9JJX7 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Tdp2Q9JJX7 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Tdp2Q9JJX7 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Tdp2Q9JJX7 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Tdp2Q9JJX7 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Tdp2Q9JJX7 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Tdp2Q9JJX7 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Tdp2Q9JJX7 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Tdp2Q9JJX7 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Tdp2Q9JJX7 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Tdp2Q9JJX7 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Tdp2Q9JJX7 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Tdp2Q9JJX7 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Tdp2Q9JJX7 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC17.08■□□□□ 0.32
Tdp2Q9JJX7 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Tdp2Q9JJX7 Gm13216-201ENSMUST00000117145 591 ntBASIC17.08■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 19 ms