Protein–RNA interactions for Protein: Q9JIL2

Ccl28, C-C motif chemokine 28, mousemouse

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl28Q9JIL2 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ccl28Q9JIL2 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ccl28Q9JIL2 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ccl28Q9JIL2 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ccl28Q9JIL2 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ccl28Q9JIL2 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Ccl28Q9JIL2 Gm29791-202ENSMUST00000207888 369 ntBASIC14.05□□□□□ -0.16
Ccl28Q9JIL2 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Ccl28Q9JIL2 Wnt10b-205ENSMUST00000226846 1204 ntBASIC14.05□□□□□ -0.16
Ccl28Q9JIL2 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ccl28Q9JIL2 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Ccl28Q9JIL2 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ccl28Q9JIL2 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ccl28Q9JIL2 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ccl28Q9JIL2 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ccl28Q9JIL2 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ccl28Q9JIL2 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ccl28Q9JIL2 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ccl28Q9JIL2 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ccl28Q9JIL2 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC14.04□□□□□ -0.16
Ccl28Q9JIL2 Gm26524-201ENSMUST00000192339 390 ntBASIC14.04□□□□□ -0.16
Ccl28Q9JIL2 Rab3c-203ENSMUST00000224180 967 ntBASIC14.04□□□□□ -0.16
Ccl28Q9JIL2 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Ccl28Q9JIL2 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ccl28Q9JIL2 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Ccl28Q9JIL2 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ccl28Q9JIL2 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ccl28Q9JIL2 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ccl28Q9JIL2 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ccl28Q9JIL2 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ccl28Q9JIL2 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ccl28Q9JIL2 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ccl28Q9JIL2 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ccl28Q9JIL2 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ccl28Q9JIL2 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ccl28Q9JIL2 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ccl28Q9JIL2 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ccl28Q9JIL2 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Ccl28Q9JIL2 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC14.03□□□□□ -0.16
Ccl28Q9JIL2 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ccl28Q9JIL2 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ccl28Q9JIL2 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ccl28Q9JIL2 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ccl28Q9JIL2 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Ccl28Q9JIL2 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ccl28Q9JIL2 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ccl28Q9JIL2 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC14.03□□□□□ -0.16
Ccl28Q9JIL2 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC14.03□□□□□ -0.16
Ccl28Q9JIL2 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Ccl28Q9JIL2 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC14.03□□□□□ -0.16
Ccl28Q9JIL2 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ccl28Q9JIL2 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ccl28Q9JIL2 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC14.03□□□□□ -0.16
Ccl28Q9JIL2 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Ccl28Q9JIL2 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Ccl28Q9JIL2 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC14.03□□□□□ -0.16
Ccl28Q9JIL2 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC14.03□□□□□ -0.16
Ccl28Q9JIL2 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC14.03□□□□□ -0.16
Ccl28Q9JIL2 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Ccl28Q9JIL2 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ccl28Q9JIL2 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ccl28Q9JIL2 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ccl28Q9JIL2 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ccl28Q9JIL2 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC14.03□□□□□ -0.16
Ccl28Q9JIL2 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ccl28Q9JIL2 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ccl28Q9JIL2 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ccl28Q9JIL2 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ccl28Q9JIL2 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ccl28Q9JIL2 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ccl28Q9JIL2 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Ccl28Q9JIL2 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC14.02□□□□□ -0.16
Ccl28Q9JIL2 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Ccl28Q9JIL2 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ccl28Q9JIL2 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ccl28Q9JIL2 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ccl28Q9JIL2 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
Ccl28Q9JIL2 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC14.02□□□□□ -0.17
Ccl28Q9JIL2 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC14.02□□□□□ -0.17
Ccl28Q9JIL2 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ccl28Q9JIL2 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ccl28Q9JIL2 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
Ccl28Q9JIL2 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Ccl28Q9JIL2 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.17
Ccl28Q9JIL2 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC14.02□□□□□ -0.17
Ccl28Q9JIL2 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ccl28Q9JIL2 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ccl28Q9JIL2 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ccl28Q9JIL2 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC14.02□□□□□ -0.17
Ccl28Q9JIL2 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
Ccl28Q9JIL2 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Ccl28Q9JIL2 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ccl28Q9JIL2 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ccl28Q9JIL2 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ccl28Q9JIL2 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ccl28Q9JIL2 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC14.01□□□□□ -0.17
Ccl28Q9JIL2 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC14.01□□□□□ -0.17
Ccl28Q9JIL2 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC14.01□□□□□ -0.17
Ccl28Q9JIL2 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ccl28Q9JIL2 Gm12933-201ENSMUST00000120203 872 ntBASIC14.01□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms