Protein–RNA interactions for Protein: Q9JJ43

Rbfox1, RNA binding protein fox-1 homolog 1, mousemouse

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rbfox1Q9JJ43 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Rbfox1Q9JJ43 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Rbfox1Q9JJ43 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC14.8□□□□□ -0.04
Rbfox1Q9JJ43 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Rbfox1Q9JJ43 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC14.8□□□□□ -0.04
Rbfox1Q9JJ43 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Rbfox1Q9JJ43 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Rbfox1Q9JJ43 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Rbfox1Q9JJ43 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Rbfox1Q9JJ43 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC14.8□□□□□ -0.04
Rbfox1Q9JJ43 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Rbfox1Q9JJ43 Gm28265-201ENSMUST00000188201 2319 ntBASIC14.8□□□□□ -0.04
Rbfox1Q9JJ43 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Rbfox1Q9JJ43 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Rbfox1Q9JJ43 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Rbfox1Q9JJ43 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Rbfox1Q9JJ43 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Rbfox1Q9JJ43 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC14.79□□□□□ -0.04
Rbfox1Q9JJ43 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Rbfox1Q9JJ43 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Rbfox1Q9JJ43 Mir5133-201ENSMUST00000174955 77 ntBASIC14.79□□□□□ -0.04
Rbfox1Q9JJ43 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Rbfox1Q9JJ43 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Rbfox1Q9JJ43 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC14.79□□□□□ -0.04
Rbfox1Q9JJ43 Gm42569-201ENSMUST00000200539 472 ntBASIC14.79□□□□□ -0.04
Rbfox1Q9JJ43 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Rbfox1Q9JJ43 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Rbfox1Q9JJ43 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Rbfox1Q9JJ43 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Rbfox1Q9JJ43 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Rbfox1Q9JJ43 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC14.79□□□□□ -0.04
Rbfox1Q9JJ43 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rbfox1Q9JJ43 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rbfox1Q9JJ43 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rbfox1Q9JJ43 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Rbfox1Q9JJ43 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rbfox1Q9JJ43 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rbfox1Q9JJ43 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rbfox1Q9JJ43 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rbfox1Q9JJ43 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC14.78□□□□□ -0.04
Rbfox1Q9JJ43 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Rbfox1Q9JJ43 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rbfox1Q9JJ43 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Rbfox1Q9JJ43 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Rbfox1Q9JJ43 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Rbfox1Q9JJ43 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC14.78□□□□□ -0.04
Rbfox1Q9JJ43 Gm15847-201ENSMUST00000121417 1065 ntBASIC14.78□□□□□ -0.04
Rbfox1Q9JJ43 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rbfox1Q9JJ43 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rbfox1Q9JJ43 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC14.78□□□□□ -0.04
Rbfox1Q9JJ43 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Rbfox1Q9JJ43 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC14.78□□□□□ -0.04
Rbfox1Q9JJ43 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC14.78□□□□□ -0.04
Rbfox1Q9JJ43 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rbfox1Q9JJ43 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rbfox1Q9JJ43 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC14.78□□□□□ -0.04
Rbfox1Q9JJ43 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
Rbfox1Q9JJ43 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rbfox1Q9JJ43 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rbfox1Q9JJ43 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rbfox1Q9JJ43 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Rbfox1Q9JJ43 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rbfox1Q9JJ43 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC14.78□□□□□ -0.04
Rbfox1Q9JJ43 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rbfox1Q9JJ43 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rbfox1Q9JJ43 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
Rbfox1Q9JJ43 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Rbfox1Q9JJ43 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
Rbfox1Q9JJ43 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Rbfox1Q9JJ43 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
Rbfox1Q9JJ43 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Rbfox1Q9JJ43 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Rbfox1Q9JJ43 Gm13148-201ENSMUST00000118892 745 ntBASIC14.77□□□□□ -0.05
Rbfox1Q9JJ43 Gm26571-201ENSMUST00000181399 666 ntBASIC14.77□□□□□ -0.05
Rbfox1Q9JJ43 Gm8495-201ENSMUST00000188740 694 ntBASIC14.77□□□□□ -0.05
Rbfox1Q9JJ43 Gm10138-203ENSMUST00000206952 366 ntBASIC14.77□□□□□ -0.05
Rbfox1Q9JJ43 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Rbfox1Q9JJ43 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Rbfox1Q9JJ43 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Rbfox1Q9JJ43 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
Rbfox1Q9JJ43 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Rbfox1Q9JJ43 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Rbfox1Q9JJ43 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Rbfox1Q9JJ43 Gm16401-202ENSMUST00000197463 2074 ntBASIC14.77□□□□□ -0.05
Rbfox1Q9JJ43 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Rbfox1Q9JJ43 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Rbfox1Q9JJ43 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Rbfox1Q9JJ43 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Rbfox1Q9JJ43 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
Rbfox1Q9JJ43 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Rbfox1Q9JJ43 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Rbfox1Q9JJ43 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Rbfox1Q9JJ43 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Rbfox1Q9JJ43 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Rbfox1Q9JJ43 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Rbfox1Q9JJ43 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
Rbfox1Q9JJ43 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
Rbfox1Q9JJ43 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC14.76□□□□□ -0.05
Rbfox1Q9JJ43 Gm12933-201ENSMUST00000120203 872 ntBASIC14.76□□□□□ -0.05
Rbfox1Q9JJ43 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms